RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 PLEKHH3Q7Z736 793 aa11.57□□□□□ -0.56
NPLOC4-212ENST00000573328 TRIB2Q92519 343 aa11.57□□□□□ -0.56
NPLOC4-212ENST00000573328 CCDC17Q96LX7 622 aa11.57□□□□□ -0.56
NPLOC4-212ENST00000573328 FSD1Q9BTV5 496 aa11.57□□□□□ -0.56
NPLOC4-212ENST00000573328 HMX1Q9NP08 348 aaPredicted RBP11.57□□□□□ -0.56
NPLOC4-212ENST00000573328 GJD2Q9UKL4 321 aa11.57□□□□□ -0.56
NPLOC4-212ENST00000573328 ZNF236Q9UL36 1845 aa11.57□□□□□ -0.56
NPLOC4-212ENST00000573328 A0A1W2PRG0 241 aa11.56□□□□□ -0.56
NPLOC4-212ENST00000573328 SPDYE16A6NNV3 312 aaPredicted RBP11.56□□□□□ -0.56
NPLOC4-212ENST00000573328 MINDY4BA8MYZ0 360 aa11.56□□□□□ -0.56
NPLOC4-212ENST00000573328 SMIM22K7EJ46 135 aa11.56□□□□□ -0.56
NPLOC4-212ENST00000573328 GPAA1O43292 621 aa11.56□□□□□ -0.56
NPLOC4-212ENST00000573328 APPP05067 770 aa11.56□□□□□ -0.56
NPLOC4-212ENST00000573328 MX1P20591 662 aa11.56□□□□□ -0.56
NPLOC4-212ENST00000573328 TRIM32Q13049 653 aa11.56□□□□□ -0.56
NPLOC4-212ENST00000573328 SPICE1Q8N0Z3 855 aa11.56□□□□□ -0.56
NPLOC4-212ENST00000573328 STRBPQ96SI9 672 aaKnown RBP11.56□□□□□ -0.56
NPLOC4-212ENST00000573328 APBA2Q99767 749 aa11.56□□□□□ -0.56
NPLOC4-212ENST00000573328 PAK6Q9NQU5 681 aaPredicted RBP11.56□□□□□ -0.56
NPLOC4-212ENST00000573328 RPTORQ8N122 1335 aa11.56□□□□□ -0.56
NPLOC4-212ENST00000573328 M0R2C6 588 aa11.55□□□□□ -0.56
NPLOC4-212ENST00000573328 CNMDO75829 334 aa11.55□□□□□ -0.56
NPLOC4-212ENST00000573328 FLOT1O75955 427 aa11.55□□□□□ -0.56
NPLOC4-212ENST00000573328 PRKAR2AP13861 404 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-212ENST00000573328 GNAT2P19087 354 aa11.55□□□□□ -0.56
NPLOC4-212ENST00000573328 PLS1Q14651 629 aa11.55□□□□□ -0.56
NPLOC4-212ENST00000573328 ANKRD45Q5TZF3 282 aa11.55□□□□□ -0.56
NPLOC4-212ENST00000573328 TRMT44Q8IYL2 757 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-212ENST00000573328 OTUD7AQ8TE49 926 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-212ENST00000573328 LPAR1Q92633 364 aa11.55□□□□□ -0.56
NPLOC4-212ENST00000573328 OSBP2Q969R2 916 aa11.55□□□□□ -0.56
NPLOC4-212ENST00000573328 VCPKMTQ9H867 229 aa11.55□□□□□ -0.56
NPLOC4-212ENST00000573328 MKNK2Q9HBH9 465 aa11.55□□□□□ -0.56
NPLOC4-212ENST00000573328 GSG1L2A8MUP6 293 aa11.54□□□□□ -0.56
NPLOC4-212ENST00000573328 XRCC5P13010 732 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-212ENST00000573328 EEF2P13639 858 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-212ENST00000573328 MAP2K5Q13163 448 aa11.54□□□□□ -0.56
NPLOC4-212ENST00000573328 COG2Q14746 738 aa11.54□□□□□ -0.56
NPLOC4-212ENST00000573328 MORN1Q5T089 497 aa11.54□□□□□ -0.56
NPLOC4-212ENST00000573328 GIMAP6Q6P9H5 292 aa11.54□□□□□ -0.56
NPLOC4-212ENST00000573328 LBX2Q6XYB7 198 aa11.54□□□□□ -0.56
NPLOC4-212ENST00000573328 PI4K2BQ8TCG2 481 aa11.54□□□□□ -0.56
NPLOC4-212ENST00000573328 KANSL2Q9H9L4 492 aa11.54□□□□□ -0.56
NPLOC4-212ENST00000573328 GOPCQ9HD26 462 aa11.54□□□□□ -0.56
NPLOC4-212ENST00000573328 HOXC10Q9NYD6 342 aa11.54□□□□□ -0.56
NPLOC4-212ENST00000573328 BTBD7Q9P203 1132 aa11.54□□□□□ -0.56
NPLOC4-212ENST00000573328 TMX2Q9Y320 296 aa11.54□□□□□ -0.56
NPLOC4-212ENST00000573328 ROBO3Q96MS0 1386 aa11.54□□□□□ -0.56
NPLOC4-212ENST00000573328 SLC15A5A6NIM6 579 aa11.53□□□□□ -0.56
NPLOC4-212ENST00000573328 H0YGN5 161 aa11.53□□□□□ -0.56
NPLOC4-212ENST00000573328 WDR46O15213 610 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-212ENST00000573328 CAPN2P17655 700 aa11.53□□□□□ -0.56
NPLOC4-212ENST00000573328 CCL14Q16627 93 aa11.53□□□□□ -0.56
NPLOC4-212ENST00000573328 SBK1Q52WX2 424 aa11.53□□□□□ -0.56
NPLOC4-212ENST00000573328 KIAA1755Q5JYT7 1200 aa11.53□□□□□ -0.56
NPLOC4-212ENST00000573328 POTEEQ6S8J3 1075 aa11.53□□□□□ -0.56
NPLOC4-212ENST00000573328 NECAB2Q7Z6G3 386 aa11.53□□□□□ -0.56
NPLOC4-212ENST00000573328 PAWRQ96IZ0 340 aaKnown RBP11.53□□□□□ -0.56
NPLOC4-212ENST00000573328 NACAP1Q9BZK3 213 aa11.53□□□□□ -0.56
NPLOC4-212ENST00000573328 ZNF287Q9HBT7 754 aa11.53□□□□□ -0.56
NPLOC4-212ENST00000573328 EPB41L4AQ9HCS5 686 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-212ENST00000573328 RASA1P20936 1047 aa11.52□□□□□ -0.57
NPLOC4-212ENST00000573328 PTPREP23469 700 aa11.52□□□□□ -0.57
NPLOC4-212ENST00000573328 DSG3P32926 999 aa11.52□□□□□ -0.57
NPLOC4-212ENST00000573328 CACNB2Q08289 660 aaPredicted RBP11.52□□□□□ -0.57
NPLOC4-212ENST00000573328 HABP4Q5JVS0 413 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-212ENST00000573328 MFSD14CQ5VZR4 134 aa11.52□□□□□ -0.57
NPLOC4-212ENST00000573328 UBE2Q1Q7Z7E8 422 aa11.52□□□□□ -0.57
NPLOC4-212ENST00000573328 DPP9Q86TI2 863 aa11.52□□□□□ -0.57
NPLOC4-212ENST00000573328 NCAPG2Q86XI2 1143 aa11.52□□□□□ -0.57
NPLOC4-212ENST00000573328 MB21D1Q8N884 522 aa11.52□□□□□ -0.57
NPLOC4-212ENST00000573328 DIS3LQ8TF46 1054 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-212ENST00000573328 USP6NLQ92738 828 aa11.52□□□□□ -0.57
NPLOC4-212ENST00000573328 ATG4CQ96DT6 458 aa11.52□□□□□ -0.57
NPLOC4-212ENST00000573328 SEC62Q99442 399 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-212ENST00000573328 MOV10L1Q9BXT6 1211 aaKnown RBP11.52□□□□□ -0.57
NPLOC4-212ENST00000573328 SPATC1LQ9H0A9 340 aa11.52□□□□□ -0.57
NPLOC4-212ENST00000573328 NAPBQ9H115 298 aa11.52□□□□□ -0.57
NPLOC4-212ENST00000573328 NR2E3Q9Y5X4 410 aa11.52□□□□□ -0.57
NPLOC4-212ENST00000573328 PATL2C9JE40 543 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-212ENST00000573328 EVI5O60447 810 aa11.51□□□□□ -0.57
NPLOC4-212ENST00000573328 PRDM1O75626 825 aa11.51□□□□□ -0.57
NPLOC4-212ENST00000573328 SLC3A2P08195 630 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-212ENST00000573328 ERCC3P19447 782 aa11.51□□□□□ -0.57
NPLOC4-212ENST00000573328 CNGA1P29973 690 aa11.51□□□□□ -0.57
NPLOC4-212ENST00000573328 GRB14Q14449 540 aa11.51□□□□□ -0.57
NPLOC4-212ENST00000573328 FAM83BQ5T0W9 1011 aa11.51□□□□□ -0.57
NPLOC4-212ENST00000573328 SIAH1Q8IUQ4 282 aa11.51□□□□□ -0.57
NPLOC4-212ENST00000573328 IFNL3Q8IZI9 196 aa11.51□□□□□ -0.57
NPLOC4-212ENST00000573328 ZNF444Q8N0Y2 327 aaPredicted RBP11.51□□□□□ -0.57
NPLOC4-212ENST00000573328 ANKLE1Q8NAG6 615 aa11.51□□□□□ -0.57
NPLOC4-212ENST00000573328 CRISPLD2Q9H0B8 497 aa11.51□□□□□ -0.57
NPLOC4-212ENST00000573328 ISY1Q9ULR0 285 aaKnown RBP11.51□□□□□ -0.57
NPLOC4-212ENST00000573328 ADORA2AP29274 412 aa11.5□□□□□ -0.57
NPLOC4-212ENST00000573328 CCND3P30281 292 aaPredicted RBP11.5□□□□□ -0.57
NPLOC4-212ENST00000573328 PDE4BQ07343 736 aa11.5□□□□□ -0.57
NPLOC4-212ENST00000573328 HDAC1Q13547 482 aaPredicted RBP11.5□□□□□ -0.57
NPLOC4-212ENST00000573328 ZMYM1Q5SVZ6 1142 aa11.5□□□□□ -0.57
NPLOC4-212ENST00000573328 MAP3K21Q5TCX8 1036 aa11.5□□□□□ -0.57
NPLOC4-212ENST00000573328 CHRDL2Q6WN34 429 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms