RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 ZKSCAN4Q969J2 545 aaPredicted RBP19.23■□□□□ 0.67
ERCC4-208ENST00000576348 AS3MTQ9HBK9 375 aa19.23■□□□□ 0.67
ERCC4-208ENST00000576348 HPS5Q9UPZ3 1129 aa19.23■□□□□ 0.67
ERCC4-208ENST00000576348 SMC3Q9UQE7 1217 aa19.23■□□□□ 0.67
ERCC4-208ENST00000576348 NOVP48745 357 aa19.22■□□□□ 0.67
ERCC4-208ENST00000576348 CCDC96Q2M329 555 aa19.22■□□□□ 0.67
ERCC4-208ENST00000576348 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.22■□□□□ 0.67
ERCC4-208ENST00000576348 INTS4Q96HW7 963 aaKnown RBP19.22■□□□□ 0.67
ERCC4-208ENST00000576348 GOPCQ9HD26 462 aa19.22■□□□□ 0.67
ERCC4-208ENST00000576348 PARP1P09874 1014 aaKnown RBP19.21■□□□□ 0.67
ERCC4-208ENST00000576348 GNAQP50148 359 aa19.21■□□□□ 0.67
ERCC4-208ENST00000576348 NOL9Q5SY16 702 aaKnown RBP19.21■□□□□ 0.67
ERCC4-208ENST00000576348 ANKRD13AQ8IZ07 590 aa19.21■□□□□ 0.67
ERCC4-208ENST00000576348 MKL1Q969V6 931 aa19.21■□□□□ 0.67
ERCC4-208ENST00000576348 LLPHQ9BRT6 129 aaKnown RBP19.21■□□□□ 0.67
ERCC4-208ENST00000576348 SYNPO2Q9UMS6 1093 aa19.21■□□□□ 0.67
ERCC4-208ENST00000576348 CELF2O95319 508 aaKnown RBP19.2■□□□□ 0.66
ERCC4-208ENST00000576348 YY1P25490 414 aa19.2■□□□□ 0.66
ERCC4-208ENST00000576348 TROAPQ12815 778 aa19.2■□□□□ 0.66
ERCC4-208ENST00000576348 GRM4Q14833 912 aa19.2■□□□□ 0.66
ERCC4-208ENST00000576348 SLFN13Q68D06 897 aa19.2■□□□□ 0.66
ERCC4-208ENST00000576348 C2orf69Q8N8R5 385 aa19.2■□□□□ 0.66
ERCC4-208ENST00000576348 MAP3K14Q99558 947 aa19.2■□□□□ 0.66
ERCC4-208ENST00000576348 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.2■□□□□ 0.66
ERCC4-208ENST00000576348 KIF3AQ9Y496 699 aa19.2■□□□□ 0.66
ERCC4-208ENST00000576348 PTPRAP18433 802 aa19.19■□□□□ 0.66
ERCC4-208ENST00000576348 ADD1P35611 737 aaKnown RBP19.19■□□□□ 0.66
ERCC4-208ENST00000576348 FKBP1BP68106 108 aa19.19■□□□□ 0.66
ERCC4-208ENST00000576348 AKAP17AQ02040 695 aaKnown RBP19.19■□□□□ 0.66
ERCC4-208ENST00000576348 VGLL4Q14135 290 aa19.19■□□□□ 0.66
ERCC4-208ENST00000576348 ASPRV1Q53RT3 343 aa19.19■□□□□ 0.66
ERCC4-208ENST00000576348 CCDC84Q86UT8 332 aaPredicted RBP19.19■□□□□ 0.66
ERCC4-208ENST00000576348 TRIM22Q8IYM9 498 aa19.19■□□□□ 0.66
ERCC4-208ENST00000576348 FAM184AQ8NB25 1140 aa19.19■□□□□ 0.66
ERCC4-208ENST00000576348 ACER1Q8TDN7 264 aa19.19■□□□□ 0.66
ERCC4-208ENST00000576348 DCAF4Q8WV16 495 aa19.19■□□□□ 0.66
ERCC4-208ENST00000576348 F5H6K3 240 aa19.18■□□□□ 0.66
ERCC4-208ENST00000576348 CDC27P30260 824 aa19.18■□□□□ 0.66
ERCC4-208ENST00000576348 ECE1P42892 770 aa19.18■□□□□ 0.66
ERCC4-208ENST00000576348 SLC1A4P43007 532 aa19.18■□□□□ 0.66
ERCC4-208ENST00000576348 HMGN5P82970 282 aaKnown RBP19.18■□□□□ 0.66
ERCC4-208ENST00000576348 KLRC3Q07444 240 aa19.18■□□□□ 0.66
ERCC4-208ENST00000576348 ZYXQ15942 572 aaKnown RBP19.18■□□□□ 0.66
ERCC4-208ENST00000576348 MOB2Q70IA6 237 aa19.18■□□□□ 0.66
ERCC4-208ENST00000576348 SMC1BQ8NDV3 1235 aa19.18■□□□□ 0.66
ERCC4-208ENST00000576348 GMCL1P1Q8NEA9 526 aa19.18■□□□□ 0.66
ERCC4-208ENST00000576348 LZTS2Q9BRK4 669 aa19.18■□□□□ 0.66
ERCC4-208ENST00000576348 ELP3Q9H9T3 547 aa19.18■□□□□ 0.66
ERCC4-208ENST00000576348 GBA2Q9HCG7 927 aaPredicted RBP19.18■□□□□ 0.66
ERCC4-208ENST00000576348 CWC22Q9HCG8 908 aaKnown RBP19.18■□□□□ 0.66
ERCC4-208ENST00000576348 TMX2Q9Y320 296 aa19.18■□□□□ 0.66
ERCC4-208ENST00000576348 ZHX2Q9Y6X8 837 aa19.18■□□□□ 0.66
ERCC4-208ENST00000576348 NID2Q14112 1375 aa19.18■□□□□ 0.66
ERCC4-208ENST00000576348 PTPDC1A2A3K4 754 aa19.17■□□□□ 0.66
ERCC4-208ENST00000576348 UBE2Q2LH0YL09 131 aa19.17■□□□□ 0.66
ERCC4-208ENST00000576348 PDHBP11177 359 aa19.17■□□□□ 0.66
ERCC4-208ENST00000576348 USP14P54578 494 aa19.17■□□□□ 0.66
ERCC4-208ENST00000576348 FMR1Q06787 632 aaKnown RBP eCLIP19.17■□□□□ 0.66
ERCC4-208ENST00000576348 SSRP1Q08945 709 aaKnown RBP19.17■□□□□ 0.66
ERCC4-208ENST00000576348 ST3GAL1Q11201 340 aa19.17■□□□□ 0.66
ERCC4-208ENST00000576348 IKQ13123 557 aaPredicted RBP19.17■□□□□ 0.66
ERCC4-208ENST00000576348 MAP3K11Q16584 847 aa19.17■□□□□ 0.66
ERCC4-208ENST00000576348 USP17L2Q6R6M4 530 aa19.17■□□□□ 0.66
ERCC4-208ENST00000576348 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.17■□□□□ 0.66
ERCC4-208ENST00000576348 TMTC3Q6ZXV5 915 aa19.17■□□□□ 0.66
ERCC4-208ENST00000576348 SIAH1Q8IUQ4 282 aa19.17■□□□□ 0.66
ERCC4-208ENST00000576348 ZNF280CQ8ND82 737 aa19.17■□□□□ 0.66
ERCC4-208ENST00000576348 NSUN7Q8NE18 718 aaKnown RBP19.17■□□□□ 0.66
ERCC4-208ENST00000576348 DDX11Q96FC9 970 aa19.17■□□□□ 0.66
ERCC4-208ENST00000576348 WDR18Q9BV38 432 aa19.17■□□□□ 0.66
ERCC4-208ENST00000576348 GPCPD1Q9NPB8 672 aa19.17■□□□□ 0.66
ERCC4-208ENST00000576348 FRMPD2Q68DX3 1309 aaPredicted RBP19.17■□□□□ 0.66
ERCC4-208ENST00000576348 A0A1W2PRG0 241 aa19.16■□□□□ 0.66
ERCC4-208ENST00000576348 TRIM75PA6NK02 468 aa19.16■□□□□ 0.66
ERCC4-208ENST00000576348 USP17L10C9JJH3 530 aa19.16■□□□□ 0.66
ERCC4-208ENST00000576348 JAK2O60674 1132 aa19.16■□□□□ 0.66
ERCC4-208ENST00000576348 NDUFB10O96000 172 aa19.16■□□□□ 0.66
ERCC4-208ENST00000576348 GOLGA8HP0CJ92 632 aa19.16■□□□□ 0.66
ERCC4-208ENST00000576348 GJB2P29033 226 aa19.16■□□□□ 0.66
ERCC4-208ENST00000576348 SPP2Q13103 211 aa19.16■□□□□ 0.66
ERCC4-208ENST00000576348 GPATCH4Q5T3I0 446 aaKnown RBP19.16■□□□□ 0.66
ERCC4-208ENST00000576348 SPICE1Q8N0Z3 855 aa19.16■□□□□ 0.66
ERCC4-208ENST00000576348 CCDC82Q8N4S0 544 aa19.16■□□□□ 0.66
ERCC4-208ENST00000576348 SLC10A4Q96EP9 437 aa19.16■□□□□ 0.66
ERCC4-208ENST00000576348 SLC26A6Q9BXS9 759 aa19.16■□□□□ 0.66
ERCC4-208ENST00000576348 VCPKMTQ9H867 229 aa19.16■□□□□ 0.66
ERCC4-208ENST00000576348 SNCAIPQ9Y6H5 919 aa19.16■□□□□ 0.66
ERCC4-208ENST00000576348 UNCXA6NJT0 531 aa19.15■□□□□ 0.66
ERCC4-208ENST00000576348 KLRF2D3W0D1 207 aa19.15■□□□□ 0.66
ERCC4-208ENST00000576348 KIF3CO14782 793 aa19.15■□□□□ 0.66
ERCC4-208ENST00000576348 PPFIA3O75145 1194 aa19.15■□□□□ 0.66
ERCC4-208ENST00000576348 PLEKHA8P1O95397 391 aa19.15■□□□□ 0.66
ERCC4-208ENST00000576348 BMP3P12645 472 aa19.15■□□□□ 0.66
ERCC4-208ENST00000576348 IFNAR1P17181 557 aa19.15■□□□□ 0.66
ERCC4-208ENST00000576348 ZNF543Q08ER8 600 aa19.15■□□□□ 0.66
ERCC4-208ENST00000576348 MTMR2Q13614 643 aa19.15■□□□□ 0.66
ERCC4-208ENST00000576348 ERO1BQ86YB8 467 aa19.15■□□□□ 0.66
ERCC4-208ENST00000576348 GMCL1Q96IK5 515 aa19.15■□□□□ 0.66
ERCC4-208ENST00000576348 KIAA1683Q9H0B3 1180 aa19.15■□□□□ 0.66
ERCC4-208ENST00000576348 FAM217BQ9NTX9 383 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms