RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 CLIP2Q9UDT6 1046 aa13.22□□□□□ -0.29
CDK5RAP3-210ENST00000578733 PARP14Q460N5 1801 aa13.21□□□□□ -0.29
CDK5RAP3-210ENST00000578733 TRIM75PA6NK02 468 aa13.21□□□□□ -0.29
CDK5RAP3-210ENST00000578733 GUCY1A2P33402 732 aa13.21□□□□□ -0.29
CDK5RAP3-210ENST00000578733 LIFRP42702 1097 aa13.21□□□□□ -0.29
CDK5RAP3-210ENST00000578733 GTF2A2P52657 109 aa13.21□□□□□ -0.29
CDK5RAP3-210ENST00000578733 SNAPC2Q13487 334 aa13.21□□□□□ -0.29
CDK5RAP3-210ENST00000578733 USP17L2Q6R6M4 530 aa13.21□□□□□ -0.29
CDK5RAP3-210ENST00000578733 Q6ZUG5 572 aa13.21□□□□□ -0.29
CDK5RAP3-210ENST00000578733 CHST3Q7LGC8 479 aa13.21□□□□□ -0.29
CDK5RAP3-210ENST00000578733 CATIPQ7Z7H3 387 aa13.21□□□□□ -0.29
CDK5RAP3-210ENST00000578733 ENAHQ8N8S7 591 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-210ENST00000578733 MKL1Q969V6 931 aa13.21□□□□□ -0.29
CDK5RAP3-210ENST00000578733 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.21□□□□□ -0.29
CDK5RAP3-210ENST00000578733 IL17RBQ9NRM6 502 aa13.21□□□□□ -0.29
CDK5RAP3-210ENST00000578733 TMX2Q9Y320 296 aa13.21□□□□□ -0.29
CDK5RAP3-210ENST00000578733 AFG3L2Q9Y4W6 797 aa13.21□□□□□ -0.29
CDK5RAP3-210ENST00000578733 SH2B2O14492 632 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 RAD21O60216 631 aa13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 AOC2O75106 756 aa13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 SLC10A3P09131 477 aa13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 NEK4P51957 841 aa13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 BACE1P56817 501 aa13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 ANTXR2P58335 489 aa13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 EXOSC10Q01780 885 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 SPP2Q13103 211 aa13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 DGKZQ13574 1117 aa13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 SPRYD7Q5W111 196 aa13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 FASTKD5Q7L8L6 764 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 RASAL3Q86YV0 1011 aa13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 REM2Q8IYK8 340 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 ANKS1AQ92625 1134 aa13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 LPAR1Q92633 364 aa13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 KIF2CQ99661 725 aa13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 UPF3BQ9BZI7 483 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 KIAA1683Q9H0B3 1180 aa13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 TSKSQ9UJT2 592 aa13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 KCNH4Q9UQ05 1017 aa13.2□□□□□ -0.3
CDK5RAP3-210ENST00000578733 MANSC4A6NHS7 340 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 IRF6O14896 467 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 NMT2O60551 498 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 CALM1P0DP23 149 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 CALM2P0DP24 149 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 CALM3P0DP25 149 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 CETPP11597 493 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 NOVP48745 357 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 INHBEP58166 350 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 JAG1P78504 1218 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 SREBF2Q12772 1141 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 PABPC4Q13310 644 aaKnown RBP eCLIP13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 MTMR2Q13614 643 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 SEC23AQ15436 765 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 SHROOM1Q2M3G4 852 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 FBXL16Q8N461 479 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 PROCA1Q8NCQ7 364 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 PNMA1Q8ND90 353 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 GMCL1P1Q8NEA9 526 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 IGDCC4Q8TDY8 1250 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 TMEM47Q9BQJ4 181 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 ALDH8A1Q9H2A2 487 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 VCPKMTQ9H867 229 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 SLC12A7Q9Y666 1083 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 CASP8AP2Q9UKL3 1982 aa13.19□□□□□ -0.3
CDK5RAP3-210ENST00000578733 A0A0G2JLL6 359 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 DDAH1O94760 285 aa13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 MCM2P49736 904 aa13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 NOGQ13253 232 aa13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 ZYXQ15942 572 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 SH3D19Q5HYK7 790 aa13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 SLFN13Q68D06 897 aa13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 OTUD7BQ6GQQ9 843 aa13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 GADL1Q6ZQY3 521 aa13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 PRRT2Q7Z6L0 340 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 CCDC84Q86UT8 332 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 SGMS1Q86VZ5 419 aa13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 CLEC10AQ8IUN9 316 aa13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 LRRC47Q8N1G4 583 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 DCAF4Q8WV16 495 aa13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 CHMP4CQ96CF2 233 aa13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 LRRC2Q9BYS8 371 aa13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 LY9Q9HBG7 655 aa13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 ISY1Q9ULR0 285 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 NAP1L2Q9ULW6 460 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-210ENST00000578733 F5H6K3 240 aa13.17□□□□□ -0.3
CDK5RAP3-210ENST00000578733 WDR46O15213 610 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-210ENST00000578733 CPA1P15085 419 aa13.17□□□□□ -0.3
CDK5RAP3-210ENST00000578733 RCAN1P53805 252 aa13.17□□□□□ -0.3
CDK5RAP3-210ENST00000578733 HMGCS2P54868 508 aa13.17□□□□□ -0.3
CDK5RAP3-210ENST00000578733 KLRC3Q07444 240 aa13.17□□□□□ -0.3
CDK5RAP3-210ENST00000578733 MKRN3Q13064 507 aaKnown RBP13.17□□□□□ -0.3
CDK5RAP3-210ENST00000578733 RCSD1Q6JBY9 416 aa13.17□□□□□ -0.3
CDK5RAP3-210ENST00000578733 CTCFLQ8NI51 663 aaPredicted RBP13.17□□□□□ -0.3
CDK5RAP3-210ENST00000578733 ACER1Q8TDN7 264 aa13.17□□□□□ -0.3
CDK5RAP3-210ENST00000578733 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
CDK5RAP3-210ENST00000578733 BRF1Q92994 677 aa13.17□□□□□ -0.3
CDK5RAP3-210ENST00000578733 C12orf42Q96LP6 360 aa13.17□□□□□ -0.3
CDK5RAP3-210ENST00000578733 TCEANC2Q96MN5 208 aa13.17□□□□□ -0.3
CDK5RAP3-210ENST00000578733 AGXT2Q9BYV1 514 aa13.17□□□□□ -0.3
CDK5RAP3-210ENST00000578733 COL11A1P12107 1806 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms