RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 ARPP21Q9UBL0 812 aaPredicted RBP16.49■□□□□ 0.23
RAB40B-204ENST00000571554 RAD21O60216 631 aa16.48■□□□□ 0.23
RAB40B-204ENST00000571554 GLRX3O76003 335 aaKnown RBP16.48■□□□□ 0.23
RAB40B-204ENST00000571554 EEF2P13639 858 aaKnown RBP16.48■□□□□ 0.23
RAB40B-204ENST00000571554 TDO2P48775 406 aa16.48■□□□□ 0.23
RAB40B-204ENST00000571554 SOCS4Q8WXH5 440 aa16.48■□□□□ 0.23
RAB40B-204ENST00000571554 DPF3Q92784 378 aa16.48■□□□□ 0.23
RAB40B-204ENST00000571554 CCDC17Q96LX7 622 aa16.48■□□□□ 0.23
RAB40B-204ENST00000571554 PAK6Q9NQU5 681 aaPredicted RBP16.48■□□□□ 0.23
RAB40B-204ENST00000571554 ZBTB47Q9UFB7 747 aaPredicted RBP16.48■□□□□ 0.23
RAB40B-204ENST00000571554 RLFQ13129 1914 aa16.48■□□□□ 0.23
RAB40B-204ENST00000571554 ZFYP08048 801 aaPredicted RBP16.47■□□□□ 0.23
RAB40B-204ENST00000571554 PRKAR2AP13861 404 aaKnown RBP16.47■□□□□ 0.23
RAB40B-204ENST00000571554 MORN1Q5T089 497 aa16.47■□□□□ 0.23
RAB40B-204ENST00000571554 UBE2Q1Q7Z7E8 422 aa16.47■□□□□ 0.23
RAB40B-204ENST00000571554 VCPKMTQ9H867 229 aa16.47■□□□□ 0.23
RAB40B-204ENST00000571554 TMX2Q9Y320 296 aa16.47■□□□□ 0.23
RAB40B-204ENST00000571554 A0A0G2JMZ2 1700 aa16.47■□□□□ 0.23
RAB40B-204ENST00000571554 SALL3Q9BXA9 1300 aa16.46■□□□□ 0.23
RAB40B-204ENST00000571554 PRDM1O75626 825 aa16.46■□□□□ 0.23
RAB40B-204ENST00000571554 FLOT1O75955 427 aa16.46■□□□□ 0.23
RAB40B-204ENST00000571554 ZKSCAN1P17029 563 aaPredicted RBP16.46■□□□□ 0.23
RAB40B-204ENST00000571554 RASA1P20936 1047 aa16.46■□□□□ 0.23
RAB40B-204ENST00000571554 CCNA1P78396 465 aa16.46■□□□□ 0.23
RAB40B-204ENST00000571554 COG2Q14746 738 aa16.46■□□□□ 0.23
RAB40B-204ENST00000571554 SBK1Q52WX2 424 aa16.46■□□□□ 0.23
RAB40B-204ENST00000571554 CCDC129Q6ZRS4 1044 aa16.46■□□□□ 0.23
RAB40B-204ENST00000571554 DIS3LQ8TF46 1054 aaKnown RBP16.46■□□□□ 0.23
RAB40B-204ENST00000571554 USP6NLQ92738 828 aa16.46■□□□□ 0.23
RAB40B-204ENST00000571554 ATG4CQ96DT6 458 aa16.46■□□□□ 0.23
RAB40B-204ENST00000571554 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.46■□□□□ 0.23
RAB40B-204ENST00000571554 MKNK2Q9HBH9 465 aa16.46■□□□□ 0.23
RAB40B-204ENST00000571554 HMX1Q9NP08 348 aaPredicted RBP16.46■□□□□ 0.23
RAB40B-204ENST00000571554 PARP14Q460N5 1801 aa16.46■□□□□ 0.23
RAB40B-204ENST00000571554 GREB1LQ9C091 1923 aaPredicted RBP16.46■□□□□ 0.23
RAB40B-204ENST00000571554 RPTORQ8N122 1335 aa16.45■□□□□ 0.22
RAB40B-204ENST00000571554 COL11A1P12107 1806 aaPredicted RBP16.45■□□□□ 0.22
RAB40B-204ENST00000571554 H0YGN5 161 aa16.45■□□□□ 0.22
RAB40B-204ENST00000571554 RGS2P41220 211 aa16.45■□□□□ 0.22
RAB40B-204ENST00000571554 PLS1Q14651 629 aa16.45■□□□□ 0.22
RAB40B-204ENST00000571554 B4GALNT3Q6L9W6 998 aa16.45■□□□□ 0.22
RAB40B-204ENST00000571554 LBX2Q6XYB7 198 aa16.45■□□□□ 0.22
RAB40B-204ENST00000571554 APBA2Q99767 749 aa16.45■□□□□ 0.22
RAB40B-204ENST00000571554 MOV10L1Q9BXT6 1211 aaKnown RBP16.45■□□□□ 0.22
RAB40B-204ENST00000571554 SH2D4AQ9H788 454 aa16.45■□□□□ 0.22
RAB40B-204ENST00000571554 FBXO28Q9NVF7 368 aa16.45■□□□□ 0.22
RAB40B-204ENST00000571554 ROBO3Q96MS0 1386 aa16.44■□□□□ 0.22
RAB40B-204ENST00000571554 PATL2C9JE40 543 aaKnown RBP16.44■□□□□ 0.22
RAB40B-204ENST00000571554 SLC34A2O95436 690 aa16.44■□□□□ 0.22
RAB40B-204ENST00000571554 XRCC5P13010 732 aaKnown RBP16.44■□□□□ 0.22
RAB40B-204ENST00000571554 GNAT2P19087 354 aa16.44■□□□□ 0.22
RAB40B-204ENST00000571554 PTPREP23469 700 aa16.44■□□□□ 0.22
RAB40B-204ENST00000571554 CACNB2Q08289 660 aaPredicted RBP16.44■□□□□ 0.22
RAB40B-204ENST00000571554 MAP2K5Q13163 448 aa16.44■□□□□ 0.22
RAB40B-204ENST00000571554 HDAC1Q13547 482 aaPredicted RBP16.44■□□□□ 0.22
RAB40B-204ENST00000571554 LRRFIP1Q32MZ4 808 aaKnown RBP16.44■□□□□ 0.22
RAB40B-204ENST00000571554 ZMYM1Q5SVZ6 1142 aa16.44■□□□□ 0.22
RAB40B-204ENST00000571554 GIMAP6Q6P9H5 292 aa16.44■□□□□ 0.22
RAB40B-204ENST00000571554 IFNL3Q8IZI9 196 aa16.44■□□□□ 0.22
RAB40B-204ENST00000571554 EXOC6Q8TAG9 804 aa16.44■□□□□ 0.22
RAB40B-204ENST00000571554 LPAR1Q92633 364 aa16.44■□□□□ 0.22
RAB40B-204ENST00000571554 GCC1Q96CN9 775 aa16.44■□□□□ 0.22
RAB40B-204ENST00000571554 PAWRQ96IZ0 340 aaKnown RBP16.44■□□□□ 0.22
RAB40B-204ENST00000571554 LNPKQ9C0E8 428 aa16.44■□□□□ 0.22
RAB40B-204ENST00000571554 CRISPLD2Q9H0B8 497 aa16.44■□□□□ 0.22
RAB40B-204ENST00000571554 KANSL2Q9H9L4 492 aa16.44■□□□□ 0.22
RAB40B-204ENST00000571554 FLRT1Q9NZU1 646 aa16.44■□□□□ 0.22
RAB40B-204ENST00000571554 IVNS1ABPQ9Y6Y0 642 aa16.44■□□□□ 0.22
RAB40B-204ENST00000571554 CEP290O15078 2479 aa16.43■□□□□ 0.22
RAB40B-204ENST00000571554 WDR46O15213 610 aaKnown RBP16.43■□□□□ 0.22
RAB40B-204ENST00000571554 CCND3P30281 292 aaPredicted RBP16.43■□□□□ 0.22
RAB40B-204ENST00000571554 DSG3P32926 999 aa16.43■□□□□ 0.22
RAB40B-204ENST00000571554 FAM83BQ5T0W9 1011 aa16.43■□□□□ 0.22
RAB40B-204ENST00000571554 MAP3K21Q5TCX8 1036 aa16.43■□□□□ 0.22
RAB40B-204ENST00000571554 NPLOC4Q8TAT6 608 aa16.43■□□□□ 0.22
RAB40B-204ENST00000571554 NUP88Q99567 741 aaPredicted RBP16.43■□□□□ 0.22
RAB40B-204ENST00000571554 SPATC1LQ9H0A9 340 aa16.43■□□□□ 0.22
RAB40B-204ENST00000571554 HOXC10Q9NYD6 342 aa16.43■□□□□ 0.22
RAB40B-204ENST00000571554 MYH4Q9Y623 1939 aa16.43■□□□□ 0.22
RAB40B-204ENST00000571554 SLC15A5A6NIM6 579 aa16.42■□□□□ 0.22
RAB40B-204ENST00000571554 ERCC3P19447 782 aa16.42■□□□□ 0.22
RAB40B-204ENST00000571554 PDE1AP54750 535 aa16.42■□□□□ 0.22
RAB40B-204ENST00000571554 GRB14Q14449 540 aa16.42■□□□□ 0.22
RAB40B-204ENST00000571554 HTATIP2Q9BUP3 242 aa16.42■□□□□ 0.22
RAB40B-204ENST00000571554 NAPBQ9H115 298 aa16.42■□□□□ 0.22
RAB40B-204ENST00000571554 GOPCQ9HD26 462 aa16.42■□□□□ 0.22
RAB40B-204ENST00000571554 ALPK3Q96L96 1907 aa16.42■□□□□ 0.22
RAB40B-204ENST00000571554 HABP4Q5JVS0 413 aaKnown RBP16.41■□□□□ 0.22
RAB40B-204ENST00000571554 NCAPG2Q86XI2 1143 aa16.41■□□□□ 0.22
RAB40B-204ENST00000571554 CHMP4CQ96CF2 233 aa16.41■□□□□ 0.22
RAB40B-204ENST00000571554 NACAP1Q9BZK3 213 aa16.41■□□□□ 0.22
RAB40B-204ENST00000571554 COLQQ9Y215 455 aaPredicted RBP16.41■□□□□ 0.22
RAB40B-204ENST00000571554 FOXP2O15409 715 aa16.4■□□□□ 0.22
RAB40B-204ENST00000571554 IGHDP01880 384 aa16.4■□□□□ 0.22
RAB40B-204ENST00000571554 ADORA2AP29274 412 aa16.4■□□□□ 0.22
RAB40B-204ENST00000571554 CYP2C19P33261 490 aa16.4■□□□□ 0.22
RAB40B-204ENST00000571554 TMEM132BQ14DG7 1078 aa16.4■□□□□ 0.22
RAB40B-204ENST00000571554 FAM47AQ5JRC9 791 aa16.4■□□□□ 0.22
RAB40B-204ENST00000571554 VPS53Q5VIR6 699 aa16.4■□□□□ 0.22
RAB40B-204ENST00000571554 DPP9Q86TI2 863 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms