RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 TOP6BLQ8N6T0 577 aa7.44□□□□□ -1.22
PTPRM-207ENST00000578571 EHMT1Q9H9B1 1298 aa7.44□□□□□ -1.22
PTPRM-207ENST00000578571 PCDHB14Q9Y5E9 798 aa7.44□□□□□ -1.22
PTPRM-207ENST00000578571 ARHGEF5Q12774 1597 aa7.44□□□□□ -1.22
PTPRM-207ENST00000578571 SAMD9LQ8IVG5 1584 aa7.44□□□□□ -1.22
PTPRM-207ENST00000578571 SYCP2Q9BX26 1530 aa7.43□□□□□ -1.22
PTPRM-207ENST00000578571 TGFB1P01137 390 aa7.43□□□□□ -1.22
PTPRM-207ENST00000578571 GJA8P48165 433 aa7.43□□□□□ -1.22
PTPRM-207ENST00000578571 TNNI2P48788 182 aa7.43□□□□□ -1.22
PTPRM-207ENST00000578571 CLCQ05315 142 aa7.43□□□□□ -1.22
PTPRM-207ENST00000578571 SLC6A19Q695T7 634 aa7.43□□□□□ -1.22
PTPRM-207ENST00000578571 RASGRP4Q8TDF6 673 aa7.43□□□□□ -1.22
PTPRM-207ENST00000578571 DPH2Q9BQC3 489 aaPredicted RBP7.43□□□□□ -1.22
PTPRM-207ENST00000578571 CCSER2Q9H7U1 834 aa7.43□□□□□ -1.22
PTPRM-207ENST00000578571 PRDM10Q9NQV6 1147 aa7.43□□□□□ -1.22
PTPRM-207ENST00000578571 ATG3Q9NT62 314 aa7.43□□□□□ -1.22
PTPRM-207ENST00000578571 SHANK2Q9UPX8 1470 aa7.43□□□□□ -1.22
PTPRM-207ENST00000578571 KDM6BO15054 1643 aa7.42□□□□□ -1.22
PTPRM-207ENST00000578571 DNMT1P26358 1616 aaKnown RBP7.42□□□□□ -1.22
PTPRM-207ENST00000578571 UPK3BL1B0FP48 263 aa7.42□□□□□ -1.22
PTPRM-207ENST00000578571 UPK3BL2E5RIL1 263 aa7.42□□□□□ -1.22
PTPRM-207ENST00000578571 SLITRK5O94991 958 aa7.42□□□□□ -1.22
PTPRM-207ENST00000578571 CYP27A1Q02318 531 aa7.42□□□□□ -1.22
PTPRM-207ENST00000578571 CPSF6Q16630 551 aaKnown RBP eCLIP7.42□□□□□ -1.22
PTPRM-207ENST00000578571 GK5Q6ZS86 529 aa7.42□□□□□ -1.22
PTPRM-207ENST00000578571 FAM214BQ7L5A3 538 aa7.42□□□□□ -1.22
PTPRM-207ENST00000578571 GIMAP7Q8NHV1 300 aa7.42□□□□□ -1.22
PTPRM-207ENST00000578571 GPRASP2Q96D09 838 aa7.42□□□□□ -1.22
PTPRM-207ENST00000578571 METTL22Q9BUU2 404 aaPredicted RBP7.42□□□□□ -1.22
PTPRM-207ENST00000578571 OSBPL1AQ9BXW6 950 aa7.42□□□□□ -1.22
PTPRM-207ENST00000578571 RNF112Q9ULX5 631 aa7.42□□□□□ -1.22
PTPRM-207ENST00000578571 POGZQ7Z3K3 1410 aa7.42□□□□□ -1.22
PTPRM-207ENST00000578571 PPRC1Q5VV67 1664 aaKnown RBP7.41□□□□□ -1.22
PTPRM-207ENST00000578571 CHURC1-FNTBB4DL54 471 aa7.41□□□□□ -1.22
PTPRM-207ENST00000578571 EOMESO95936 686 aa7.41□□□□□ -1.22
PTPRM-207ENST00000578571 MCM4P33991 863 aa7.41□□□□□ -1.22
PTPRM-207ENST00000578571 ZNF165P49910 485 aa7.41□□□□□ -1.22
PTPRM-207ENST00000578571 MFSD2AQ8NA29 543 aa7.41□□□□□ -1.22
PTPRM-207ENST00000578571 FAM13CQ8NE31 585 aa7.41□□□□□ -1.22
PTPRM-207ENST00000578571 PIM2Q9P1W9 311 aa7.41□□□□□ -1.22
PTPRM-207ENST00000578571 SPAG9O60271 1321 aaKnown RBP7.41□□□□□ -1.22
PTPRM-207ENST00000578571 ANKRD30AQ9BXX3 1397 aa7.41□□□□□ -1.22
PTPRM-207ENST00000578571 DAPK1P53355 1430 aa7.41□□□□□ -1.22
PTPRM-207ENST00000578571 MAGI2Q86UL8 1455 aa7.41□□□□□ -1.22
PTPRM-207ENST00000578571 HOXA10P31260 410 aaPredicted RBP7.4□□□□□ -1.22
PTPRM-207ENST00000578571 HNRNPMP52272 730 aaKnown RBP eCLIP7.4□□□□□ -1.22
PTPRM-207ENST00000578571 DUSP27Q5VZP5 1158 aa7.4□□□□□ -1.22
PTPRM-207ENST00000578571 SLFN12Q8IYM2 578 aa7.4□□□□□ -1.22
PTPRM-207ENST00000578571 RIN3Q8TB24 985 aa7.4□□□□□ -1.22
PTPRM-207ENST00000578571 XAGE3Q8WTP9 111 aa7.4□□□□□ -1.22
PTPRM-207ENST00000578571 MIPEPQ99797 713 aa7.4□□□□□ -1.22
PTPRM-207ENST00000578571 GINM1Q9NU53 330 aa7.4□□□□□ -1.22
PTPRM-207ENST00000578571 KLHL3Q9UH77 587 aa7.4□□□□□ -1.22
PTPRM-207ENST00000578571 INPP5FQ9Y2H2 1132 aa7.4□□□□□ -1.22
PTPRM-207ENST00000578571 U3KQE9 123 aa7.4□□□□□ -1.22
PTPRM-207ENST00000578571 RTEL1-TNFRSF6BF6WH68 1400 aa7.4□□□□□ -1.22
PTPRM-207ENST00000578571 HECW2Q9P2P5 1572 aa7.4□□□□□ -1.22
PTPRM-207ENST00000578571 CROCC2H7BZ55 1655 aa7.39□□□□□ -1.23
PTPRM-207ENST00000578571 MAST1Q9Y2H9 1570 aa7.39□□□□□ -1.23
PTPRM-207ENST00000578571 ZMYM4Q5VZL5 1548 aa7.39□□□□□ -1.23
PTPRM-207ENST00000578571 MBD5Q9P267 1494 aa7.39□□□□□ -1.23
PTPRM-207ENST00000578571 C9orf84Q5VXU9 1444 aa7.39□□□□□ -1.23
PTPRM-207ENST00000578571 ZNF644Q9H582 1327 aaPredicted RBP7.39□□□□□ -1.23
PTPRM-207ENST00000578571 SLC22A31A6NKX4 558 aa7.39□□□□□ -1.23
PTPRM-207ENST00000578571 SOX9P48436 509 aa7.39□□□□□ -1.23
PTPRM-207ENST00000578571 YARSP54577 528 aaKnown RBP7.39□□□□□ -1.23
PTPRM-207ENST00000578571 CYP27C1Q4G0S4 372 aa7.39□□□□□ -1.23
PTPRM-207ENST00000578571 LETMD1Q6P1Q0 360 aa7.39□□□□□ -1.23
PTPRM-207ENST00000578571 HEXIM2Q96MH2 286 aaKnown RBP7.39□□□□□ -1.23
PTPRM-207ENST00000578571 ANTXR1Q9H6X2 564 aa7.39□□□□□ -1.23
PTPRM-207ENST00000578571 GMIPQ9P107 970 aa7.39□□□□□ -1.23
PTPRM-207ENST00000578571 ZNRF3Q9ULT6 936 aa7.39□□□□□ -1.23
PTPRM-207ENST00000578571 EFR3BQ9Y2G0 817 aa7.39□□□□□ -1.23
PTPRM-207ENST00000578571 LEMD3Q9Y2U8 911 aa7.39□□□□□ -1.23
PTPRM-207ENST00000578571 ADGBQ8N7X0 1667 aa7.38□□□□□ -1.23
PTPRM-207ENST00000578571 KDM5CP41229 1560 aa7.38□□□□□ -1.23
PTPRM-207ENST00000578571 ATP7AQ04656 1500 aa7.38□□□□□ -1.23
PTPRM-207ENST00000578571 MLH3Q9UHC1 1453 aa7.38□□□□□ -1.23
PTPRM-207ENST00000578571 ROCK1Q13464 1354 aa7.38□□□□□ -1.23
PTPRM-207ENST00000578571 CNTNAP4Q9C0A0 1308 aa7.38□□□□□ -1.23
PTPRM-207ENST00000578571 RBAK-RBAKDNI3L0D1 243 aa7.38□□□□□ -1.23
PTPRM-207ENST00000578571 MED26O95402 600 aa7.38□□□□□ -1.23
PTPRM-207ENST00000578571 FOSL1P15407 271 aa7.38□□□□□ -1.23
PTPRM-207ENST00000578571 ZMYM1Q5SVZ6 1142 aa7.38□□□□□ -1.23
PTPRM-207ENST00000578571 OVOS1Q6IE37 1185 aa7.38□□□□□ -1.23
PTPRM-207ENST00000578571 PPP1R13LQ8WUF5 828 aa7.38□□□□□ -1.23
PTPRM-207ENST00000578571 SPATA32Q96LK8 384 aa7.38□□□□□ -1.23
PTPRM-207ENST00000578571 TINF2Q9BSI4 451 aa7.38□□□□□ -1.23
PTPRM-207ENST00000578571 PPT2Q9UMR5 302 aa7.38□□□□□ -1.23
PTPRM-207ENST00000578571 RICTORQ6R327 1708 aa7.38□□□□□ -1.23
PTPRM-207ENST00000578571 ZFYVE16Q7Z3T8 1539 aa7.37□□□□□ -1.23
PTPRM-207ENST00000578571 ABCC5O15440 1437 aa7.37□□□□□ -1.23
PTPRM-207ENST00000578571 TRAPPC8Q9Y2L5 1435 aa7.37□□□□□ -1.23
PTPRM-207ENST00000578571 MEIS3P2A8K0S8 358 aa7.37□□□□□ -1.23
PTPRM-207ENST00000578571 CYP26A1O43174 497 aa7.37□□□□□ -1.23
PTPRM-207ENST00000578571 RAPGEF3O95398 923 aa7.37□□□□□ -1.23
PTPRM-207ENST00000578571 COL9A2Q14055 689 aaPredicted RBP7.37□□□□□ -1.23
PTPRM-207ENST00000578571 MLECQ14165 292 aa7.37□□□□□ -1.23
PTPRM-207ENST00000578571 FAM181AQ8N9Y4 354 aa7.37□□□□□ -1.23
PTPRM-207ENST00000578571 DNAJB8Q8NHS0 232 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms