RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 CHST3Q7LGC8 479 aa13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 ENOX1Q8TC92 643 aaKnown RBP13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 TPCN1Q9ULQ1 816 aa13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 YWHAEP62258 255 aaKnown RBP13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 ZNF654Q8IZM8 581 aa13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 RAB3IPQ96QF0 476 aaPredicted RBP13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 SEC62Q99442 399 aaKnown RBP13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 ZNF215Q9UL58 517 aaPredicted RBP13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 TAF5LO75529 589 aa13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 ABCD1P33897 745 aa13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 ZMYM1Q5SVZ6 1142 aa13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 CCDC170Q8IYT3 715 aa13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 AFAP1L2Q8N4X5 818 aa13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 TSC1Q92574 1164 aa13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 RTCBQ9Y3I0 505 aaKnown RBP13.73□□□□□ -0.21
PCDHGA9-201ENST00000573521 KCNJ18B7U540 433 aa13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 NOL3O60936 208 aaKnown RBP13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 KCNJ12Q14500 433 aa13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 RBM17Q96I25 401 aaKnown RBP13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 BPIFA3Q9BQP9 254 aa13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 AMFRQ9UKV5 643 aa13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 PCDHA7Q9UN72 937 aa13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 HECW2Q9P2P5 1572 aa13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 BUB1BO60566 1050 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 NR1I2O75469 434 aa13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 VIMP08670 466 aaKnown RBP13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 EEF2P13639 858 aaKnown RBP13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 VCX3BQ9H321 246 aa13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 TMOD4Q9NZQ9 345 aa13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 SSX2IPQ9Y2D8 614 aa13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 BCORL1Q5H9F3 1711 aa13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 HSPD1P10809 573 aaKnown RBP13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 SND1Q7KZF4 910 aaKnown RBP eCLIP13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 PEX26Q7Z412 305 aa13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 TEX11Q8IYF3 940 aa13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 KCNK9Q9NPC2 374 aa13.72□□□□□ -0.21
PCDHGA9-201ENST00000573521 TLDC2A0PJX2 215 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 DCAF8L1A6NGE4 600 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 CCDC169A6NNP5 214 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 PLCB3Q01970 1234 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 REXO1Q8N1G1 1221 aaKnown RBP13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 EVI5O60447 810 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 RNASELQ05823 741 aaKnown RBP13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 MORC3Q14149 939 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 SNX29Q8TEQ0 813 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 LRRC59Q96AG4 307 aaKnown RBP13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 PANX2Q96RD6 677 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 ARHGEF10LQ9HCE6 1279 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 KIF3CO14782 793 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 JAK2O60674 1132 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 MAP7D1Q3KQU3 841 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 DENND2CQ68D51 928 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 GAS2L3Q86XJ1 694 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 CDAN1Q8IWY9 1227 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 SLFN12Q8IYM2 578 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 FANCBQ8NB91 859 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 PHF23Q9BUL5 403 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 MIS12Q9H081 205 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 NCOA5Q9HCD5 579 aaKnown RBP13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 RIC8AQ9NPQ8 531 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 CPSF2Q9P2I0 782 aaKnown RBP13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 SERTAD1Q9UHV2 236 aa13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 EPN1Q9Y6I3 576 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA9-201ENST00000573521 TET3O43151 1660 aa13.71□□□□□ -0.22
PCDHGA9-201ENST00000573521 PDIA3P30101 505 aaKnown RBP13.71□□□□□ -0.22
PCDHGA9-201ENST00000573521 PDE6BP35913 854 aa13.71□□□□□ -0.22
PCDHGA9-201ENST00000573521 KCNJ6P48051 423 aa13.71□□□□□ -0.22
PCDHGA9-201ENST00000573521 CALCRLQ16602 461 aa13.71□□□□□ -0.22
PCDHGA9-201ENST00000573521 EFCAB13Q8IY85 973 aa13.71□□□□□ -0.22
PCDHGA9-201ENST00000573521 RGS22Q8NE09 1264 aa13.71□□□□□ -0.22
PCDHGA9-201ENST00000573521 EAF2Q96CJ1 260 aaPredicted RBP13.71□□□□□ -0.22
PCDHGA9-201ENST00000573521 TAB2Q9NYJ8 693 aa13.71□□□□□ -0.22
PCDHGA9-201ENST00000573521 RIMBP3CA6NJZ7 1639 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 RIMBP3BA6NNM3 1639 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 IQGAP3Q86VI3 1631 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 RIMBP3Q9UFD9 1639 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 ZNF532Q9HCE3 1301 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 LUC7L3O95232 432 aaKnown RBP13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 ARID5AQ03989 594 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 FNBP1Q96RU3 617 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 PAIP2Q9BPZ3 127 aaKnown RBP13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 STAT1P42224 750 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 NEDD9Q14511 834 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 CHRNA2Q15822 529 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 CCDC62Q6P9F0 684 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 PAXIP1Q6ZW49 1069 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 MYOCDQ8IZQ8 938 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 JARID2Q92833 1246 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 TEKT1Q969V4 418 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 PDLIM2Q96JY6 352 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 MAP7Q14244 749 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 BLIDQ8IZY5 108 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 MIGA1Q8NAN2 632 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 SLF1Q9BQI6 1058 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 PCDHB13Q9Y5F0 798 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 POLA2Q14181 598 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 GKAP1Q5VSY0 366 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 FAM169AQ9Y6X4 670 aa13.7□□□□□ -0.22
PCDHGA9-201ENST00000573521 KIF1BO60333 1816 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms