RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 U2AF1L4Q8WU68 220 aaKnown RBP15.19■□□□□ 0.02
NPLOC4-213ENST00000573519 SOCS4Q8WXH5 440 aa15.19■□□□□ 0.02
NPLOC4-213ENST00000573519 SHISA4Q96DD7 197 aa15.19■□□□□ 0.02
NPLOC4-213ENST00000573519 RWDD1Q9H446 243 aaPredicted RBP15.19■□□□□ 0.02
NPLOC4-213ENST00000573519 EPB41L4AQ9HCS5 686 aaPredicted RBP15.19■□□□□ 0.02
NPLOC4-213ENST00000573519 BRCA2P51587 3418 aa15.18■□□□□ 0.02
NPLOC4-213ENST00000573519 SALL3Q9BXA9 1300 aa15.18■□□□□ 0.02
NPLOC4-213ENST00000573519 SPDYE16A6NNV3 312 aaPredicted RBP15.18■□□□□ 0.02
NPLOC4-213ENST00000573519 PATL2C9JE40 543 aaKnown RBP15.18■□□□□ 0.02
NPLOC4-213ENST00000573519 EEF2P13639 858 aaKnown RBP15.18■□□□□ 0.02
NPLOC4-213ENST00000573519 COG2Q14746 738 aa15.18■□□□□ 0.02
NPLOC4-213ENST00000573519 KIAA1755Q5JYT7 1200 aa15.18■□□□□ 0.02
NPLOC4-213ENST00000573519 SIAH1Q8IUQ4 282 aa15.18■□□□□ 0.02
NPLOC4-213ENST00000573519 IFNL3Q8IZI9 196 aa15.18■□□□□ 0.02
NPLOC4-213ENST00000573519 DEFB118Q96PH6 123 aa15.18■□□□□ 0.02
NPLOC4-213ENST00000573519 NACAP1Q9BZK3 213 aa15.18■□□□□ 0.02
NPLOC4-213ENST00000573519 LNPKQ9C0E8 428 aa15.18■□□□□ 0.02
NPLOC4-213ENST00000573519 VCPKMTQ9H867 229 aa15.18■□□□□ 0.02
NPLOC4-213ENST00000573519 KANSL2Q9H9L4 492 aa15.18■□□□□ 0.02
NPLOC4-213ENST00000573519 BTBD7Q9P203 1132 aa15.18■□□□□ 0.02
NPLOC4-213ENST00000573519 TMX2Q9Y320 296 aa15.18■□□□□ 0.02
NPLOC4-213ENST00000573519 FLOT1O75955 427 aa15.17■□□□□ 0.02
NPLOC4-213ENST00000573519 SGPL1O95470 568 aa15.17■□□□□ 0.02
NPLOC4-213ENST00000573519 IGHDP01880 384 aa15.17■□□□□ 0.02
NPLOC4-213ENST00000573519 TFRCP02786 760 aaKnown RBP15.17■□□□□ 0.02
NPLOC4-213ENST00000573519 RGS2P41220 211 aa15.17■□□□□ 0.02
NPLOC4-213ENST00000573519 PDE1AP54750 535 aa15.17■□□□□ 0.02
NPLOC4-213ENST00000573519 TRIM32Q13049 653 aa15.17■□□□□ 0.02
NPLOC4-213ENST00000573519 ZMYM1Q5SVZ6 1142 aa15.17■□□□□ 0.02
NPLOC4-213ENST00000573519 TRIB2Q92519 343 aa15.17■□□□□ 0.02
NPLOC4-213ENST00000573519 LPAR1Q92633 364 aa15.17■□□□□ 0.02
NPLOC4-213ENST00000573519 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.17■□□□□ 0.02
NPLOC4-213ENST00000573519 HOXC10Q9NYD6 342 aa15.17■□□□□ 0.02
NPLOC4-213ENST00000573519 PRDM1O75626 825 aa15.16■□□□□ 0.02
NPLOC4-213ENST00000573519 ZKSCAN1P17029 563 aaPredicted RBP15.16■□□□□ 0.02
NPLOC4-213ENST00000573519 RASA1P20936 1047 aa15.16■□□□□ 0.02
NPLOC4-213ENST00000573519 PLS1Q14651 629 aa15.16■□□□□ 0.02
NPLOC4-213ENST00000573519 LBX2Q6XYB7 198 aa15.16■□□□□ 0.02
NPLOC4-213ENST00000573519 CCDC129Q6ZRS4 1044 aa15.16■□□□□ 0.02
NPLOC4-213ENST00000573519 ZNF444Q8N0Y2 327 aaPredicted RBP15.16■□□□□ 0.02
NPLOC4-213ENST00000573519 EVI5LQ96CN4 794 aa15.16■□□□□ 0.02
NPLOC4-213ENST00000573519 NAPBQ9H115 298 aa15.16■□□□□ 0.02
NPLOC4-213ENST00000573519 ZNF287Q9HBT7 754 aa15.16■□□□□ 0.02
NPLOC4-213ENST00000573519 GOPCQ9HD26 462 aa15.16■□□□□ 0.02
NPLOC4-213ENST00000573519 HMX1Q9NP08 348 aaPredicted RBP15.16■□□□□ 0.02
NPLOC4-213ENST00000573519 STAP2Q9UGK3 403 aa15.16■□□□□ 0.02
NPLOC4-213ENST00000573519 IVNS1ABPQ9Y6Y0 642 aa15.16■□□□□ 0.02
NPLOC4-213ENST00000573519 ROBO3Q96MS0 1386 aa15.15■□□□□ 0.02
NPLOC4-213ENST00000573519 WDR46O15213 610 aaKnown RBP15.15■□□□□ 0.02
NPLOC4-213ENST00000573519 FARP2O94887 1054 aaPredicted RBP15.15■□□□□ 0.02
NPLOC4-213ENST00000573519 MORN1Q5T089 497 aa15.15■□□□□ 0.02
NPLOC4-213ENST00000573519 DPF3Q92784 378 aa15.15■□□□□ 0.02
NPLOC4-213ENST00000573519 APBA2Q99767 749 aa15.15■□□□□ 0.02
NPLOC4-213ENST00000573519 PAK6Q9NQU5 681 aaPredicted RBP15.15■□□□□ 0.02
NPLOC4-213ENST00000573519 PLXNB2O15031 1838 aa15.15■□□□□ 0.02
NPLOC4-213ENST00000573519 TRIM6-TRIM34B2RNG4 842 aa15.14■□□□□ 0.01
NPLOC4-213ENST00000573519 SLC3A2P08195 630 aaKnown RBP15.14■□□□□ 0.01
NPLOC4-213ENST00000573519 XRCC5P13010 732 aaKnown RBP15.14■□□□□ 0.01
NPLOC4-213ENST00000573519 PRKAR2AP13861 404 aaKnown RBP15.14■□□□□ 0.01
NPLOC4-213ENST00000573519 DSG3P32926 999 aa15.14■□□□□ 0.01
NPLOC4-213ENST00000573519 MAP2K5Q13163 448 aa15.14■□□□□ 0.01
NPLOC4-213ENST00000573519 CCL14Q16627 93 aa15.14■□□□□ 0.01
NPLOC4-213ENST00000573519 TRMT44Q8IYL2 757 aaKnown RBP15.14■□□□□ 0.01
NPLOC4-213ENST00000573519 ATG4CQ96DT6 458 aa15.14■□□□□ 0.01
NPLOC4-213ENST00000573519 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.14■□□□□ 0.01
NPLOC4-213ENST00000573519 RPTORQ8N122 1335 aa15.14■□□□□ 0.01
NPLOC4-213ENST00000573519 SLC15A5A6NIM6 579 aa15.13■□□□□ 0.01
NPLOC4-213ENST00000573519 PTPREP23469 700 aa15.13■□□□□ 0.01
NPLOC4-213ENST00000573519 PDE4BQ07343 736 aa15.13■□□□□ 0.01
NPLOC4-213ENST00000573519 PPARAQ07869 468 aa15.13■□□□□ 0.01
NPLOC4-213ENST00000573519 FAM83BQ5T0W9 1011 aa15.13■□□□□ 0.01
NPLOC4-213ENST00000573519 CHD1LQ86WJ1 897 aa15.13■□□□□ 0.01
NPLOC4-213ENST00000573519 SMC5Q8IY18 1101 aa15.13■□□□□ 0.01
NPLOC4-213ENST00000573519 MB21D1Q8N884 522 aa15.13■□□□□ 0.01
NPLOC4-213ENST00000573519 USP6NLQ92738 828 aa15.13■□□□□ 0.01
NPLOC4-213ENST00000573519 RILPL2Q969X0 211 aa15.13■□□□□ 0.01
NPLOC4-213ENST00000573519 MOV10L1Q9BXT6 1211 aaKnown RBP15.13■□□□□ 0.01
NPLOC4-213ENST00000573519 SPATC1LQ9H0A9 340 aa15.13■□□□□ 0.01
NPLOC4-213ENST00000573519 CLIP2Q9UDT6 1046 aa15.13■□□□□ 0.01
NPLOC4-213ENST00000573519 TSPY3P0CV98 308 aa15.12■□□□□ 0.01
NPLOC4-213ENST00000573519 TSPY8P0CW00 308 aa15.12■□□□□ 0.01
NPLOC4-213ENST00000573519 ERCC3P19447 782 aa15.12■□□□□ 0.01
NPLOC4-213ENST00000573519 FAM47AQ5JRC9 791 aa15.12■□□□□ 0.01
NPLOC4-213ENST00000573519 NCAPG2Q86XI2 1143 aa15.12■□□□□ 0.01
NPLOC4-213ENST00000573519 NUP88Q99567 741 aaPredicted RBP15.12■□□□□ 0.01
NPLOC4-213ENST00000573519 HTATIP2Q9BUP3 242 aa15.12■□□□□ 0.01
NPLOC4-213ENST00000573519 FBXO28Q9NVF7 368 aa15.12■□□□□ 0.01
NPLOC4-213ENST00000573519 NYAP2Q9P242 653 aa15.12■□□□□ 0.01
NPLOC4-213ENST00000573519 KIAA0100Q14667 2235 aaKnown RBP15.11■□□□□ 0.01
NPLOC4-213ENST00000573519 CACNB2Q08289 660 aaPredicted RBP15.11■□□□□ 0.01
NPLOC4-213ENST00000573519 GRB14Q14449 540 aa15.11■□□□□ 0.01
NPLOC4-213ENST00000573519 VPS53Q5VIR6 699 aa15.11■□□□□ 0.01
NPLOC4-213ENST00000573519 DPP9Q86TI2 863 aa15.11■□□□□ 0.01
NPLOC4-213ENST00000573519 FAM227BQ96M60 508 aa15.11■□□□□ 0.01
NPLOC4-213ENST00000573519 HELLSQ9NRZ9 838 aa15.11■□□□□ 0.01
NPLOC4-213ENST00000573519 DOCK3Q8IZD9 2030 aa15.1■□□□□ 0.01
NPLOC4-213ENST00000573519 A0A0G2JMZ2 1700 aa15.1■□□□□ 0.01
NPLOC4-213ENST00000573519 A0A0D9SFI3 127 aa15.1■□□□□ 0.01
NPLOC4-213ENST00000573519 F5H6K3 240 aa15.1■□□□□ 0.01
NPLOC4-213ENST00000573519 CCND3P30281 292 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms