RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 C16orf86Q6ZW13 317 aa12.01□□□□□ -0.49
USP43-205ENST00000574408 C2CD5Q86YS7 1000 aa12.01□□□□□ -0.49
USP43-205ENST00000574408 NAT10Q9H0A0 1025 aaKnown RBP12.01□□□□□ -0.49
USP43-205ENST00000574408 FAM237AA0A1B0GTK4 181 aa12□□□□□ -0.49
USP43-205ENST00000574408 NLRP5P59047 1200 aa12□□□□□ -0.49
USP43-205ENST00000574408 PFKFB3Q16875 520 aaPredicted RBP12□□□□□ -0.49
USP43-205ENST00000574408 NOM1Q5C9Z4 860 aaKnown RBP12□□□□□ -0.49
USP43-205ENST00000574408 TMEM47Q9BQJ4 181 aa12□□□□□ -0.49
USP43-205ENST00000574408 TCP11L1Q9NUJ3 509 aa12□□□□□ -0.49
USP43-205ENST00000574408 ZNF219Q9P2Y4 722 aaPredicted RBP12□□□□□ -0.49
USP43-205ENST00000574408 ZNF500O60304 480 aaPredicted RBP12□□□□□ -0.49
USP43-205ENST00000574408 SCNN1DP51172 638 aa12□□□□□ -0.49
USP43-205ENST00000574408 ZNF75DP51815 510 aa12□□□□□ -0.49
USP43-205ENST00000574408 GRM4Q14833 912 aa12□□□□□ -0.49
USP43-205ENST00000574408 NPY5RQ15761 445 aa12□□□□□ -0.49
USP43-205ENST00000574408 DRC7Q8IY82 874 aa12□□□□□ -0.49
USP43-205ENST00000574408 AOPEPQ8N6M6 819 aa12□□□□□ -0.49
USP43-205ENST00000574408 NRXN2Q9P2S2 1712 aa12□□□□□ -0.49
USP43-205ENST00000574408 SNED1Q8TER0 1413 aa11.99□□□□□ -0.49
USP43-205ENST00000574408 GOLGA6L6A8MZA4 724 aa11.99□□□□□ -0.49
USP43-205ENST00000574408 LONRF3Q496Y0 759 aa11.99□□□□□ -0.49
USP43-205ENST00000574408 ISM2Q6H9L7 571 aa11.99□□□□□ -0.49
USP43-205ENST00000574408 DHX40Q8IX18 779 aaKnown RBP11.99□□□□□ -0.49
USP43-205ENST00000574408 CNNM3Q8NE01 707 aa11.99□□□□□ -0.49
USP43-205ENST00000574408 GPKOWQ92917 476 aaPredicted RBP eCLIP11.99□□□□□ -0.49
USP43-205ENST00000574408 DBNDD1Q9H9R9 158 aa11.99□□□□□ -0.49
USP43-205ENST00000574408 SUGT1Q9Y2Z0 365 aa11.99□□□□□ -0.49
USP43-205ENST00000574408 CDK5RAP2Q96SN8 1893 aa11.99□□□□□ -0.49
USP43-205ENST00000574408 COL11A2P13942 1736 aaPredicted RBP11.99□□□□□ -0.49
USP43-205ENST00000574408 GNAQP50148 359 aa11.99□□□□□ -0.49
USP43-205ENST00000574408 KIAA2012Q0VF49 1180 aa11.99□□□□□ -0.49
USP43-205ENST00000574408 PNOCQ13519 176 aa11.99□□□□□ -0.49
USP43-205ENST00000574408 KRBA2Q6ZNG9 492 aa11.99□□□□□ -0.49
USP43-205ENST00000574408 C17orf53Q8N3J3 647 aaPredicted RBP11.99□□□□□ -0.49
USP43-205ENST00000574408 MAD2L2Q9UI95 211 aa11.99□□□□□ -0.49
USP43-205ENST00000574408 NLRP12P59046 1061 aa11.98□□□□□ -0.49
USP43-205ENST00000574408 CBX1P83916 185 aa11.98□□□□□ -0.49
USP43-205ENST00000574408 RASGRP2Q7LDG7 609 aa11.98□□□□□ -0.49
USP43-205ENST00000574408 PLA2G4DQ86XP0 818 aa11.98□□□□□ -0.49
USP43-205ENST00000574408 NEDD1Q8NHV4 660 aa11.98□□□□□ -0.49
USP43-205ENST00000574408 TNFRSF25Q93038 417 aa11.98□□□□□ -0.49
USP43-205ENST00000574408 SRPRBQ9Y5M8 271 aaKnown RBP11.98□□□□□ -0.49
USP43-205ENST00000574408 H0YIN7 160 aa11.98□□□□□ -0.49
USP43-205ENST00000574408 WNT7AO00755 349 aa11.98□□□□□ -0.49
USP43-205ENST00000574408 GOLGA8HP0CJ92 632 aa11.98□□□□□ -0.49
USP43-205ENST00000574408 ZNF174Q15697 407 aa11.98□□□□□ -0.49
USP43-205ENST00000574408 PIK3AP1Q6ZUJ8 805 aa11.98□□□□□ -0.49
USP43-205ENST00000574408 TTC38Q5R3I4 469 aa11.98□□□□□ -0.49
USP43-205ENST00000574408 METTL16Q86W50 562 aaKnown RBP11.98□□□□□ -0.49
USP43-205ENST00000574408 PDILTQ8N807 584 aa11.98□□□□□ -0.49
USP43-205ENST00000574408 CSRNP2Q9H175 543 aa11.98□□□□□ -0.49
USP43-205ENST00000574408 USP40Q9NVE5 1235 aa11.98□□□□□ -0.49
USP43-205ENST00000574408 POLR2DO15514 142 aaKnown RBP11.97□□□□□ -0.49
USP43-205ENST00000574408 CHRNA5P30532 468 aa11.97□□□□□ -0.49
USP43-205ENST00000574408 SLC35G1Q2M3R5 365 aa11.97□□□□□ -0.49
USP43-205ENST00000574408 CEP95Q96GE4 821 aa11.97□□□□□ -0.49
USP43-205ENST00000574408 DDX4Q9NQI0 724 aaKnown RBP11.97□□□□□ -0.49
USP43-205ENST00000574408 MYH1P12882 1939 aa11.97□□□□□ -0.49
USP43-205ENST00000574408 ADAMTS3O15072 1205 aa11.97□□□□□ -0.49
USP43-205ENST00000574408 USP49Q70CQ1 688 aa11.97□□□□□ -0.49
USP43-205ENST00000574408 ZNF579Q8NAF0 562 aaKnown RBP11.97□□□□□ -0.49
USP43-205ENST00000574408 CPVLQ9H3G5 476 aa11.97□□□□□ -0.49
USP43-205ENST00000574408 KCNQ5Q9NR82 932 aa11.97□□□□□ -0.49
USP43-205ENST00000574408 TUBE1Q9UJT0 475 aa11.97□□□□□ -0.49
USP43-205ENST00000574408 FOXN1O15353 648 aa11.96□□□□□ -0.49
USP43-205ENST00000574408 CALML3P27482 149 aa11.96□□□□□ -0.49
USP43-205ENST00000574408 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.96□□□□□ -0.49
USP43-205ENST00000574408 TEKT1Q969V4 418 aa11.96□□□□□ -0.49
USP43-205ENST00000574408 DDX60LQ5H9U9 1706 aaKnown RBP11.96□□□□□ -0.49
USP43-205ENST00000574408 PALM3A6NDB9 673 aaPredicted RBP11.96□□□□□ -0.49
USP43-205ENST00000574408 KLRF2D3W0D1 207 aa11.96□□□□□ -0.49
USP43-205ENST00000574408 CYTH3O43739 400 aa11.96□□□□□ -0.49
USP43-205ENST00000574408 BMP15O95972 392 aa11.96□□□□□ -0.49
USP43-205ENST00000574408 PTGS1P23219 599 aa11.96□□□□□ -0.49
USP43-205ENST00000574408 EN1Q05925 392 aaPredicted RBP11.96□□□□□ -0.49
USP43-205ENST00000574408 EZH2Q15910 746 aaKnown RBP11.96□□□□□ -0.49
USP43-205ENST00000574408 SARM1Q6SZW1 724 aa11.96□□□□□ -0.49
USP43-205ENST00000574408 HEATR3Q7Z4Q2 680 aa11.96□□□□□ -0.49
USP43-205ENST00000574408 CLIP2Q9UDT6 1046 aa11.96□□□□□ -0.49
USP43-205ENST00000574408 SERTAD1Q9UHV2 236 aa11.96□□□□□ -0.49
USP43-205ENST00000574408 SPDYE4A6NLX3 237 aa11.96□□□□□ -0.5
USP43-205ENST00000574408 TPM3P06753 285 aa11.96□□□□□ -0.5
USP43-205ENST00000574408 PARP1P09874 1014 aaKnown RBP11.96□□□□□ -0.5
USP43-205ENST00000574408 TOP1P11387 765 aaKnown RBP11.96□□□□□ -0.5
USP43-205ENST00000574408 SLC15A2Q16348 729 aa11.96□□□□□ -0.5
USP43-205ENST00000574408 TYW1BQ6NUM6 668 aa11.96□□□□□ -0.5
USP43-205ENST00000574408 CCDC186Q7Z3E2 898 aa11.96□□□□□ -0.5
USP43-205ENST00000574408 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.96□□□□□ -0.5
USP43-205ENST00000574408 BLIDQ8IZY5 108 aa11.96□□□□□ -0.5
USP43-205ENST00000574408 RASGRP4Q8TDF6 673 aa11.96□□□□□ -0.5
USP43-205ENST00000574408 KCNF1Q9H3M0 494 aa11.96□□□□□ -0.5
USP43-205ENST00000574408 NRBP1Q9UHY1 535 aa11.96□□□□□ -0.5
USP43-205ENST00000574408 WWC2Q6AWC2 1192 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 STYK1Q6J9G0 422 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 CDC42EP5Q6NZY7 148 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 USP17L2Q6R6M4 530 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 PODNQ7Z5L7 613 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 KIAA0825Q8IV33 1275 aa11.95□□□□□ -0.5
USP43-205ENST00000574408 HOOK1Q9UJC3 728 aaKnown RBP11.95□□□□□ -0.5
USP43-205ENST00000574408 PCDHA5Q9Y5H7 936 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms