RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, human

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC12A4-215	ENST00000575857	TSPY2	A6NKD2	308 aa		12.81	□□□□□ -0.36
SLC12A4-215	ENST00000575857	SLC27A2	O14975	620 aa		12.81	□□□□□ -0.36
SLC12A4-215	ENST00000575857	NMT2	O60551	498 aa		12.81	□□□□□ -0.36
SLC12A4-215	ENST00000575857	USP14	P54578	494 aa		12.81	□□□□□ -0.36
SLC12A4-215	ENST00000575857	CRHR2	Q13324	411 aa		12.81	□□□□□ -0.36
SLC12A4-215	ENST00000575857	RRP12	Q5JTH9	1297 aa	Known RBP	12.81	□□□□□ -0.36
SLC12A4-215	ENST00000575857	CREB3L3	Q68CJ9	461 aa		12.81	□□□□□ -0.36
SLC12A4-215	ENST00000575857	OTUD7B	Q6GQQ9	843 aa		12.81	□□□□□ -0.36
SLC12A4-215	ENST00000575857	GADL1	Q6ZQY3	521 aa		12.81	□□□□□ -0.36
SLC12A4-215	ENST00000575857	FEZ1	Q99689	392 aa		12.81	□□□□□ -0.36
SLC12A4-215	ENST00000575857	ARHGEF10L	Q9HCE6	1279 aa		12.81	□□□□□ -0.36
SLC12A4-215	ENST00000575857	TCP11L1	Q9NUJ3	509 aa		12.81	□□□□□ -0.36
SLC12A4-215	ENST00000575857	ADGRA2	Q96PE1	1338 aa		12.81	□□□□□ -0.36
SLC12A4-215	ENST00000575857		B4E1Z4	1266 aa		12.8	□□□□□ -0.36
SLC12A4-215	ENST00000575857		E7EWF7	191 aa		12.8	□□□□□ -0.36
SLC12A4-215	ENST00000575857	PDHX	O00330	501 aa		12.8	□□□□□ -0.36
SLC12A4-215	ENST00000575857	VCAM1	P19320	739 aa		12.8	□□□□□ -0.36
SLC12A4-215	ENST00000575857	HOXA7	P31268	230 aa	Predicted RBP	12.8	□□□□□ -0.36
SLC12A4-215	ENST00000575857	RCSD1	Q6JBY9	416 aa		12.8	□□□□□ -0.36
SLC12A4-215	ENST00000575857	ESR2	Q92731	530 aa		12.8	□□□□□ -0.36
SLC12A4-215	ENST00000575857	KCNB2	Q92953	911 aa		12.8	□□□□□ -0.36
SLC12A4-215	ENST00000575857	VCPKMT	Q9H867	229 aa		12.8	□□□□□ -0.36
SLC12A4-215	ENST00000575857	TOMM22	Q9NS69	142 aa		12.8	□□□□□ -0.36
SLC12A4-215	ENST00000575857	TMOD4	Q9NZQ9	345 aa		12.8	□□□□□ -0.36
SLC12A4-215	ENST00000575857	SYNPO2	Q9UMS6	1093 aa		12.8	□□□□□ -0.36
SLC12A4-215	ENST00000575857	BRCA2	P51587	3418 aa		12.8	□□□□□ -0.36
SLC12A4-215	ENST00000575857	EPB41L2	O43491	1005 aa	Known RBP	12.79	□□□□□ -0.36
SLC12A4-215	ENST00000575857	KDM4A	O75164	1064 aa		12.79	□□□□□ -0.36
SLC12A4-215	ENST00000575857	REC8	O95072	547 aa		12.79	□□□□□ -0.36
SLC12A4-215	ENST00000575857	TTLL1	O95922	423 aa		12.79	□□□□□ -0.36
SLC12A4-215	ENST00000575857	COL9A3	Q14050	684 aa	Predicted RBP	12.79	□□□□□ -0.36
SLC12A4-215	ENST00000575857	TAF1C	Q15572	869 aa	Predicted RBP	12.79	□□□□□ -0.36
SLC12A4-215	ENST00000575857	ZYX	Q15942	572 aa	Known RBP	12.79	□□□□□ -0.36
SLC12A4-215	ENST00000575857	TSGA10IP	Q3SY00	556 aa		12.79	□□□□□ -0.36
SLC12A4-215	ENST00000575857	CYB5R4	Q7L1T6	521 aa		12.79	□□□□□ -0.36
SLC12A4-215	ENST00000575857	RASEF	Q8IZ41	740 aa		12.79	□□□□□ -0.36
SLC12A4-215	ENST00000575857	KRT23	Q9C075	422 aa		12.79	□□□□□ -0.36
SLC12A4-215	ENST00000575857	SH2D4A	Q9H788	454 aa		12.79	□□□□□ -0.36
SLC12A4-215	ENST00000575857	CNNM2	Q9H8M5	875 aa		12.79	□□□□□ -0.36
SLC12A4-215	ENST00000575857	ZSWIM5	Q9P217	1185 aa		12.79	□□□□□ -0.36
SLC12A4-215	ENST00000575857	PCDH10	Q9P2E7	1040 aa		12.79	□□□□□ -0.36
SLC12A4-215	ENST00000575857	CLIP2	Q9UDT6	1046 aa		12.79	□□□□□ -0.36
SLC12A4-215	ENST00000575857	CYP2C8	P10632	490 aa		12.78	□□□□□ -0.36
SLC12A4-215	ENST00000575857	HSPA4	P34932	840 aa		12.78	□□□□□ -0.36
SLC12A4-215	ENST00000575857	ATP2B2	Q01814	1243 aa		12.78	□□□□□ -0.36
SLC12A4-215	ENST00000575857	POTEE	Q6S8J3	1075 aa		12.78	□□□□□ -0.36
SLC12A4-215	ENST00000575857	MB21D2	Q8IYB1	491 aa	Predicted RBP	12.78	□□□□□ -0.36
SLC12A4-215	ENST00000575857	GMCL1P1	Q8NEA9	526 aa		12.78	□□□□□ -0.36
SLC12A4-215	ENST00000575857	ANKS1A	Q92625	1134 aa		12.78	□□□□□ -0.36
SLC12A4-215	ENST00000575857	LPAR1	Q92633	364 aa		12.78	□□□□□ -0.36
SLC12A4-215	ENST00000575857	USP26	Q9BXU7	913 aa		12.78	□□□□□ -0.36
SLC12A4-215	ENST00000575857	ASCC2	Q9H1I8	757 aa	Predicted RBP	12.78	□□□□□ -0.36
SLC12A4-215	ENST00000575857	PTPN22	Q9Y2R2	807 aa		12.78	□□□□□ -0.36
SLC12A4-215	ENST00000575857		F5H6K3	240 aa		12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	TLR2	O60603	784 aa		12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	NDUFB10	O96000	172 aa		12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	EN2	P19622	333 aa	Predicted RBP	12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	ANTXR2	P58335	489 aa		12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	KLRC3	Q07444	240 aa		12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	PABPC4	Q13310	644 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	C8orf34	Q49A92	452 aa		12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	PPP4R3B	Q5MIZ7	849 aa		12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	C17orf99	Q6UX52	265 aa		12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	CATSPERG	Q6ZRH7	1159 aa		12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	LRRC47	Q8N1G4	583 aa	Known RBP	12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	NCOA7	Q8NI08	942 aa		12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	TTC14	Q96N46	770 aa		12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	PARK7	Q99497	189 aa	Known RBP	12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	TMEM47	Q9BQJ4	181 aa		12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	ZKSCAN3	Q9BRR0	538 aa		12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	RPAP3	Q9H6T3	665 aa	Predicted RBP	12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	ZFYVE28	Q9HCC9	887 aa		12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	STX8	Q9UNK0	236 aa		12.77	□□□□□ -0.37
SLC12A4-215	ENST00000575857	USP17L15	C9J2P7	530 aa		12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	USP17L13	C9JLJ4	530 aa		12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	USP17L11	C9JVI0	530 aa		12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	USP17L18	D6R9N7	530 aa		12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	USP17L22	D6RA61	530 aa		12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	USP17L17	D6RBQ6	530 aa		12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	USP17L19	D6RCP7	530 aa		12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	USP17L20	D6RJB6	530 aa		12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	WDR46	O15213	610 aa	Known RBP	12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	SEC24B	O95487	1268 aa		12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	BCR	P11274	1271 aa		12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	TOP1	P11387	765 aa	Known RBP	12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	USP17L24	Q0WX57	530 aa		12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	SEC23A	Q15436	765 aa		12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	RNF20	Q5VTR2	975 aa		12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	DGKH	Q86XP1	1220 aa		12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	SPICE1	Q8N0Z3	855 aa		12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	ENAH	Q8N8S7	591 aa	Predicted RBP	12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	P2RX7	Q99572	595 aa	Known RBP	12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	GOPC	Q9HD26	462 aa		12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	PNMA3	Q9UL41	463 aa		12.76	□□□□□ -0.37
SLC12A4-215	ENST00000575857	ECM2	O94769	699 aa	Predicted RBP	12.75	□□□□□ -0.37
SLC12A4-215	ENST00000575857	TNKS	O95271	1327 aa		12.75	□□□□□ -0.37
SLC12A4-215	ENST00000575857	MYC	P01106	439 aa	Predicted RBP	12.75	□□□□□ -0.37
SLC12A4-215	ENST00000575857	OSBP	P22059	807 aa		12.75	□□□□□ -0.37
SLC12A4-215	ENST00000575857	SP3	Q02447	781 aa		12.75	□□□□□ -0.37

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