RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 C19orf81C9J6K1 198 aa9.26□□□□□ -0.93
SMG6-211ENST00000572369 RAD21O60216 631 aa9.26□□□□□ -0.93
SMG6-211ENST00000572369 ECM2O94769 699 aaPredicted RBP9.26□□□□□ -0.93
SMG6-211ENST00000572369 GJB1P08034 283 aa9.26□□□□□ -0.93
SMG6-211ENST00000572369 OSBPP22059 807 aa9.26□□□□□ -0.93
SMG6-211ENST00000572369 MAGEA10P43363 369 aaPredicted RBP9.26□□□□□ -0.93
SMG6-211ENST00000572369 BACE1P56817 501 aa9.26□□□□□ -0.93
SMG6-211ENST00000572369 JAG1P78504 1218 aa9.26□□□□□ -0.93
SMG6-211ENST00000572369 ATP2B2Q01814 1243 aa9.26□□□□□ -0.93
SMG6-211ENST00000572369 GABPAQ06546 454 aa9.26□□□□□ -0.93
SMG6-211ENST00000572369 PDE4BQ07343 736 aa9.26□□□□□ -0.93
SMG6-211ENST00000572369 SEPT2Q15019 361 aa9.26□□□□□ -0.93
SMG6-211ENST00000572369 TMEM179Q6ZVK1 233 aa9.26□□□□□ -0.93
SMG6-211ENST00000572369 C16orf86Q6ZW13 317 aa9.26□□□□□ -0.93
SMG6-211ENST00000572369 ZNF444Q8N0Y2 327 aaPredicted RBP9.26□□□□□ -0.93
SMG6-211ENST00000572369 PROCA1Q8NCQ7 364 aaPredicted RBP9.26□□□□□ -0.93
SMG6-211ENST00000572369 SMCR8Q8TEV9 937 aaPredicted RBP9.26□□□□□ -0.93
SMG6-211ENST00000572369 CCDC17Q96LX7 622 aa9.26□□□□□ -0.93
SMG6-211ENST00000572369 WDR18Q9BV38 432 aa9.26□□□□□ -0.93
SMG6-211ENST00000572369 UBE2OQ9C0C9 1292 aaKnown RBP9.26□□□□□ -0.93
SMG6-211ENST00000572369 ARHGEF10LQ9HCE6 1279 aa9.26□□□□□ -0.93
SMG6-211ENST00000572369 EPB41L4AQ9HCS5 686 aaPredicted RBP9.26□□□□□ -0.93
SMG6-211ENST00000572369 PNMA3Q9UL41 463 aa9.26□□□□□ -0.93
SMG6-211ENST00000572369 ZMYND8Q9ULU4 1186 aaPredicted RBP9.26□□□□□ -0.93
SMG6-211ENST00000572369 CCDC171Q6TFL3 1326 aa9.26□□□□□ -0.93
SMG6-211ENST00000572369 TLR2O60603 784 aa9.25□□□□□ -0.93
SMG6-211ENST00000572369 CYP2C8P10632 490 aa9.25□□□□□ -0.93
SMG6-211ENST00000572369 AKR1B1P15121 316 aa9.25□□□□□ -0.93
SMG6-211ENST00000572369 USP14P54578 494 aa9.25□□□□□ -0.93
SMG6-211ENST00000572369 IRX3P78415 501 aaPredicted RBP9.25□□□□□ -0.93
SMG6-211ENST00000572369 ICA1Q05084 483 aa9.25□□□□□ -0.93
SMG6-211ENST00000572369 PPARAQ07869 468 aa9.25□□□□□ -0.93
SMG6-211ENST00000572369 GPAT2Q6NUI2 795 aa9.25□□□□□ -0.93
SMG6-211ENST00000572369 USP17L2Q6R6M4 530 aa9.25□□□□□ -0.93
SMG6-211ENST00000572369 ADAMTS19Q8TE59 1207 aa9.25□□□□□ -0.93
SMG6-211ENST00000572369 RUFY2Q8WXA3 655 aa9.25□□□□□ -0.93
SMG6-211ENST00000572369 LRFN3Q9BTN0 628 aa9.25□□□□□ -0.93
SMG6-211ENST00000572369 SH2D4AQ9H788 454 aa9.25□□□□□ -0.93
SMG6-211ENST00000572369 TOMM22Q9NS69 142 aa9.25□□□□□ -0.93
SMG6-211ENST00000572369 AGTPBP1Q9UPW5 1226 aa9.25□□□□□ -0.93
SMG6-211ENST00000572369 ALPK3Q96L96 1907 aa9.25□□□□□ -0.93
SMG6-211ENST00000572369 SMIM22K7EJ46 135 aa9.24□□□□□ -0.93
SMG6-211ENST00000572369 PRDM1O75626 825 aa9.24□□□□□ -0.93
SMG6-211ENST00000572369 TSPY3P0CV98 308 aa9.24□□□□□ -0.93
SMG6-211ENST00000572369 TSPY8P0CW00 308 aa9.24□□□□□ -0.93
SMG6-211ENST00000572369 GSPT1P15170 499 aaKnown RBP9.24□□□□□ -0.93
SMG6-211ENST00000572369 CTDSPL2Q05D32 466 aa9.24□□□□□ -0.93
SMG6-211ENST00000572369 MOGSQ13724 837 aa9.24□□□□□ -0.93
SMG6-211ENST00000572369 SH3D19Q5HYK7 790 aa9.24□□□□□ -0.93
SMG6-211ENST00000572369 TREML2Q5T2D2 321 aa9.24□□□□□ -0.93
SMG6-211ENST00000572369 VPS53Q5VIR6 699 aa9.24□□□□□ -0.93
SMG6-211ENST00000572369 ZNF589Q86UQ0 364 aaPredicted RBP9.24□□□□□ -0.93
SMG6-211ENST00000572369 MYLIPQ8WY64 445 aa9.24□□□□□ -0.93
SMG6-211ENST00000572369 CPA4Q9UI42 421 aa9.24□□□□□ -0.93
SMG6-211ENST00000572369 SLC45A1Q9Y2W3 748 aa9.24□□□□□ -0.93
SMG6-211ENST00000572369 MYH4Q9Y623 1939 aa9.24□□□□□ -0.93
SMG6-211ENST00000572369 ROBO3Q96MS0 1386 aa9.24□□□□□ -0.93
SMG6-211ENST00000572369 HSPD1P10809 573 aaKnown RBP9.23□□□□□ -0.93
SMG6-211ENST00000572369 FOSL2P15408 326 aa9.23□□□□□ -0.93
SMG6-211ENST00000572369 RASA1P20936 1047 aa9.23□□□□□ -0.93
SMG6-211ENST00000572369 GUCY1A2P33402 732 aa9.23□□□□□ -0.93
SMG6-211ENST00000572369 CLEC10AQ8IUN9 316 aa9.23□□□□□ -0.93
SMG6-211ENST00000572369 C7orf61Q8IZ16 206 aa9.23□□□□□ -0.93
SMG6-211ENST00000572369 ACER1Q8TDN7 264 aa9.23□□□□□ -0.93
SMG6-211ENST00000572369 U2AF1L4Q8WU68 220 aaKnown RBP9.23□□□□□ -0.93
SMG6-211ENST00000572369 UHRF1Q96T88 793 aaPredicted RBP9.23□□□□□ -0.93
SMG6-211ENST00000572369 KIAA1683Q9H0B3 1180 aa9.23□□□□□ -0.93
SMG6-211ENST00000572369 ASCC2Q9H1I8 757 aaPredicted RBP9.23□□□□□ -0.93
SMG6-211ENST00000572369 KANSL2Q9H9L4 492 aa9.23□□□□□ -0.93
SMG6-211ENST00000572369 MGAMO43451 1857 aa9.23□□□□□ -0.93
SMG6-211ENST00000572369 TSPY2A6NKD2 308 aa9.22□□□□□ -0.93
SMG6-211ENST00000572369 RANBP6O60518 1105 aaKnown RBP9.22□□□□□ -0.93
SMG6-211ENST00000572369 FMNL1O95466 1100 aaPredicted RBP9.22□□□□□ -0.93
SMG6-211ENST00000572369 FGAP02671 866 aa9.22□□□□□ -0.93
SMG6-211ENST00000572369 CCL5P13501 91 aa9.22□□□□□ -0.93
SMG6-211ENST00000572369 EEF2P13639 858 aaKnown RBP9.22□□□□□ -0.93
SMG6-211ENST00000572369 HAND2P61296 217 aa9.22□□□□□ -0.93
SMG6-211ENST00000572369 FOXK2Q01167 660 aa9.22□□□□□ -0.93
SMG6-211ENST00000572369 ALX1Q15699 326 aa9.22□□□□□ -0.93
SMG6-211ENST00000572369 RRP12Q5JTH9 1297 aaKnown RBP9.22□□□□□ -0.93
SMG6-211ENST00000572369 ERICH6BQ5W0A0 696 aa9.22□□□□□ -0.93
SMG6-211ENST00000572369 SAMD1Q6SPF0 538 aaPredicted RBP9.22□□□□□ -0.93
SMG6-211ENST00000572369 CCAR1Q8IX12 1150 aaKnown RBP9.22□□□□□ -0.93
SMG6-211ENST00000572369 RNF208Q9H0X6 261 aa9.22□□□□□ -0.93
SMG6-211ENST00000572369 GOPCQ9HD26 462 aa9.22□□□□□ -0.93
SMG6-211ENST00000572369 EMILIN3Q9NT22 766 aa9.22□□□□□ -0.93
SMG6-211ENST00000572369 PPP4R2Q9NY27 417 aa9.22□□□□□ -0.93
SMG6-211ENST00000572369 LAMA4Q16363 1823 aa9.21□□□□□ -0.93
SMG6-211ENST00000572369 NCOR1O75376 2440 aa9.21□□□□□ -0.93
SMG6-211ENST00000572369 PKD1L2Q7Z442 2459 aa9.21□□□□□ -0.93
SMG6-211ENST00000572369 USP17L15C9J2P7 530 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 USP17L13C9JLJ4 530 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 USP17L11C9JVI0 530 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 USP17L18D6R9N7 530 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 USP17L22D6RA61 530 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 USP17L17D6RBQ6 530 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 USP17L19D6RCP7 530 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 USP17L20D6RJB6 530 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 ZNF213O14771 459 aa9.21□□□□□ -0.94
SMG6-211ENST00000572369 SYN1P17600 705 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms