RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 STRNO43815 780 aa13.77□□□□□ -0.21
SUPT4H1-203ENST00000579289 TAL1P17542 331 aaPredicted RBP13.77□□□□□ -0.21
SUPT4H1-203ENST00000579289 SHMT1P34896 483 aa13.77□□□□□ -0.21
SUPT4H1-203ENST00000579289 DYNLL1P63167 89 aaKnown RBP13.77□□□□□ -0.21
SUPT4H1-203ENST00000579289 ZYXQ15942 572 aaKnown RBP13.77□□□□□ -0.21
SUPT4H1-203ENST00000579289 PARP14Q460N5 1801 aa13.77□□□□□ -0.21
SUPT4H1-203ENST00000579289 TMEM240Q5SV17 173 aa13.77□□□□□ -0.21
SUPT4H1-203ENST00000579289 SHCBP1Q8NEM2 672 aa13.77□□□□□ -0.21
SUPT4H1-203ENST00000579289 MAML3Q96JK9 1138 aa13.77□□□□□ -0.21
SUPT4H1-203ENST00000579289 TOX2Q96NM4 488 aa13.77□□□□□ -0.21
SUPT4H1-203ENST00000579289 PRDM12Q9H4Q4 367 aa13.77□□□□□ -0.21
SUPT4H1-203ENST00000579289 THEGQ9P2T0 379 aa13.77□□□□□ -0.21
SUPT4H1-203ENST00000579289 A0A1W2PQ45 241 aaPredicted RBP13.76□□□□□ -0.21
SUPT4H1-203ENST00000579289 A0A1W2PQY0 241 aa13.76□□□□□ -0.21
SUPT4H1-203ENST00000579289 ZNF865P0CJ78 1059 aaPredicted RBP13.76□□□□□ -0.21
SUPT4H1-203ENST00000579289 ERCC3P19447 782 aa13.76□□□□□ -0.21
SUPT4H1-203ENST00000579289 EVX2Q03828 476 aa13.76□□□□□ -0.21
SUPT4H1-203ENST00000579289 FPGSQ05932 587 aa13.76□□□□□ -0.21
SUPT4H1-203ENST00000579289 SIAH1Q8IUQ4 282 aa13.76□□□□□ -0.21
SUPT4H1-203ENST00000579289 VWCEQ96DN2 955 aa13.76□□□□□ -0.21
SUPT4H1-203ENST00000579289 SPATC1LQ9H0A9 340 aa13.76□□□□□ -0.21
SUPT4H1-203ENST00000579289 RPAP3Q9H6T3 665 aaPredicted RBP13.76□□□□□ -0.21
SUPT4H1-203ENST00000579289 SAP30BPQ9UHR5 308 aaKnown RBP13.76□□□□□ -0.21
SUPT4H1-203ENST00000579289 AKAP2Q9Y2D5 859 aa13.76□□□□□ -0.21
SUPT4H1-203ENST00000579289 ZNFX1Q9P2E3 1918 aaKnown RBP13.76□□□□□ -0.21
SUPT4H1-203ENST00000579289 TCF20Q9UGU0 1960 aaKnown RBP13.75□□□□□ -0.21
SUPT4H1-203ENST00000579289 MYH1P12882 1939 aa13.75□□□□□ -0.21
SUPT4H1-203ENST00000579289 TIMP1P01033 207 aa13.75□□□□□ -0.21
SUPT4H1-203ENST00000579289 CDK7P50613 346 aa13.75□□□□□ -0.21
SUPT4H1-203ENST00000579289 MRPS5P82675 430 aaKnown RBP13.75□□□□□ -0.21
SUPT4H1-203ENST00000579289 GABPAQ06546 454 aa13.75□□□□□ -0.21
SUPT4H1-203ENST00000579289 WDR78Q5VTH9 848 aa13.75□□□□□ -0.21
SUPT4H1-203ENST00000579289 ABRAQ8N0Z2 381 aa13.75□□□□□ -0.21
SUPT4H1-203ENST00000579289 KLHDC9Q8NEP7 349 aa13.75□□□□□ -0.21
SUPT4H1-203ENST00000579289 EHD4Q9H223 541 aa13.75□□□□□ -0.21
SUPT4H1-203ENST00000579289 C11orf16Q9NQ32 467 aa13.75□□□□□ -0.21
SUPT4H1-203ENST00000579289 IVNS1ABPQ9Y6Y0 642 aa13.75□□□□□ -0.21
SUPT4H1-203ENST00000579289 PGK1P00558 417 aa13.74□□□□□ -0.21
SUPT4H1-203ENST00000579289 RAG1P15918 1043 aa13.74□□□□□ -0.21
SUPT4H1-203ENST00000579289 PLCD1P51178 756 aa13.74□□□□□ -0.21
SUPT4H1-203ENST00000579289 USP14P54578 494 aa13.74□□□□□ -0.21
SUPT4H1-203ENST00000579289 IRX5P78411 483 aaPredicted RBP13.74□□□□□ -0.21
SUPT4H1-203ENST00000579289 ALDH1L2Q3SY69 923 aa13.74□□□□□ -0.21
SUPT4H1-203ENST00000579289 NAA16Q6N069 864 aaPredicted RBP13.74□□□□□ -0.21
SUPT4H1-203ENST00000579289 DPP9Q86TI2 863 aa13.74□□□□□ -0.21
SUPT4H1-203ENST00000579289 CRACR2BQ8N4Y2 399 aaPredicted RBP13.74□□□□□ -0.21
SUPT4H1-203ENST00000579289 PPM1EQ8WY54 764 aa13.74□□□□□ -0.21
SUPT4H1-203ENST00000579289 LENG1Q96BZ8 264 aaPredicted RBP13.74□□□□□ -0.21
SUPT4H1-203ENST00000579289 NEUROD6Q96NK8 337 aa13.74□□□□□ -0.21
SUPT4H1-203ENST00000579289 LRFN3Q9BTN0 628 aa13.74□□□□□ -0.21
SUPT4H1-203ENST00000579289 EPHX3Q9H6B9 360 aa13.74□□□□□ -0.21
SUPT4H1-203ENST00000579289 PIH1D3Q9NQM4 214 aaKnown RBP13.74□□□□□ -0.21
SUPT4H1-203ENST00000579289 SNRKQ9NRH2 765 aa13.74□□□□□ -0.21
SUPT4H1-203ENST00000579289 NRBP1Q9UHY1 535 aa13.74□□□□□ -0.21
SUPT4H1-203ENST00000579289 GBF1Q92538 1859 aa13.74□□□□□ -0.21
SUPT4H1-203ENST00000579289 PQBP1O60828 265 aaKnown RBP13.73□□□□□ -0.21
SUPT4H1-203ENST00000579289 BAG3O95817 575 aa13.73□□□□□ -0.21
SUPT4H1-203ENST00000579289 PLCG2P16885 1265 aa13.73□□□□□ -0.21
SUPT4H1-203ENST00000579289 COG2Q14746 738 aa13.73□□□□□ -0.21
SUPT4H1-203ENST00000579289 ZNF792Q3KQV3 632 aa13.73□□□□□ -0.21
SUPT4H1-203ENST00000579289 MFSD5Q6N075 450 aa13.73□□□□□ -0.21
SUPT4H1-203ENST00000579289 TRMT2AQ8IZ69 625 aaKnown RBP13.73□□□□□ -0.21
SUPT4H1-203ENST00000579289 KHSRPQ92945 711 aaKnown RBP eCLIP13.73□□□□□ -0.21
SUPT4H1-203ENST00000579289 XPNPEP3Q9NQH7 507 aa13.73□□□□□ -0.21
SUPT4H1-203ENST00000579289 TMEM39AQ9NV64 488 aa13.73□□□□□ -0.21
SUPT4H1-203ENST00000579289 CXXC1Q9P0U4 656 aaPredicted RBP13.73□□□□□ -0.21
SUPT4H1-203ENST00000579289 LRP2BPQ9P2M1 347 aa13.73□□□□□ -0.21
SUPT4H1-203ENST00000579289 ADAMTS5Q9UNA0 930 aa13.73□□□□□ -0.21
SUPT4H1-203ENST00000579289 YBX2Q9Y2T7 364 aaKnown RBP13.73□□□□□ -0.21
SUPT4H1-203ENST00000579289 MYO9BQ13459 2157 aa13.73□□□□□ -0.21
SUPT4H1-203ENST00000579289 SRGAP3O43295 1099 aa13.72□□□□□ -0.21
SUPT4H1-203ENST00000579289 ADCY6O43306 1168 aa13.72□□□□□ -0.21
SUPT4H1-203ENST00000579289 DSG3P32926 999 aa13.72□□□□□ -0.21
SUPT4H1-203ENST00000579289 TFF2Q03403 129 aa13.72□□□□□ -0.21
SUPT4H1-203ENST00000579289 SLFN5Q08AF3 891 aa13.72□□□□□ -0.21
SUPT4H1-203ENST00000579289 CCDC85BQ15834 202 aaPredicted RBP13.72□□□□□ -0.21
SUPT4H1-203ENST00000579289 SLC44A5Q8NCS7 719 aa13.72□□□□□ -0.21
SUPT4H1-203ENST00000579289 PIEZO1Q92508 2521 aa13.72□□□□□ -0.21
SUPT4H1-203ENST00000579289 PNMA6EA0A0J9YXQ4 647 aa13.71□□□□□ -0.21
SUPT4H1-203ENST00000579289 MYADML2A6NDP7 307 aa13.71□□□□□ -0.21
SUPT4H1-203ENST00000579289 UQCRFS1P1P0C7P4 283 aa13.71□□□□□ -0.21
SUPT4H1-203ENST00000579289 TMEM132BQ14DG7 1078 aa13.71□□□□□ -0.21
SUPT4H1-203ENST00000579289 SEPT2Q15019 361 aa13.71□□□□□ -0.21
SUPT4H1-203ENST00000579289 RAB3GAP1Q15042 981 aa13.71□□□□□ -0.21
SUPT4H1-203ENST00000579289 ABCB5Q2M3G0 1257 aa13.71□□□□□ -0.21
SUPT4H1-203ENST00000579289 CERKLQ49MI3 558 aaPredicted RBP13.71□□□□□ -0.21
SUPT4H1-203ENST00000579289 ZNF512BQ96KM6 892 aaPredicted RBP13.71□□□□□ -0.21
SUPT4H1-203ENST00000579289 GAS2L1Q99501 681 aaPredicted RBP13.71□□□□□ -0.21
SUPT4H1-203ENST00000579289 TINF2Q9BSI4 451 aa13.71□□□□□ -0.21
SUPT4H1-203ENST00000579289 TSEN34Q9BSV6 310 aaKnown RBP13.71□□□□□ -0.21
SUPT4H1-203ENST00000579289 MROH8Q9H579 483 aa13.71□□□□□ -0.21
SUPT4H1-203ENST00000579289 CWC22Q9HCG8 908 aaKnown RBP13.71□□□□□ -0.21
SUPT4H1-203ENST00000579289 HOXC10Q9NYD6 342 aa13.71□□□□□ -0.21
SUPT4H1-203ENST00000579289 SERPINB13Q9UIV8 391 aa13.71□□□□□ -0.21
SUPT4H1-203ENST00000579289 NOB1Q9ULX3 412 aaKnown RBP13.71□□□□□ -0.21
SUPT4H1-203ENST00000579289 WDFY4Q6ZS81 3184 aa13.71□□□□□ -0.22
SUPT4H1-203ENST00000579289 COL11A1P12107 1806 aaPredicted RBP13.7□□□□□ -0.22
SUPT4H1-203ENST00000579289 CTAGE5O15320 804 aa13.7□□□□□ -0.22
SUPT4H1-203ENST00000579289 HLA-DOAP06340 250 aa13.7□□□□□ -0.22
SUPT4H1-203ENST00000579289 CSF2RAP15509 400 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms