RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 HNRNPH2P55795 449 aaKnown RBP21.62■■□□□ 1.05
SCARF1-206ENST00000573852 XDHP47989 1333 aa21.62■■□□□ 1.05
SCARF1-206ENST00000573852 CHRNDQ07001 517 aa21.62■■□□□ 1.05
SCARF1-206ENST00000573852 PTGDRQ13258 359 aa21.62■■□□□ 1.05
SCARF1-206ENST00000573852 TTC38Q5R3I4 469 aa21.62■■□□□ 1.05
SCARF1-206ENST00000573852 IFIT1BQ5T764 474 aaKnown RBP21.62■■□□□ 1.05
SCARF1-206ENST00000573852 ACRBPQ8NEB7 543 aa21.62■■□□□ 1.05
SCARF1-206ENST00000573852 NEK11Q8NG66 645 aa21.62■■□□□ 1.05
SCARF1-206ENST00000573852 BLZF1Q9H2G9 400 aa21.62■■□□□ 1.05
SCARF1-206ENST00000573852 ANKZF1Q9H8Y5 726 aa21.62■■□□□ 1.05
SCARF1-206ENST00000573852 MYH8P13535 1937 aa21.61■■□□□ 1.05
SCARF1-206ENST00000573852 CCDC151A5D8V7 595 aa21.61■■□□□ 1.05
SCARF1-206ENST00000573852 IGHMBP2P38935 993 aaKnown RBP21.61■■□□□ 1.05
SCARF1-206ENST00000573852 JAKMIP3Q5VZ66 844 aa21.61■■□□□ 1.05
SCARF1-206ENST00000573852 CATIPQ7Z7H3 387 aa21.61■■□□□ 1.05
SCARF1-206ENST00000573852 RNF225M0QZC1 329 aaPredicted RBP21.61■■□□□ 1.05
SCARF1-206ENST00000573852 BMP15O95972 392 aa21.61■■□□□ 1.05
SCARF1-206ENST00000573852 TFRCP02786 760 aaKnown RBP21.61■■□□□ 1.05
SCARF1-206ENST00000573852 TROAPQ12815 778 aa21.61■■□□□ 1.05
SCARF1-206ENST00000573852 KRT31Q15323 416 aa21.61■■□□□ 1.05
SCARF1-206ENST00000573852 CNGA4Q8IV77 575 aa21.61■■□□□ 1.05
SCARF1-206ENST00000573852 BCL9LQ86UU0 1499 aa21.6■■□□□ 1.05
SCARF1-206ENST00000573852 FECHP22830 423 aa21.6■■□□□ 1.05
SCARF1-206ENST00000573852 CDC25AP30304 524 aa21.6■■□□□ 1.05
SCARF1-206ENST00000573852 BRD3Q15059 726 aa21.6■■□□□ 1.05
SCARF1-206ENST00000573852 E2F4Q16254 413 aa21.6■■□□□ 1.05
SCARF1-206ENST00000573852 CCDC152Q4G0S7 254 aa21.6■■□□□ 1.05
SCARF1-206ENST00000573852 RIOK1Q9BRS2 568 aaKnown RBP21.6■■□□□ 1.05
SCARF1-206ENST00000573852 BTG4Q9NY30 223 aa21.6■■□□□ 1.05
SCARF1-206ENST00000573852 BAZ2AQ9UIF9 1905 aaKnown RBP21.6■■□□□ 1.05
SCARF1-206ENST00000573852 WTIPA6NIX2 430 aaPredicted RBP21.6■■□□□ 1.05
SCARF1-206ENST00000573852 EIF5P55010 431 aaKnown RBP21.6■■□□□ 1.05
SCARF1-206ENST00000573852 ERVK-24P63145 666 aa21.6■■□□□ 1.05
SCARF1-206ENST00000573852 DYNLL1P63167 89 aaKnown RBP21.6■■□□□ 1.05
SCARF1-206ENST00000573852 ATP2C1P98194 919 aaPredicted RBP21.6■■□□□ 1.05
SCARF1-206ENST00000573852 CDC5LQ99459 802 aaKnown RBP21.6■■□□□ 1.05
SCARF1-206ENST00000573852 ITIH6Q6UXX5 1313 aa21.59■■□□□ 1.05
SCARF1-206ENST00000573852 KIF4BQ2VIQ3 1234 aa21.59■■□□□ 1.05
SCARF1-206ENST00000573852 SLC35F6Q8N357 371 aa21.59■■□□□ 1.05
SCARF1-206ENST00000573852 MTRQ99707 1265 aa21.59■■□□□ 1.05
SCARF1-206ENST00000573852 BAZ2BQ9UIF8 2168 aaKnown RBP21.59■■□□□ 1.05
SCARF1-206ENST00000573852 MAP2K7O14733 419 aa21.59■■□□□ 1.05
SCARF1-206ENST00000573852 GYS2P54840 703 aa21.59■■□□□ 1.05
SCARF1-206ENST00000573852 RRAGBQ5VZM2 374 aa21.59■■□□□ 1.05
SCARF1-206ENST00000573852 CEP112Q8N8E3 955 aa21.59■■□□□ 1.05
SCARF1-206ENST00000573852 CCDC51Q96ER9 411 aa21.59■■□□□ 1.05
SCARF1-206ENST00000573852 PNKPQ96T60 521 aa21.59■■□□□ 1.05
SCARF1-206ENST00000573852 VPS16Q9H269 839 aa21.59■■□□□ 1.05
SCARF1-206ENST00000573852 LIMA1Q9UHB6 759 aaKnown RBP21.59■■□□□ 1.05
SCARF1-206ENST00000573852 DUOX1Q9NRD9 1551 aa21.58■■□□□ 1.05
SCARF1-206ENST00000573852 N4BP3O15049 544 aa21.58■■□□□ 1.05
SCARF1-206ENST00000573852 HSPA2P54652 639 aa21.58■■□□□ 1.05
SCARF1-206ENST00000573852 BRMS1Q9HCU9 246 aa21.58■■□□□ 1.05
SCARF1-206ENST00000573852 RBM28Q9NW13 759 aaKnown RBP21.58■■□□□ 1.05
SCARF1-206ENST00000573852 CTAGE9A4FU28 777 aa21.58■■□□□ 1.04
SCARF1-206ENST00000573852 LRRC10BA6NIK2 292 aa21.58■■□□□ 1.04
SCARF1-206ENST00000573852 H3BQF6 201 aa21.58■■□□□ 1.04
SCARF1-206ENST00000573852 ZBTB22O15209 634 aa21.58■■□□□ 1.04
SCARF1-206ENST00000573852 GYG1P46976 350 aa21.58■■□□□ 1.04
SCARF1-206ENST00000573852 IL17AQ16552 155 aa21.58■■□□□ 1.04
SCARF1-206ENST00000573852 PDXDC2PQ6P474 469 aa21.58■■□□□ 1.04
SCARF1-206ENST00000573852 TMTC3Q6ZXV5 915 aa21.58■■□□□ 1.04
SCARF1-206ENST00000573852 COL4A1P02462 1669 aa21.58■■□□□ 1.04
SCARF1-206ENST00000573852 CICQ96RK0 1608 aaPredicted RBP21.57■■□□□ 1.04
SCARF1-206ENST00000573852 ADAMTS3O15072 1205 aa21.57■■□□□ 1.04
SCARF1-206ENST00000573852 ABHD10Q9NUJ1 306 aa21.57■■□□□ 1.04
SCARF1-206ENST00000573852 TTF2Q9UNY4 1162 aaKnown RBP21.57■■□□□ 1.04
SCARF1-206ENST00000573852 EVX2Q03828 476 aa21.57■■□□□ 1.04
SCARF1-206ENST00000573852 BEND6Q5SZJ8 279 aaPredicted RBP21.57■■□□□ 1.04
SCARF1-206ENST00000573852 INTS5Q6P9B9 1019 aaKnown RBP21.57■■□□□ 1.04
SCARF1-206ENST00000573852 SRBD1Q8N5C6 995 aaKnown RBP21.57■■□□□ 1.04
SCARF1-206ENST00000573852 IQUBQ8NA54 791 aa21.57■■□□□ 1.04
SCARF1-206ENST00000573852 TAB2Q9NYJ8 693 aa21.57■■□□□ 1.04
SCARF1-206ENST00000573852 COPB1P53618 953 aaKnown RBP21.56■■□□□ 1.04
SCARF1-206ENST00000573852 IQCA1Q86XH1 822 aa21.56■■□□□ 1.04
SCARF1-206ENST00000573852 TMTC1Q8IUR5 882 aa21.56■■□□□ 1.04
SCARF1-206ENST00000573852 MSANTD4Q8NCY6 345 aa21.56■■□□□ 1.04
SCARF1-206ENST00000573852 CNTNAP5Q8WYK1 1306 aa21.56■■□□□ 1.04
SCARF1-206ENST00000573852 COL1A1P02452 1464 aaPredicted RBP21.56■■□□□ 1.04
SCARF1-206ENST00000573852 VEGFAP15692 232 aaPredicted RBP21.56■■□□□ 1.04
SCARF1-206ENST00000573852 ARHGAP25P42331 645 aa21.56■■□□□ 1.04
SCARF1-206ENST00000573852 HNRNPLLQ8WVV9 542 aaKnown RBP21.56■■□□□ 1.04
SCARF1-206ENST00000573852 RWDD2AQ9UIY3 292 aa21.56■■□□□ 1.04
SCARF1-206ENST00000573852 RAB21Q9UL25 225 aa21.56■■□□□ 1.04
SCARF1-206ENST00000573852 ZNF804BA4D1E1 1349 aa21.56■■□□□ 1.04
SCARF1-206ENST00000573852 DISP2A7MBM2 1401 aa21.55■■□□□ 1.04
SCARF1-206ENST00000573852 PIK3AP1Q6ZUJ8 805 aa21.55■■□□□ 1.04
SCARF1-206ENST00000573852 TXLNBQ8N3L3 684 aa21.55■■□□□ 1.04
SCARF1-206ENST00000573852 CACNA1SQ13698 1873 aa21.55■■□□□ 1.04
SCARF1-206ENST00000573852 CALM1P0DP23 149 aa21.55■■□□□ 1.04
SCARF1-206ENST00000573852 CALM2P0DP24 149 aa21.55■■□□□ 1.04
SCARF1-206ENST00000573852 CALM3P0DP25 149 aa21.55■■□□□ 1.04
SCARF1-206ENST00000573852 USP5P45974 858 aa21.55■■□□□ 1.04
SCARF1-206ENST00000573852 ZNF384Q8TF68 577 aa21.55■■□□□ 1.04
SCARF1-206ENST00000573852 NMT2O60551 498 aa21.54■■□□□ 1.04
SCARF1-206ENST00000573852 NTSR2O95665 410 aa21.54■■□□□ 1.04
SCARF1-206ENST00000573852 FGRP09769 529 aa21.54■■□□□ 1.04
SCARF1-206ENST00000573852 MCM7P33993 719 aa21.54■■□□□ 1.04
SCARF1-206ENST00000573852 PAK1Q13153 545 aa21.54■■□□□ 1.04
SCARF1-206ENST00000573852 TUBB2AQ13885 445 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms