RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 NDUFB10O96000 172 aa9.35□□□□□ -0.91
CCDC40-215ENST00000576033 IMMTQ16891 758 aaKnown RBP9.35□□□□□ -0.91
CCDC40-215ENST00000576033 ADCK5Q3MIX3 580 aa9.35□□□□□ -0.91
CCDC40-215ENST00000576033 FAM83BQ5T0W9 1011 aa9.35□□□□□ -0.91
CCDC40-215ENST00000576033 COL13A1Q5TAT6 717 aaPredicted RBP9.35□□□□□ -0.91
CCDC40-215ENST00000576033 RCSD1Q6JBY9 416 aa9.35□□□□□ -0.91
CCDC40-215ENST00000576033 USP17L2Q6R6M4 530 aa9.35□□□□□ -0.91
CCDC40-215ENST00000576033 MFSD6Q6ZSS7 791 aa9.35□□□□□ -0.91
CCDC40-215ENST00000576033 NEDD1Q8NHV4 660 aa9.35□□□□□ -0.91
CCDC40-215ENST00000576033 CD99L2Q8TCZ2 262 aa9.35□□□□□ -0.91
CCDC40-215ENST00000576033 TCEANC2Q96MN5 208 aa9.35□□□□□ -0.91
CCDC40-215ENST00000576033 LRRC2Q9BYS8 371 aa9.35□□□□□ -0.91
CCDC40-215ENST00000576033 VCPKMTQ9H867 229 aa9.35□□□□□ -0.91
CCDC40-215ENST00000576033 TXNRD2Q9NNW7 524 aa9.35□□□□□ -0.91
CCDC40-215ENST00000576033 SAGE1Q9NXZ1 904 aa9.35□□□□□ -0.91
CCDC40-215ENST00000576033 TMOD4Q9NZQ9 345 aa9.35□□□□□ -0.91
CCDC40-215ENST00000576033 STX8Q9UNK0 236 aa9.35□□□□□ -0.91
CCDC40-215ENST00000576033 TMX2Q9Y320 296 aa9.35□□□□□ -0.91
CCDC40-215ENST00000576033 U3KPZ7 1027 aaPredicted RBP9.35□□□□□ -0.91
CCDC40-215ENST00000576033 FRMPD2Q68DX3 1309 aaPredicted RBP9.34□□□□□ -0.91
CCDC40-215ENST00000576033 GPR25O00155 361 aa9.34□□□□□ -0.91
CCDC40-215ENST00000576033 CNMDO75829 334 aa9.34□□□□□ -0.91
CCDC40-215ENST00000576033 SLC3A2P08195 630 aaKnown RBP9.34□□□□□ -0.91
CCDC40-215ENST00000576033 CTCFP49711 727 aaPredicted RBP9.34□□□□□ -0.91
CCDC40-215ENST00000576033 SNAP25P60880 206 aa9.34□□□□□ -0.91
CCDC40-215ENST00000576033 NECTIN1Q15223 517 aa9.34□□□□□ -0.91
CCDC40-215ENST00000576033 RAB11FIP4Q86YS3 637 aa9.34□□□□□ -0.91
CCDC40-215ENST00000576033 PROCA1Q8NCQ7 364 aaPredicted RBP9.34□□□□□ -0.91
CCDC40-215ENST00000576033 C12orf42Q96LP6 360 aa9.34□□□□□ -0.91
CCDC40-215ENST00000576033 CCDC17Q96LX7 622 aa9.34□□□□□ -0.91
CCDC40-215ENST00000576033 P2RX7Q99572 595 aaKnown RBP9.34□□□□□ -0.91
CCDC40-215ENST00000576033 PAGR1Q9BTK6 254 aa9.34□□□□□ -0.91
CCDC40-215ENST00000576033 BEGAINQ9BUH8 593 aa9.34□□□□□ -0.91
CCDC40-215ENST00000576033 TANGO6Q9C0B7 1094 aa9.34□□□□□ -0.91
CCDC40-215ENST00000576033 CPVLQ9H3G5 476 aa9.34□□□□□ -0.91
CCDC40-215ENST00000576033 ARHGEF10LQ9HCE6 1279 aa9.34□□□□□ -0.91
CCDC40-215ENST00000576033 ZSWIM5Q9P217 1185 aa9.34□□□□□ -0.91
CCDC40-215ENST00000576033 SMCHD1A6NHR9 2005 aa9.34□□□□□ -0.91
CCDC40-215ENST00000576033 DOCK3Q8IZD9 2030 aa9.34□□□□□ -0.91
CCDC40-215ENST00000576033 TNKSO95271 1327 aa9.33□□□□□ -0.92
CCDC40-215ENST00000576033 LCTP09848 1927 aa9.33□□□□□ -0.92
CCDC40-215ENST00000576033 SPDYE16A6NNV3 312 aaPredicted RBP9.33□□□□□ -0.92
CCDC40-215ENST00000576033 C17orf99Q6UX52 265 aa9.33□□□□□ -0.92
CCDC40-215ENST00000576033 KIAA1211Q6ZU35 1233 aa9.33□□□□□ -0.92
CCDC40-215ENST00000576033 KCTD1Q719H9 257 aa9.33□□□□□ -0.92
CCDC40-215ENST00000576033 FASTKD5Q7L8L6 764 aaKnown RBP9.33□□□□□ -0.92
CCDC40-215ENST00000576033 MB21D2Q8IYB1 491 aaPredicted RBP9.33□□□□□ -0.92
CCDC40-215ENST00000576033 ANKRD13CQ8N6S4 541 aa9.33□□□□□ -0.92
CCDC40-215ENST00000576033 ENAHQ8N8S7 591 aaPredicted RBP9.33□□□□□ -0.92
CCDC40-215ENST00000576033 ATG4CQ96DT6 458 aa9.33□□□□□ -0.92
CCDC40-215ENST00000576033 TMEM47Q9BQJ4 181 aa9.33□□□□□ -0.92
CCDC40-215ENST00000576033 KANSL2Q9H9L4 492 aa9.33□□□□□ -0.92
CCDC40-215ENST00000576033 GINM1Q9NU53 330 aa9.33□□□□□ -0.92
CCDC40-215ENST00000576033 BTBD7Q9P203 1132 aa9.33□□□□□ -0.92
CCDC40-215ENST00000576033 C19orf81C9J6K1 198 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 F5H6K3 240 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 TLR2O60603 784 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 TTLL1O95922 423 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 BCRP11274 1271 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 ANP32AP39687 249 aaKnown RBP9.32□□□□□ -0.92
CCDC40-215ENST00000576033 NOVP48745 357 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 INHBEP58166 350 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 HERVK_113P62684 666 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 IRX3P78415 501 aaPredicted RBP9.32□□□□□ -0.92
CCDC40-215ENST00000576033 KLRC3Q07444 240 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 TTBK2Q6IQ55 1244 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 CASC1Q6TDU7 716 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 CATSPERGQ6ZRH7 1159 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 SMCR8Q8TEV9 937 aaPredicted RBP9.32□□□□□ -0.92
CCDC40-215ENST00000576033 ESR2Q92731 530 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 IPO9Q96P70 1041 aaKnown RBP9.32□□□□□ -0.92
CCDC40-215ENST00000576033 PARK7Q99497 189 aaKnown RBP9.32□□□□□ -0.92
CCDC40-215ENST00000576033 MYL10Q9BUA6 226 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 CFHR5Q9BXR6 569 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 TBC1D2Q9BYX2 928 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 PORCNQ9H237 461 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 ZFYVE28Q9HCC9 887 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 NYAP2Q9P242 653 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 CTNNA3Q9UI47 895 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 ISY1Q9ULR0 285 aaKnown RBP9.32□□□□□ -0.92
CCDC40-215ENST00000576033 SNX14Q9Y5W7 946 aa9.32□□□□□ -0.92
CCDC40-215ENST00000576033 RBBP6Q7Z6E9 1792 aaKnown RBP9.32□□□□□ -0.92
CCDC40-215ENST00000576033 FLOT1O75955 427 aa9.31□□□□□ -0.92
CCDC40-215ENST00000576033 GOLGA8HP0CJ92 632 aa9.31□□□□□ -0.92
CCDC40-215ENST00000576033 RXRAP19793 462 aa9.31□□□□□ -0.92
CCDC40-215ENST00000576033 MCCP23508 829 aa9.31□□□□□ -0.92
CCDC40-215ENST00000576033 SLC16A2P36021 539 aa9.31□□□□□ -0.92
CCDC40-215ENST00000576033 CACNB1Q02641 598 aaPredicted RBP9.31□□□□□ -0.92
CCDC40-215ENST00000576033 SEC23AQ15436 765 aa9.31□□□□□ -0.92
CCDC40-215ENST00000576033 CCDC96Q2M329 555 aa9.31□□□□□ -0.92
CCDC40-215ENST00000576033 Q3C1V9 767 aa9.31□□□□□ -0.92
CCDC40-215ENST00000576033 SLFN13Q68D06 897 aa9.31□□□□□ -0.92
CCDC40-215ENST00000576033 TRIM47Q96LD4 638 aa9.31□□□□□ -0.92
CCDC40-215ENST00000576033 ZSCAN10Q96SZ4 725 aaPredicted RBP9.31□□□□□ -0.92
CCDC40-215ENST00000576033 RNF41Q9H4P4 317 aaPredicted RBP9.31□□□□□ -0.92
CCDC40-215ENST00000576033 ZNF287Q9HBT7 754 aa9.31□□□□□ -0.92
CCDC40-215ENST00000576033 GPCPD1Q9NPB8 672 aa9.31□□□□□ -0.92
CCDC40-215ENST00000576033 RBPJLQ9UBG7 517 aa9.31□□□□□ -0.92
CCDC40-215ENST00000576033 USP17L15C9J2P7 530 aa9.3□□□□□ -0.92
CCDC40-215ENST00000576033 USP17L13C9JLJ4 530 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms