RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 TMX2Q9Y320 296 aa16.29■□□□□ 0.2
CUEDC1-204ENST00000577497 ROBO3Q96MS0 1386 aa16.28■□□□□ 0.2
CUEDC1-204ENST00000577497 MINDY4BA8MYZ0 360 aa16.28■□□□□ 0.2
CUEDC1-204ENST00000577497 ERC2O15083 957 aa16.28■□□□□ 0.2
CUEDC1-204ENST00000577497 FARP2O94887 1054 aaPredicted RBP16.28■□□□□ 0.2
CUEDC1-204ENST00000577497 SLC34A2O95436 690 aa16.28■□□□□ 0.2
CUEDC1-204ENST00000577497 ZFYP08048 801 aaPredicted RBP16.28■□□□□ 0.2
CUEDC1-204ENST00000577497 EEF2P13639 858 aaKnown RBP16.28■□□□□ 0.2
CUEDC1-204ENST00000577497 HDAC1Q13547 482 aaPredicted RBP16.28■□□□□ 0.2
CUEDC1-204ENST00000577497 SBK1Q52WX2 424 aa16.28■□□□□ 0.2
CUEDC1-204ENST00000577497 ANKRD45Q5TZF3 282 aa16.28■□□□□ 0.2
CUEDC1-204ENST00000577497 CCAR1Q8IX12 1150 aaKnown RBP16.28■□□□□ 0.2
CUEDC1-204ENST00000577497 CCDC17Q96LX7 622 aa16.28■□□□□ 0.2
CUEDC1-204ENST00000577497 FSD1Q9BTV5 496 aa16.28■□□□□ 0.2
CUEDC1-204ENST00000577497 CRISPLD2Q9H0B8 497 aa16.28■□□□□ 0.2
CUEDC1-204ENST00000577497 VCPKMTQ9H867 229 aa16.28■□□□□ 0.2
CUEDC1-204ENST00000577497 ARHGEF10LQ9HCE6 1279 aa16.28■□□□□ 0.2
CUEDC1-204ENST00000577497 PARP14Q460N5 1801 aa16.27■□□□□ 0.2
CUEDC1-204ENST00000577497 XRCC5P13010 732 aaKnown RBP16.27■□□□□ 0.2
CUEDC1-204ENST00000577497 PRKAR2AP13861 404 aaKnown RBP16.27■□□□□ 0.2
CUEDC1-204ENST00000577497 RASA1P20936 1047 aa16.27■□□□□ 0.2
CUEDC1-204ENST00000577497 ATP2B2Q01814 1243 aa16.27■□□□□ 0.2
CUEDC1-204ENST00000577497 COG2Q14746 738 aa16.27■□□□□ 0.2
CUEDC1-204ENST00000577497 MAP3K21Q5TCX8 1036 aa16.27■□□□□ 0.2
CUEDC1-204ENST00000577497 WDR78Q5VTH9 848 aa16.27■□□□□ 0.2
CUEDC1-204ENST00000577497 DIS3LQ8TF46 1054 aaKnown RBP16.27■□□□□ 0.2
CUEDC1-204ENST00000577497 RPTORQ8N122 1335 aa16.26■□□□□ 0.19
CUEDC1-204ENST00000577497 H0YGN5 161 aa16.26■□□□□ 0.19
CUEDC1-204ENST00000577497 TFRCP02786 760 aaKnown RBP16.26■□□□□ 0.19
CUEDC1-204ENST00000577497 RGS2P41220 211 aa16.26■□□□□ 0.19
CUEDC1-204ENST00000577497 TDO2P48775 406 aa16.26■□□□□ 0.19
CUEDC1-204ENST00000577497 CCNA1P78396 465 aa16.26■□□□□ 0.19
CUEDC1-204ENST00000577497 ZMYM1Q5SVZ6 1142 aa16.26■□□□□ 0.19
CUEDC1-204ENST00000577497 GIMAP6Q6P9H5 292 aa16.26■□□□□ 0.19
CUEDC1-204ENST00000577497 LPAR1Q92633 364 aa16.26■□□□□ 0.19
CUEDC1-204ENST00000577497 ATG4CQ96DT6 458 aa16.26■□□□□ 0.19
CUEDC1-204ENST00000577497 APBA2Q99767 749 aa16.26■□□□□ 0.19
CUEDC1-204ENST00000577497 MOV10L1Q9BXT6 1211 aaKnown RBP16.26■□□□□ 0.19
CUEDC1-204ENST00000577497 HMX1Q9NP08 348 aaPredicted RBP16.26■□□□□ 0.19
CUEDC1-204ENST00000577497 FLRT1Q9NZU1 646 aa16.26■□□□□ 0.19
CUEDC1-204ENST00000577497 FOXP2O15409 715 aa16.25■□□□□ 0.19
CUEDC1-204ENST00000577497 PRDM1O75626 825 aa16.25■□□□□ 0.19
CUEDC1-204ENST00000577497 FLOT1O75955 427 aa16.25■□□□□ 0.19
CUEDC1-204ENST00000577497 APPP05067 770 aa16.25■□□□□ 0.19
CUEDC1-204ENST00000577497 ZKSCAN1P17029 563 aaPredicted RBP16.25■□□□□ 0.19
CUEDC1-204ENST00000577497 GNAT2P19087 354 aa16.25■□□□□ 0.19
CUEDC1-204ENST00000577497 PTPREP23469 700 aa16.25■□□□□ 0.19
CUEDC1-204ENST00000577497 DSG3P32926 999 aa16.25■□□□□ 0.19
CUEDC1-204ENST00000577497 CACNB2Q08289 660 aaPredicted RBP16.25■□□□□ 0.19
CUEDC1-204ENST00000577497 MAP2K5Q13163 448 aa16.25■□□□□ 0.19
CUEDC1-204ENST00000577497 SAMD1Q6SPF0 538 aaPredicted RBP16.25■□□□□ 0.19
CUEDC1-204ENST00000577497 CCDC129Q6ZRS4 1044 aa16.25■□□□□ 0.19
CUEDC1-204ENST00000577497 IFNL3Q8IZI9 196 aa16.25■□□□□ 0.19
CUEDC1-204ENST00000577497 GCC1Q96CN9 775 aa16.25■□□□□ 0.19
CUEDC1-204ENST00000577497 SH2D4AQ9H788 454 aa16.25■□□□□ 0.19
CUEDC1-204ENST00000577497 KANSL2Q9H9L4 492 aa16.25■□□□□ 0.19
CUEDC1-204ENST00000577497 CWC22Q9HCG8 908 aaKnown RBP16.25■□□□□ 0.19
CUEDC1-204ENST00000577497 FBXO28Q9NVF7 368 aa16.25■□□□□ 0.19
CUEDC1-204ENST00000577497 PATL2C9JE40 543 aaKnown RBP16.24■□□□□ 0.19
CUEDC1-204ENST00000577497 WDR46O15213 610 aaKnown RBP16.24■□□□□ 0.19
CUEDC1-204ENST00000577497 CCND3P30281 292 aaPredicted RBP16.24■□□□□ 0.19
CUEDC1-204ENST00000577497 MNX1P50219 401 aaPredicted RBP16.24■□□□□ 0.19
CUEDC1-204ENST00000577497 PDE1AP54750 535 aa16.24■□□□□ 0.19
CUEDC1-204ENST00000577497 GRB14Q14449 540 aa16.24■□□□□ 0.19
CUEDC1-204ENST00000577497 NPLOC4Q8TAT6 608 aa16.24■□□□□ 0.19
CUEDC1-204ENST00000577497 DPF3Q92784 378 aa16.24■□□□□ 0.19
CUEDC1-204ENST00000577497 SPATC1LQ9H0A9 340 aa16.24■□□□□ 0.19
CUEDC1-204ENST00000577497 HOXC10Q9NYD6 342 aa16.24■□□□□ 0.19
CUEDC1-204ENST00000577497 STAP2Q9UGK3 403 aa16.24■□□□□ 0.19
CUEDC1-204ENST00000577497 SLC15A5A6NIM6 579 aa16.23■□□□□ 0.19
CUEDC1-204ENST00000577497 EXOC6Q8TAG9 804 aa16.23■□□□□ 0.19
CUEDC1-204ENST00000577497 PAWRQ96IZ0 340 aaKnown RBP16.23■□□□□ 0.19
CUEDC1-204ENST00000577497 NUP88Q99567 741 aaPredicted RBP16.23■□□□□ 0.19
CUEDC1-204ENST00000577497 LNPKQ9C0E8 428 aa16.23■□□□□ 0.19
CUEDC1-204ENST00000577497 MKNK2Q9HBH9 465 aa16.23■□□□□ 0.19
CUEDC1-204ENST00000577497 COL11A1P12107 1806 aaPredicted RBP16.22■□□□□ 0.19
CUEDC1-204ENST00000577497 ZNF236Q9UL36 1845 aa16.22■□□□□ 0.19
CUEDC1-204ENST00000577497 IGKV6D-41A0A0C4DH26 115 aa16.22■□□□□ 0.19
CUEDC1-204ENST00000577497 RAD21O60216 631 aa16.22■□□□□ 0.19
CUEDC1-204ENST00000577497 IGHDP01880 384 aa16.22■□□□□ 0.19
CUEDC1-204ENST00000577497 ERCC3P19447 782 aa16.22■□□□□ 0.19
CUEDC1-204ENST00000577497 PLS1Q14651 629 aa16.22■□□□□ 0.19
CUEDC1-204ENST00000577497 LRRFIP1Q32MZ4 808 aaKnown RBP16.22■□□□□ 0.19
CUEDC1-204ENST00000577497 HABP4Q5JVS0 413 aaKnown RBP16.22■□□□□ 0.19
CUEDC1-204ENST00000577497 FAM83BQ5T0W9 1011 aa16.22■□□□□ 0.19
CUEDC1-204ENST00000577497 ZBTB47Q9UFB7 747 aaPredicted RBP16.22■□□□□ 0.19
CUEDC1-204ENST00000577497 IVNS1ABPQ9Y6Y0 642 aa16.22■□□□□ 0.19
CUEDC1-204ENST00000577497 ALPK3Q96L96 1907 aa16.21■□□□□ 0.19
CUEDC1-204ENST00000577497 RANBP2P49792 3224 aaKnown RBP16.21■□□□□ 0.19
CUEDC1-204ENST00000577497 HOXC6P09630 235 aa16.21■□□□□ 0.19
CUEDC1-204ENST00000577497 ADORA2AP29274 412 aa16.21■□□□□ 0.19
CUEDC1-204ENST00000577497 TMEM132BQ14DG7 1078 aa16.21■□□□□ 0.19
CUEDC1-204ENST00000577497 VPS53Q5VIR6 699 aa16.21■□□□□ 0.19
CUEDC1-204ENST00000577497 B4GALNT3Q6L9W6 998 aa16.21■□□□□ 0.19
CUEDC1-204ENST00000577497 SMC5Q8IY18 1101 aa16.21■□□□□ 0.19
CUEDC1-204ENST00000577497 TRMT44Q8IYL2 757 aaKnown RBP16.21■□□□□ 0.19
CUEDC1-204ENST00000577497 HTATIP2Q9BUP3 242 aa16.21■□□□□ 0.19
CUEDC1-204ENST00000577497 GOPCQ9HD26 462 aa16.21■□□□□ 0.19
CUEDC1-204ENST00000577497 OGDHLQ9ULD0 1010 aa16.21■□□□□ 0.19
CUEDC1-204ENST00000577497 ADAMTS5Q9UNA0 930 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms