RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 ARHGAP33O14559 1287 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 HMMRO75330 724 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 GIGYF1O75420 1035 aaPredicted RBP8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 ATP6V1G2O95670 118 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 CTAGE8P0CG41 777 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 CEBPAP49715 358 aaPredicted RBP8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 GNAQP50148 359 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 CCNG1P51959 295 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 PHEXP78562 749 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 PDE4DQ08499 809 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 SEPT2Q15019 361 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 PABPC1LQ4VXU2 614 aaKnown RBP8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 EMC10Q5UCC4 262 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 DMRTA1Q5VZB9 504 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 TMC6Q7Z403 805 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 CTAGE6Q86UF2 777 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 CTAGE4Q8IX94 777 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 ZNF687Q8N1G0 1237 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 ANKRD24Q8TF21 1146 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 TEKT4Q8WW24 435 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 DHX58Q96C10 678 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 TTC14Q96N46 770 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 NOD2Q9HC29 1040 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 PPP2R2CQ9Y2T4 447 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 PTPRMP28827 1452 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 GOLGA6L10A0A0M3HER8 536 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 CYP27B1O15528 508 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 TPPPO94811 219 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 SDSP20132 328 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 RHBDL3P58872 404 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 VSNL1P62760 191 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 ADCY1Q08828 1119 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 PTCH1Q13635 1447 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 CAMK4Q16566 473 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 GNPTABQ3T906 1256 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 C6orf89Q6UWU4 347 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 UBN2Q6ZU65 1347 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 CCAR1Q8IX12 1150 aaKnown RBP8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 DHX40Q8IX18 779 aaKnown RBP8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 SYCP3Q8IZU3 236 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 ZBTB8BQ8NAP8 495 aaPredicted RBP8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 CCDC148Q8NFR7 591 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 DYDC1Q8WWB3 177 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 NLRP7Q8WX94 980 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 KCNN1Q92952 543 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 RPGRIP1Q96KN7 1286 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 ZSCAN31Q96LW9 406 aaPredicted RBP8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 VCX3BQ9H321 246 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 VCX3AQ9NNX9 186 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 DMAP1Q9NPF5 467 aaPredicted RBP8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 SH2B1Q9NRF2 756 aaPredicted RBP8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 TFIP11Q9UBB9 837 aaKnown RBP8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 TUBGCP4Q9UGJ1 667 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 MTMR6Q9Y217 621 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 ADGRG1Q9Y653 693 aa8.91□□□□□ -0.98
TOM1L1-220ENST00000575333 SETD1BQ9UPS6 1966 aaKnown RBP8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 ZC3H4Q9UPT8 1303 aaKnown RBP8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 CFAP73A6NFT4 308 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 FANCGO15287 622 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 TROVE2P10155 538 aaKnown RBP eCLIP8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 BCRP11274 1271 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 SCNN1BP51168 640 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 MXRA7P84157 204 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 AKAP17AQ02040 695 aaKnown RBP8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 APBA1Q02410 837 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 SOGA3Q5TF21 947 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 NAA35Q5VZE5 725 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 MSL1Q68DK7 614 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 TTC6Q86TZ1 520 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 SLF2Q8IX21 1173 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 KIRREL3Q8IZU9 778 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 LRRC43Q8N309 656 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 WHAMMQ8TF30 809 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 CCDC12Q8WUD4 166 aaPredicted RBP8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 RSPH1Q8WYR4 309 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 CORO1BQ9BR76 489 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 ZBED2Q9BTP6 218 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 NUP58Q9BVL2 599 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 QPCTLQ9NXS2 382 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 SLC5A4Q9NY91 659 aa8.9□□□□□ -0.98
TOM1L1-220ENST00000575333 C3P01024 1663 aa8.9□□□□□ -0.99
TOM1L1-220ENST00000575333 UNC13BO14795 1591 aa8.9□□□□□ -0.99
TOM1L1-220ENST00000575333 ABCC3O15438 1527 aa8.9□□□□□ -0.99
TOM1L1-220ENST00000575333 LRRC10BA6NIK2 292 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 GOLGA8AA7E2F4 631 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 HMGB1P1B2RPK0 211 aaPredicted RBP8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 KIF4AO95239 1232 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 MBD4O95243 580 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 FAM107AO95990 144 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 GSTA1P08263 222 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 XBP1P17861 261 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 TRIM21P19474 475 aaKnown RBP8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 NEK2P51955 445 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 INHBCP55103 352 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 SPECC1Q5M775 1068 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 OLFML1Q6UWY5 402 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 BICDL1Q6ZP65 573 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 LMNTD2Q8IXW0 634 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 TCP11L2Q8N4U5 519 aa8.89□□□□□ -0.99
TOM1L1-220ENST00000575333 SSH1Q8WYL5 1049 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms