RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 TFAP4Q01664 338 aa24.57■■□□□ 1.52
HCFC1R1-208ENST00000575214 KIAA1755Q5JYT7 1200 aa24.57■■□□□ 1.52
HCFC1R1-208ENST00000575214 SKAP1Q86WV1 359 aa24.57■■□□□ 1.52
HCFC1R1-208ENST00000575214 PAGR1Q9BTK6 254 aa24.57■■□□□ 1.52
HCFC1R1-208ENST00000575214 GOPCQ9HD26 462 aa24.57■■□□□ 1.52
HCFC1R1-208ENST00000575214 INCENPQ9NQS7 918 aa24.57■■□□□ 1.52
HCFC1R1-208ENST00000575214 TOMM22Q9NS69 142 aa24.57■■□□□ 1.52
HCFC1R1-208ENST00000575214 NYAP2Q9P242 653 aa24.57■■□□□ 1.52
HCFC1R1-208ENST00000575214 PTCH2Q9Y6C5 1203 aa24.57■■□□□ 1.52
HCFC1R1-208ENST00000575214 PLIN4Q96Q06 1357 aa24.57■■□□□ 1.52
HCFC1R1-208ENST00000575214 IGKV6D-41A0A0C4DH26 115 aa24.56■■□□□ 1.52
HCFC1R1-208ENST00000575214 TSPY2A6NKD2 308 aa24.56■■□□□ 1.52
HCFC1R1-208ENST00000575214 CHMLP26374 656 aa24.56■■□□□ 1.52
HCFC1R1-208ENST00000575214 NEDD1Q8NHV4 660 aa24.56■■□□□ 1.52
HCFC1R1-208ENST00000575214 RUFY2Q8WXA3 655 aa24.56■■□□□ 1.52
HCFC1R1-208ENST00000575214 CEP95Q96GE4 821 aa24.56■■□□□ 1.52
HCFC1R1-208ENST00000575214 MORF4L1Q9UBU8 362 aa24.56■■□□□ 1.52
HCFC1R1-208ENST00000575214 SRRDQ9UH36 339 aa24.56■■□□□ 1.52
HCFC1R1-208ENST00000575214 RAD50Q92878 1312 aa24.56■■□□□ 1.52
HCFC1R1-208ENST00000575214 GREB1LQ9C091 1923 aaPredicted RBP24.55■■□□□ 1.52
HCFC1R1-208ENST00000575214 TNPO2O14787 897 aaKnown RBP24.55■■□□□ 1.52
HCFC1R1-208ENST00000575214 PRMT2P55345 433 aa24.55■■□□□ 1.52
HCFC1R1-208ENST00000575214 DSCC1Q9BVC3 393 aa24.55■■□□□ 1.52
HCFC1R1-208ENST00000575214 IL25Q9H293 177 aa24.55■■□□□ 1.52
HCFC1R1-208ENST00000575214 TXNRD2Q9NNW7 524 aa24.55■■□□□ 1.52
HCFC1R1-208ENST00000575214 MTMR4Q9NYA4 1195 aa24.55■■□□□ 1.52
HCFC1R1-208ENST00000575214 CLIP2Q9UDT6 1046 aa24.55■■□□□ 1.52
HCFC1R1-208ENST00000575214 MYPNQ86TC9 1320 aa24.55■■□□□ 1.52
HCFC1R1-208ENST00000575214 WDR46O15213 610 aaKnown RBP24.54■■□□□ 1.52
HCFC1R1-208ENST00000575214 RANBP6O60518 1105 aaKnown RBP24.54■■□□□ 1.52
HCFC1R1-208ENST00000575214 PEX10O60683 326 aa24.54■■□□□ 1.52
HCFC1R1-208ENST00000575214 RRP12Q5JTH9 1297 aaKnown RBP24.54■■□□□ 1.52
HCFC1R1-208ENST00000575214 GPRC5AQ8NFJ5 357 aa24.54■■□□□ 1.52
HCFC1R1-208ENST00000575214 RBPJLQ9UBG7 517 aa24.54■■□□□ 1.52
HCFC1R1-208ENST00000575214 TACC3Q9Y6A5 838 aa24.54■■□□□ 1.52
HCFC1R1-208ENST00000575214 SPDYE16A6NNV3 312 aaPredicted RBP24.54■■□□□ 1.52
HCFC1R1-208ENST00000575214 ORC4O43929 436 aa24.54■■□□□ 1.52
HCFC1R1-208ENST00000575214 TTLL1O95922 423 aa24.54■■□□□ 1.52
HCFC1R1-208ENST00000575214 ERVK-9P63128 1117 aa24.54■■□□□ 1.52
HCFC1R1-208ENST00000575214 ERVK-24P63145 666 aa24.54■■□□□ 1.52
HCFC1R1-208ENST00000575214 ZNF213O14771 459 aa24.53■■□□□ 1.52
HCFC1R1-208ENST00000575214 PRKCZQ05513 592 aa24.53■■□□□ 1.52
HCFC1R1-208ENST00000575214 COG2Q14746 738 aa24.53■■□□□ 1.52
HCFC1R1-208ENST00000575214 RAET1EQ8TD07 263 aa24.53■■□□□ 1.52
HCFC1R1-208ENST00000575214 COA7Q96BR5 231 aa24.53■■□□□ 1.52
HCFC1R1-208ENST00000575214 RABGAP1Q9Y3P9 1069 aa24.53■■□□□ 1.52
HCFC1R1-208ENST00000575214 FLOT1O75955 427 aa24.52■■□□□ 1.52
HCFC1R1-208ENST00000575214 FGRP09769 529 aa24.52■■□□□ 1.52
HCFC1R1-208ENST00000575214 SLC9C1Q4G0N8 1177 aa24.52■■□□□ 1.52
HCFC1R1-208ENST00000575214 AKNAD1Q5T1N1 836 aa24.52■■□□□ 1.52
HCFC1R1-208ENST00000575214 POTEEQ6S8J3 1075 aa24.52■■□□□ 1.52
HCFC1R1-208ENST00000575214 SAMD1Q6SPF0 538 aaPredicted RBP24.52■■□□□ 1.52
HCFC1R1-208ENST00000575214 LBX2Q6XYB7 198 aa24.52■■□□□ 1.52
HCFC1R1-208ENST00000575214 MFSD6Q6ZSS7 791 aa24.52■■□□□ 1.52
HCFC1R1-208ENST00000575214 TBC1D10CQ8IV04 446 aa24.52■■□□□ 1.52
HCFC1R1-208ENST00000575214 HOXC10Q9NYD6 342 aa24.52■■□□□ 1.52
HCFC1R1-208ENST00000575214 CTNNA3Q9UI47 895 aa24.52■■□□□ 1.52
HCFC1R1-208ENST00000575214 Q3C1V9 767 aa24.51■■□□□ 1.51
HCFC1R1-208ENST00000575214 PPP4R3BQ5MIZ7 849 aa24.51■■□□□ 1.51
HCFC1R1-208ENST00000575214 CCAR1Q8IX12 1150 aaKnown RBP24.51■■□□□ 1.51
HCFC1R1-208ENST00000575214 LRRC47Q8N1G4 583 aaKnown RBP24.51■■□□□ 1.51
HCFC1R1-208ENST00000575214 STAG1Q8WVM7 1258 aa24.51■■□□□ 1.51
HCFC1R1-208ENST00000575214 NBPF3Q9H094 633 aa24.51■■□□□ 1.51
HCFC1R1-208ENST00000575214 RNF41Q9H4P4 317 aaPredicted RBP24.51■■□□□ 1.51
HCFC1R1-208ENST00000575214 GABRQQ9UN88 632 aa24.51■■□□□ 1.51
HCFC1R1-208ENST00000575214 F5H6K3 240 aa24.5■■□□□ 1.51
HCFC1R1-208ENST00000575214 CNMDO75829 334 aa24.5■■□□□ 1.51
HCFC1R1-208ENST00000575214 NDUFB10O96000 172 aa24.5■■□□□ 1.51
HCFC1R1-208ENST00000575214 PCP11498 1178 aaKnown RBP24.5■■□□□ 1.51
HCFC1R1-208ENST00000575214 KLRC3Q07444 240 aa24.5■■□□□ 1.51
HCFC1R1-208ENST00000575214 IMMTQ16891 758 aaKnown RBP24.5■■□□□ 1.51
HCFC1R1-208ENST00000575214 FAM83BQ5T0W9 1011 aa24.5■■□□□ 1.51
HCFC1R1-208ENST00000575214 MKL1Q969V6 931 aa24.5■■□□□ 1.51
HCFC1R1-208ENST00000575214 STX8Q9UNK0 236 aa24.5■■□□□ 1.51
HCFC1R1-208ENST00000575214 NMT2O60551 498 aa24.49■■□□□ 1.51
HCFC1R1-208ENST00000575214 DSG3P32926 999 aa24.49■■□□□ 1.51
HCFC1R1-208ENST00000575214 FLT3LGP49771 235 aa24.49■■□□□ 1.51
HCFC1R1-208ENST00000575214 CCNA1P78396 465 aa24.49■■□□□ 1.51
HCFC1R1-208ENST00000575214 NBPF11Q86T75 865 aa24.49■■□□□ 1.51
HCFC1R1-208ENST00000575214 NUP88Q99567 741 aaPredicted RBP24.49■■□□□ 1.51
HCFC1R1-208ENST00000575214 BTBD7Q9P203 1132 aa24.49■■□□□ 1.51
HCFC1R1-208ENST00000575214 MGAMO43451 1857 aa24.48■■□□□ 1.51
HCFC1R1-208ENST00000575214 HTTP42858 3142 aa24.48■■□□□ 1.51
HCFC1R1-208ENST00000575214 SGSM2O43147 1006 aa24.48■■□□□ 1.51
HCFC1R1-208ENST00000575214 BMP2KLQ5H9B9 411 aa24.48■■□□□ 1.51
HCFC1R1-208ENST00000575214 SH3TC2Q8TF17 1288 aa24.48■■□□□ 1.51
HCFC1R1-208ENST00000575214 ARMC5Q96C12 935 aa24.48■■□□□ 1.51
HCFC1R1-208ENST00000575214 ATG4CQ96DT6 458 aa24.48■■□□□ 1.51
HCFC1R1-208ENST00000575214 PORCNQ9H237 461 aa24.48■■□□□ 1.51
HCFC1R1-208ENST00000575214 CWC22Q9HCG8 908 aaKnown RBP24.48■■□□□ 1.51
HCFC1R1-208ENST00000575214 IL17RBQ9NRM6 502 aa24.48■■□□□ 1.51
HCFC1R1-208ENST00000575214 SYNPO2Q9UMS6 1093 aa24.48■■□□□ 1.51
HCFC1R1-208ENST00000575214 MAPK4P31152 587 aa24.47■■□□□ 1.51
HCFC1R1-208ENST00000575214 SOX10P56693 466 aa24.47■■□□□ 1.51
HCFC1R1-208ENST00000575214 FBXO28Q9NVF7 368 aa24.47■■□□□ 1.51
HCFC1R1-208ENST00000575214 NEDD4P46934 1319 aa24.47■■□□□ 1.51
HCFC1R1-208ENST00000575214 MB21D1Q8N884 522 aa24.46■■□□□ 1.51
HCFC1R1-208ENST00000575214 GMCL1P1Q8NEA9 526 aa24.46■■□□□ 1.51
HCFC1R1-208ENST00000575214 GRK4P32298 578 aa24.45■■□□□ 1.5
HCFC1R1-208ENST00000575214 PTH1RQ03431 593 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms