RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 CCDC85BQ15834 202 aaPredicted RBP6.17□□□□□ -1.42
ERCC4-204ENST00000573018 SKOR2Q2VWA4 1001 aaPredicted RBP6.17□□□□□ -1.42
ERCC4-204ENST00000573018 ADGRF1Q5T601 910 aa6.17□□□□□ -1.42
ERCC4-204ENST00000573018 PRRT2Q7Z6L0 340 aaPredicted RBP6.17□□□□□ -1.42
ERCC4-204ENST00000573018 SPPL2CQ8IUH8 684 aa6.17□□□□□ -1.42
ERCC4-204ENST00000573018 TMEM151BQ8IW70 566 aa6.17□□□□□ -1.42
ERCC4-204ENST00000573018 SHISA4Q96DD7 197 aa6.17□□□□□ -1.42
ERCC4-204ENST00000573018 XYLT2Q9H1B5 865 aa6.17□□□□□ -1.42
ERCC4-204ENST00000573018 KCNH3Q9ULD8 1083 aa6.17□□□□□ -1.42
ERCC4-204ENST00000573018 TACC3Q9Y6A5 838 aa6.17□□□□□ -1.42
ERCC4-204ENST00000573018 OTOL1A6NHN0 477 aaPredicted RBP6.16□□□□□ -1.42
ERCC4-204ENST00000573018 UPK3BL1B0FP48 263 aa6.16□□□□□ -1.42
ERCC4-204ENST00000573018 UPK3BL2E5RIL1 263 aa6.16□□□□□ -1.42
ERCC4-204ENST00000573018 CHRNEQ04844 493 aa6.16□□□□□ -1.42
ERCC4-204ENST00000573018 PDE4BQ07343 736 aa6.16□□□□□ -1.42
ERCC4-204ENST00000573018 VMACQ2NL98 169 aa6.16□□□□□ -1.42
ERCC4-204ENST00000573018 ANKS4BQ8N8V4 417 aa6.16□□□□□ -1.42
ERCC4-204ENST00000573018 CXorf38Q8TB03 319 aa6.16□□□□□ -1.42
ERCC4-204ENST00000573018 FEZF2Q8TBJ5 459 aa6.16□□□□□ -1.42
ERCC4-204ENST00000573018 CORINQ9Y5Q5 1042 aa6.16□□□□□ -1.42
ERCC4-204ENST00000573018 OR14I1A6ND48 311 aa6.15□□□□□ -1.42
ERCC4-204ENST00000573018 SASH1O94885 1247 aa6.15□□□□□ -1.42
ERCC4-204ENST00000573018 RPS26P62854 115 aaKnown RBP6.15□□□□□ -1.42
ERCC4-204ENST00000573018 SRSF3P84103 164 aaKnown RBP6.15□□□□□ -1.42
ERCC4-204ENST00000573018 TEKQ02763 1124 aa6.15□□□□□ -1.42
ERCC4-204ENST00000573018 DUSP4Q13115 394 aa6.15□□□□□ -1.42
ERCC4-204ENST00000573018 SNX17Q15036 470 aa6.15□□□□□ -1.42
ERCC4-204ENST00000573018 GGNQ86UU5 652 aa6.15□□□□□ -1.42
ERCC4-204ENST00000573018 ZDHHC14Q8IZN3 488 aa6.15□□□□□ -1.42
ERCC4-204ENST00000573018 CYB5D2Q8WUJ1 264 aa6.15□□□□□ -1.42
ERCC4-204ENST00000573018 MIR1-1HGQ9H1L0 117 aa6.15□□□□□ -1.42
ERCC4-204ENST00000573018 MBD1Q9UIS9 605 aaPredicted RBP6.15□□□□□ -1.42
ERCC4-204ENST00000573018 IRAK3Q9Y616 596 aa6.15□□□□□ -1.42
ERCC4-204ENST00000573018 SHISA3A0PJX4 238 aa6.14□□□□□ -1.43
ERCC4-204ENST00000573018 EFEMP2O95967 443 aa6.14□□□□□ -1.43
ERCC4-204ENST00000573018 AFF3P51826 1226 aaKnown RBP6.14□□□□□ -1.43
ERCC4-204ENST00000573018 EPHB3P54753 998 aa6.14□□□□□ -1.43
ERCC4-204ENST00000573018 FAM13CQ8NE31 585 aa6.14□□□□□ -1.43
ERCC4-204ENST00000573018 JARID2Q92833 1246 aaPredicted RBP6.14□□□□□ -1.43
ERCC4-204ENST00000573018 SIGLEC10Q96LC7 697 aa6.14□□□□□ -1.43
ERCC4-204ENST00000573018 ADAM30Q9UKF2 790 aa6.14□□□□□ -1.43
ERCC4-204ENST00000573018 NOTOA8MTQ0 251 aa6.13□□□□□ -1.43
ERCC4-204ENST00000573018 USP2O75604 605 aaPredicted RBP6.13□□□□□ -1.43
ERCC4-204ENST00000573018 LIG3P49916 1009 aa6.13□□□□□ -1.43
ERCC4-204ENST00000573018 NFKB2Q00653 900 aa6.13□□□□□ -1.43
ERCC4-204ENST00000573018 AGMOQ6ZNB7 445 aa6.13□□□□□ -1.43
ERCC4-204ENST00000573018 ZSCAN29Q8IWY8 852 aaPredicted RBP6.13□□□□□ -1.43
ERCC4-204ENST00000573018 SIRT5Q9NXA8 310 aa6.13□□□□□ -1.43
ERCC4-204ENST00000573018 TIMELESSQ9UNS1 1208 aa6.13□□□□□ -1.43
ERCC4-204ENST00000573018 CELA3BP08861 270 aa6.12□□□□□ -1.43
ERCC4-204ENST00000573018 PLCG1P19174 1290 aa6.12□□□□□ -1.43
ERCC4-204ENST00000573018 TFE3P19532 575 aaPredicted RBP6.12□□□□□ -1.43
ERCC4-204ENST00000573018 SDHBP21912 280 aa6.12□□□□□ -1.43
ERCC4-204ENST00000573018 TNNI2P48788 182 aa6.12□□□□□ -1.43
ERCC4-204ENST00000573018 RPL6Q02878 288 aaKnown RBP6.12□□□□□ -1.43
ERCC4-204ENST00000573018 TSNAXIP1Q2TAA8 658 aa6.12□□□□□ -1.43
ERCC4-204ENST00000573018 NLRX1Q86UT6 975 aa6.12□□□□□ -1.43
ERCC4-204ENST00000573018 SYT8Q8NBV8 401 aa6.12□□□□□ -1.43
ERCC4-204ENST00000573018 RNF141Q8WVD5 230 aa6.12□□□□□ -1.43
ERCC4-204ENST00000573018 LINC01599Q8WXQ3 324 aa6.12□□□□□ -1.43
ERCC4-204ENST00000573018 DACT3Q96B18 629 aaPredicted RBP6.12□□□□□ -1.43
ERCC4-204ENST00000573018 G6PC3Q9BUM1 346 aa6.12□□□□□ -1.43
ERCC4-204ENST00000573018 GNEQ9Y223 722 aaKnown RBP6.12□□□□□ -1.43
ERCC4-204ENST00000573018 SLC22A31A6NKX4 558 aa6.11□□□□□ -1.43
ERCC4-204ENST00000573018 P4HBP07237 508 aaKnown RBP6.11□□□□□ -1.43
ERCC4-204ENST00000573018 EIF4BP23588 611 aaKnown RBP6.11□□□□□ -1.43
ERCC4-204ENST00000573018 CLEC16AQ2KHT3 1053 aa6.11□□□□□ -1.43
ERCC4-204ENST00000573018 KRTAP5-3Q6L8H2 238 aa6.11□□□□□ -1.43
ERCC4-204ENST00000573018 ARID3AQ99856 593 aa6.11□□□□□ -1.43
ERCC4-204ENST00000573018 ADAM7Q9H2U9 754 aa6.11□□□□□ -1.43
ERCC4-204ENST00000573018 TLR6Q9Y2C9 796 aa6.11□□□□□ -1.43
ERCC4-204ENST00000573018 RBM47A0AV96 593 aaKnown RBP6.1□□□□□ -1.43
ERCC4-204ENST00000573018 LDHBP07195 334 aaKnown RBP6.1□□□□□ -1.43
ERCC4-204ENST00000573018 RPL10P27635 214 aaKnown RBP6.1□□□□□ -1.43
ERCC4-204ENST00000573018 VIPR1P32241 457 aa6.1□□□□□ -1.43
ERCC4-204ENST00000573018 KREMEN1Q96MU8 473 aa6.1□□□□□ -1.43
ERCC4-204ENST00000573018 ASB16Q96NS5 453 aa6.1□□□□□ -1.43
ERCC4-204ENST00000573018 EPB41L4AQ9HCS5 686 aaPredicted RBP6.1□□□□□ -1.43
ERCC4-204ENST00000573018 ZMYM5Q9UJ78 669 aa6.1□□□□□ -1.43
ERCC4-204ENST00000573018 N4BP3O15049 544 aa6.09□□□□□ -1.43
ERCC4-204ENST00000573018 YARSP54577 528 aaKnown RBP6.09□□□□□ -1.43
ERCC4-204ENST00000573018 SLC14A2Q15849 920 aa6.09□□□□□ -1.43
ERCC4-204ENST00000573018 WAPLQ7Z5K2 1190 aa6.09□□□□□ -1.43
ERCC4-204ENST00000573018 CNTD2Q9H8S5 307 aa6.09□□□□□ -1.43
ERCC4-204ENST00000573018 ADRB1P08588 477 aa6.08□□□□□ -1.44
ERCC4-204ENST00000573018 GNA15P30679 374 aa6.08□□□□□ -1.44
ERCC4-204ENST00000573018 CEP128Q6ZU80 1094 aa6.08□□□□□ -1.44
ERCC4-204ENST00000573018 C14orf37Q86TY3 774 aa6.08□□□□□ -1.44
ERCC4-204ENST00000573018 KLHL3Q9UH77 587 aa6.08□□□□□ -1.44
ERCC4-204ENST00000573018 NRDCO43847 1150 aa6.07□□□□□ -1.44
ERCC4-204ENST00000573018 CDR1P51861 262 aa6.07□□□□□ -1.44
ERCC4-204ENST00000573018 PDE4CQ08493 712 aa6.07□□□□□ -1.44
ERCC4-204ENST00000573018 MEI1Q5TIA1 1274 aa6.07□□□□□ -1.44
ERCC4-204ENST00000573018 ERICH6BQ5W0A0 696 aa6.07□□□□□ -1.44
ERCC4-204ENST00000573018 CNKSR3Q6P9H4 555 aa6.07□□□□□ -1.44
ERCC4-204ENST00000573018 TMEFF1Q8IYR6 380 aa6.07□□□□□ -1.44
ERCC4-204ENST00000573018 FRMD6Q96NE9 622 aa6.07□□□□□ -1.44
ERCC4-204ENST00000573018 ASPNQ9BXN1 380 aa6.07□□□□□ -1.44
ERCC4-204ENST00000573018 FOXP3Q9BZS1 431 aa6.07□□□□□ -1.44
ERCC4-204ENST00000573018 RNF19AQ9NV58 838 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms