RNA–Protein interactions for RNA: ENST00000579205.5

MSI2-207, Transcript of musashi RNA binding protein 2, humanhuman

TSL 4

Gene MSI2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-207ENST00000579205 TROAPQ12815 778 aa17.24■□□□□ 0.35
MSI2-207ENST00000579205 CCDC96Q2M329 555 aa17.24■□□□□ 0.35
MSI2-207ENST00000579205 SCYL3Q8IZE3 742 aa17.24■□□□□ 0.35
MSI2-207ENST00000579205 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.24■□□□□ 0.35
MSI2-207ENST00000579205 NMRK2Q9NPI5 230 aa17.24■□□□□ 0.35
MSI2-207ENST00000579205 RBM27Q9P2N5 1060 aaKnown RBP17.24■□□□□ 0.35
MSI2-207ENST00000579205 ATAD5Q96QE3 1844 aa17.24■□□□□ 0.35
MSI2-207ENST00000579205 PTPDC1A2A3K4 754 aa17.23■□□□□ 0.35
MSI2-207ENST00000579205 USP17L5A8MUK1 530 aa17.23■□□□□ 0.35
MSI2-207ENST00000579205 PHF20L1A8MW92 1017 aa17.23■□□□□ 0.35
MSI2-207ENST00000579205 GJB2P29033 226 aa17.23■□□□□ 0.35
MSI2-207ENST00000579205 NOVP48745 357 aa17.23■□□□□ 0.35
MSI2-207ENST00000579205 SSRP1Q08945 709 aaKnown RBP17.23■□□□□ 0.35
MSI2-207ENST00000579205 PRKG1Q13976 671 aa17.23■□□□□ 0.35
MSI2-207ENST00000579205 GRM4Q14833 912 aa17.23■□□□□ 0.35
MSI2-207ENST00000579205 ASPRV1Q53RT3 343 aa17.23■□□□□ 0.35
MSI2-207ENST00000579205 GPBP1L1Q9HC44 474 aaPredicted RBP17.23■□□□□ 0.35
MSI2-207ENST00000579205 ZNF112Q9UJU3 913 aa17.23■□□□□ 0.35
MSI2-207ENST00000579205 DOCK1Q14185 1865 aa17.22■□□□□ 0.35
MSI2-207ENST00000579205 MAP3K9P80192 1104 aa17.22■□□□□ 0.35
MSI2-207ENST00000579205 NUCB2P80303 420 aa17.22■□□□□ 0.35
MSI2-207ENST00000579205 GPATCH4Q5T3I0 446 aaKnown RBP17.22■□□□□ 0.35
MSI2-207ENST00000579205 MAP1SQ66K74 1059 aaPredicted RBP17.22■□□□□ 0.35
MSI2-207ENST00000579205 CLEC10AQ8IUN9 316 aa17.22■□□□□ 0.35
MSI2-207ENST00000579205 DCAF4Q8WV16 495 aa17.22■□□□□ 0.35
MSI2-207ENST00000579205 MKL1Q969V6 931 aa17.22■□□□□ 0.35
MSI2-207ENST00000579205 KLRG1Q96E93 195 aa17.22■□□□□ 0.35
MSI2-207ENST00000579205 DDX11Q96FC9 970 aa17.22■□□□□ 0.35
MSI2-207ENST00000579205 CHMP5Q9NZZ3 219 aa17.22■□□□□ 0.35
MSI2-207ENST00000579205 H3BQV1 296 aa17.21■□□□□ 0.35
MSI2-207ENST00000579205 IFNAR1P17181 557 aa17.21■□□□□ 0.35
MSI2-207ENST00000579205 INPP5BP32019 993 aa17.21■□□□□ 0.35
MSI2-207ENST00000579205 GUCY1A2P33402 732 aa17.21■□□□□ 0.35
MSI2-207ENST00000579205 ADD1P35611 737 aaKnown RBP17.21■□□□□ 0.35
MSI2-207ENST00000579205 SLC1A4P43007 532 aa17.21■□□□□ 0.35
MSI2-207ENST00000579205 USP14P54578 494 aa17.21■□□□□ 0.35
MSI2-207ENST00000579205 TRIM29Q14134 588 aa17.21■□□□□ 0.35
MSI2-207ENST00000579205 IFFO2Q5TF58 517 aa17.21■□□□□ 0.35
MSI2-207ENST00000579205 SLFN13Q68D06 897 aa17.21■□□□□ 0.35
MSI2-207ENST00000579205 NSUN7Q8NE18 718 aaKnown RBP17.21■□□□□ 0.35
MSI2-207ENST00000579205 GMCL1P1Q8NEA9 526 aa17.21■□□□□ 0.35
MSI2-207ENST00000579205 SLC26A6Q9BXS9 759 aa17.21■□□□□ 0.35
MSI2-207ENST00000579205 ZNF408Q9H9D4 720 aa17.21■□□□□ 0.35
MSI2-207ENST00000579205 ORC3Q9UBD5 711 aaPredicted RBP17.21■□□□□ 0.35
MSI2-207ENST00000579205 SSC5DA1L4H1 1573 aa17.2■□□□□ 0.34
MSI2-207ENST00000579205 XBP1P17861 261 aa17.2■□□□□ 0.34
MSI2-207ENST00000579205 IKQ13123 557 aaPredicted RBP17.2■□□□□ 0.34
MSI2-207ENST00000579205 RRP1BQ14684 758 aaKnown RBP17.2■□□□□ 0.34
MSI2-207ENST00000579205 NOL9Q5SY16 702 aaKnown RBP17.2■□□□□ 0.34
MSI2-207ENST00000579205 CHADLQ6NUI6 762 aa17.2■□□□□ 0.34
MSI2-207ENST00000579205 TMTC3Q6ZXV5 915 aa17.2■□□□□ 0.34
MSI2-207ENST00000579205 ANKRD13AQ8IZ07 590 aa17.2■□□□□ 0.34
MSI2-207ENST00000579205 STK36Q9NRP7 1315 aa17.2■□□□□ 0.34
MSI2-207ENST00000579205 KLRF2D3W0D1 207 aa17.19■□□□□ 0.34
MSI2-207ENST00000579205 JAK2O60674 1132 aa17.19■□□□□ 0.34
MSI2-207ENST00000579205 DEXIO95424 95 aa17.19■□□□□ 0.34
MSI2-207ENST00000579205 FMNL1O95466 1100 aaPredicted RBP17.19■□□□□ 0.34
MSI2-207ENST00000579205 PDHBP11177 359 aa17.19■□□□□ 0.34
MSI2-207ENST00000579205 CDC27P30260 824 aa17.19■□□□□ 0.34
MSI2-207ENST00000579205 FKBP1BP68106 108 aa17.19■□□□□ 0.34
MSI2-207ENST00000579205 ST3GAL1Q11201 340 aa17.19■□□□□ 0.34
MSI2-207ENST00000579205 SHROOM1Q2M3G4 852 aaPredicted RBP17.19■□□□□ 0.34
MSI2-207ENST00000579205 LARP1BQ659C4 914 aaKnown RBP17.19■□□□□ 0.34
MSI2-207ENST00000579205 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.19■□□□□ 0.34
MSI2-207ENST00000579205 SMARCC2Q8TAQ2 1214 aa17.19■□□□□ 0.34
MSI2-207ENST00000579205 ZKSCAN4Q969J2 545 aaPredicted RBP17.19■□□□□ 0.34
MSI2-207ENST00000579205 GMCL1Q96IK5 515 aa17.19■□□□□ 0.34
MSI2-207ENST00000579205 SEC63Q9UGP8 760 aaKnown RBP17.19■□□□□ 0.34
MSI2-207ENST00000579205 TMX2Q9Y320 296 aa17.19■□□□□ 0.34
MSI2-207ENST00000579205 WDR33Q9C0J8 1336 aaKnown RBP17.19■□□□□ 0.34
MSI2-207ENST00000579205 USP17L10C9JJH3 530 aa17.18■□□□□ 0.34
MSI2-207ENST00000579205 F5H6K3 240 aa17.18■□□□□ 0.34
MSI2-207ENST00000579205 USP2O75604 605 aaPredicted RBP17.18■□□□□ 0.34
MSI2-207ENST00000579205 KLRC3Q07444 240 aa17.18■□□□□ 0.34
MSI2-207ENST00000579205 CCDC82Q8N4S0 544 aa17.18■□□□□ 0.34
MSI2-207ENST00000579205 C2orf69Q8N8R5 385 aa17.18■□□□□ 0.34
MSI2-207ENST00000579205 RNF26Q9BY78 433 aaPredicted RBP17.18■□□□□ 0.34
MSI2-207ENST00000579205 VPS37CA5D8V6 355 aaPredicted RBP17.17■□□□□ 0.34
MSI2-207ENST00000579205 PALM3A6NDB9 673 aaPredicted RBP17.17■□□□□ 0.34
MSI2-207ENST00000579205 UNCXA6NJT0 531 aa17.17■□□□□ 0.34
MSI2-207ENST00000579205 PLEKHA8P1O95397 391 aa17.17■□□□□ 0.34
MSI2-207ENST00000579205 POTEIP0CG38 1075 aa17.17■□□□□ 0.34
MSI2-207ENST00000579205 POTEJP0CG39 1038 aa17.17■□□□□ 0.34
MSI2-207ENST00000579205 BMP3P12645 472 aa17.17■□□□□ 0.34
MSI2-207ENST00000579205 SMARCA1P28370 1054 aa17.17■□□□□ 0.34
MSI2-207ENST00000579205 ZNF543Q08ER8 600 aa17.17■□□□□ 0.34
MSI2-207ENST00000579205 USP17L2Q6R6M4 530 aa17.17■□□□□ 0.34
MSI2-207ENST00000579205 ZNF280CQ8ND82 737 aa17.17■□□□□ 0.34
MSI2-207ENST00000579205 LPAR1Q92633 364 aa17.17■□□□□ 0.34
MSI2-207ENST00000579205 PHKBQ93100 1093 aa17.17■□□□□ 0.34
MSI2-207ENST00000579205 RRP36Q96EU6 259 aaKnown RBP17.17■□□□□ 0.34
MSI2-207ENST00000579205 C8orf76Q96K31 380 aa17.17■□□□□ 0.34
MSI2-207ENST00000579205 WDR18Q9BV38 432 aa17.17■□□□□ 0.34
MSI2-207ENST00000579205 VCPKMTQ9H867 229 aa17.17■□□□□ 0.34
MSI2-207ENST00000579205 GPCPD1Q9NPB8 672 aa17.17■□□□□ 0.34
MSI2-207ENST00000579205 TMOD4Q9NZQ9 345 aa17.17■□□□□ 0.34
MSI2-207ENST00000579205 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.17■□□□□ 0.34
MSI2-207ENST00000579205 MAD2L2Q9UI95 211 aa17.17■□□□□ 0.34
MSI2-207ENST00000579205 ZHX2Q9Y6X8 837 aa17.17■□□□□ 0.34
MSI2-207ENST00000579205 FRMPD2Q68DX3 1309 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms