RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 PLEKHH3Q7Z736 793 aa16.35■□□□□ 0.21
PRPF8-202ENST00000571346 CCDC17Q96LX7 622 aa16.35■□□□□ 0.21
PRPF8-202ENST00000571346 PAK6Q9NQU5 681 aaPredicted RBP16.35■□□□□ 0.21
PRPF8-202ENST00000571346 MINDY4BA8MYZ0 360 aa16.34■□□□□ 0.21
PRPF8-202ENST00000571346 SGPL1O95470 568 aa16.34■□□□□ 0.21
PRPF8-202ENST00000571346 TFRCP02786 760 aaKnown RBP16.34■□□□□ 0.21
PRPF8-202ENST00000571346 RGS2P41220 211 aa16.34■□□□□ 0.21
PRPF8-202ENST00000571346 ANKRD45Q5TZF3 282 aa16.34■□□□□ 0.21
PRPF8-202ENST00000571346 LPAR1Q92633 364 aa16.34■□□□□ 0.21
PRPF8-202ENST00000571346 APBA2Q99767 749 aa16.34■□□□□ 0.21
PRPF8-202ENST00000571346 EPB41L4AQ9HCS5 686 aaPredicted RBP16.34■□□□□ 0.21
PRPF8-202ENST00000571346 GSG1L2A8MUP6 293 aa16.33■□□□□ 0.2
PRPF8-202ENST00000571346 FLOT1O75955 427 aa16.33■□□□□ 0.2
PRPF8-202ENST00000571346 PRKAR2AP13861 404 aaKnown RBP16.33■□□□□ 0.2
PRPF8-202ENST00000571346 GNAT2P19087 354 aa16.33■□□□□ 0.2
PRPF8-202ENST00000571346 KIAA1755Q5JYT7 1200 aa16.33■□□□□ 0.2
PRPF8-202ENST00000571346 DPF3Q92784 378 aa16.33■□□□□ 0.2
PRPF8-202ENST00000571346 VCPKMTQ9H867 229 aa16.33■□□□□ 0.2
PRPF8-202ENST00000571346 BTBD7Q9P203 1132 aa16.33■□□□□ 0.2
PRPF8-202ENST00000571346 IVNS1ABPQ9Y6Y0 642 aa16.33■□□□□ 0.2
PRPF8-202ENST00000571346 ROBO3Q96MS0 1386 aa16.33■□□□□ 0.2
PRPF8-202ENST00000571346 GREB1LQ9C091 1923 aaPredicted RBP16.33■□□□□ 0.2
PRPF8-202ENST00000571346 EEF2P13639 858 aaKnown RBP16.32■□□□□ 0.2
PRPF8-202ENST00000571346 PARP14Q460N5 1801 aa16.32■□□□□ 0.2
PRPF8-202ENST00000571346 GIMAP6Q6P9H5 292 aa16.32■□□□□ 0.2
PRPF8-202ENST00000571346 LBX2Q6XYB7 198 aa16.32■□□□□ 0.2
PRPF8-202ENST00000571346 GCC1Q96CN9 775 aa16.32■□□□□ 0.2
PRPF8-202ENST00000571346 SEC62Q99442 399 aaKnown RBP16.32■□□□□ 0.2
PRPF8-202ENST00000571346 HTATIP2Q9BUP3 242 aa16.32■□□□□ 0.2
PRPF8-202ENST00000571346 MKNK2Q9HBH9 465 aa16.32■□□□□ 0.2
PRPF8-202ENST00000571346 HMX1Q9NP08 348 aaPredicted RBP16.32■□□□□ 0.2
PRPF8-202ENST00000571346 TMX2Q9Y320 296 aa16.32■□□□□ 0.2
PRPF8-202ENST00000571346 CEP290O15078 2479 aa16.31■□□□□ 0.2
PRPF8-202ENST00000571346 RLFQ13129 1914 aa16.31■□□□□ 0.2
PRPF8-202ENST00000571346 RPTORQ8N122 1335 aa16.31■□□□□ 0.2
PRPF8-202ENST00000571346 WDR46O15213 610 aaKnown RBP16.31■□□□□ 0.2
PRPF8-202ENST00000571346 XRCC5P13010 732 aaKnown RBP16.31■□□□□ 0.2
PRPF8-202ENST00000571346 HDAC1Q13547 482 aaPredicted RBP16.31■□□□□ 0.2
PRPF8-202ENST00000571346 PLS1Q14651 629 aa16.31■□□□□ 0.2
PRPF8-202ENST00000571346 COG2Q14746 738 aa16.31■□□□□ 0.2
PRPF8-202ENST00000571346 CCL14Q16627 93 aa16.31■□□□□ 0.2
PRPF8-202ENST00000571346 SBK1Q52WX2 424 aa16.31■□□□□ 0.2
PRPF8-202ENST00000571346 MORN1Q5T089 497 aa16.31■□□□□ 0.2
PRPF8-202ENST00000571346 TRMT44Q8IYL2 757 aaKnown RBP16.31■□□□□ 0.2
PRPF8-202ENST00000571346 NACAP1Q9BZK3 213 aa16.31■□□□□ 0.2
PRPF8-202ENST00000571346 KANSL2Q9H9L4 492 aa16.31■□□□□ 0.2
PRPF8-202ENST00000571346 GOPCQ9HD26 462 aa16.31■□□□□ 0.2
PRPF8-202ENST00000571346 SALL3Q9BXA9 1300 aa16.3■□□□□ 0.2
PRPF8-202ENST00000571346 PRDM1O75626 825 aa16.3■□□□□ 0.2
PRPF8-202ENST00000571346 SLC34A2O95436 690 aa16.3■□□□□ 0.2
PRPF8-202ENST00000571346 MAP2K5Q13163 448 aa16.3■□□□□ 0.2
PRPF8-202ENST00000571346 UBE2Q1Q7Z7E8 422 aa16.3■□□□□ 0.2
PRPF8-202ENST00000571346 SIAH1Q8IUQ4 282 aa16.3■□□□□ 0.2
PRPF8-202ENST00000571346 ATG4CQ96DT6 458 aa16.3■□□□□ 0.2
PRPF8-202ENST00000571346 NAPBQ9H115 298 aa16.3■□□□□ 0.2
PRPF8-202ENST00000571346 HOXC10Q9NYD6 342 aa16.3■□□□□ 0.2
PRPF8-202ENST00000571346 ZNF236Q9UL36 1845 aa16.3■□□□□ 0.2
PRPF8-202ENST00000571346 COL11A1P12107 1806 aaPredicted RBP16.29■□□□□ 0.2
PRPF8-202ENST00000571346 H0YGN5 161 aa16.29■□□□□ 0.2
PRPF8-202ENST00000571346 RASA1P20936 1047 aa16.29■□□□□ 0.2
PRPF8-202ENST00000571346 GRB14Q14449 540 aa16.29■□□□□ 0.2
PRPF8-202ENST00000571346 DIS3LQ8TF46 1054 aaKnown RBP16.29■□□□□ 0.2
PRPF8-202ENST00000571346 USP6NLQ92738 828 aa16.29■□□□□ 0.2
PRPF8-202ENST00000571346 MOV10L1Q9BXT6 1211 aaKnown RBP16.29■□□□□ 0.2
PRPF8-202ENST00000571346 SPATC1LQ9H0A9 340 aa16.29■□□□□ 0.2
PRPF8-202ENST00000571346 CRISPLD2Q9H0B8 497 aa16.29■□□□□ 0.2
PRPF8-202ENST00000571346 MYH4Q9Y623 1939 aa16.29■□□□□ 0.2
PRPF8-202ENST00000571346 FRMPD3Q5JV73 1810 aa16.29■□□□□ 0.2
PRPF8-202ENST00000571346 RANBP2P49792 3224 aaKnown RBP16.28■□□□□ 0.2
PRPF8-202ENST00000571346 SLC15A5A6NIM6 579 aa16.28■□□□□ 0.2
PRPF8-202ENST00000571346 PTPREP23469 700 aa16.28■□□□□ 0.2
PRPF8-202ENST00000571346 DSG3P32926 999 aa16.28■□□□□ 0.2
PRPF8-202ENST00000571346 CACNB2Q08289 660 aaPredicted RBP16.28■□□□□ 0.2
PRPF8-202ENST00000571346 ZMYM1Q5SVZ6 1142 aa16.28■□□□□ 0.2
PRPF8-202ENST00000571346 FAM83BQ5T0W9 1011 aa16.28■□□□□ 0.2
PRPF8-202ENST00000571346 MAP3K21Q5TCX8 1036 aa16.28■□□□□ 0.2
PRPF8-202ENST00000571346 CCDC129Q6ZRS4 1044 aa16.28■□□□□ 0.2
PRPF8-202ENST00000571346 IFNL3Q8IZI9 196 aa16.28■□□□□ 0.2
PRPF8-202ENST00000571346 MB21D1Q8N884 522 aa16.28■□□□□ 0.2
PRPF8-202ENST00000571346 PAWRQ96IZ0 340 aaKnown RBP16.28■□□□□ 0.2
PRPF8-202ENST00000571346 LNPKQ9C0E8 428 aa16.28■□□□□ 0.2
PRPF8-202ENST00000571346 ZNF287Q9HBT7 754 aa16.28■□□□□ 0.2
PRPF8-202ENST00000571346 FBXO28Q9NVF7 368 aa16.28■□□□□ 0.2
PRPF8-202ENST00000571346 PATL2C9JE40 543 aaKnown RBP16.27■□□□□ 0.2
PRPF8-202ENST00000571346 ERCC3P19447 782 aa16.27■□□□□ 0.2
PRPF8-202ENST00000571346 MFSD14CQ5VZR4 134 aa16.27■□□□□ 0.2
PRPF8-202ENST00000571346 B4GALNT3Q6L9W6 998 aa16.27■□□□□ 0.2
PRPF8-202ENST00000571346 NCAPG2Q86XI2 1143 aa16.27■□□□□ 0.2
PRPF8-202ENST00000571346 NUP88Q99567 741 aaPredicted RBP16.27■□□□□ 0.2
PRPF8-202ENST00000571346 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.27■□□□□ 0.2
PRPF8-202ENST00000571346 SLC3A2P08195 630 aaKnown RBP16.26■□□□□ 0.19
PRPF8-202ENST00000571346 ADORA2AP29274 412 aa16.26■□□□□ 0.19
PRPF8-202ENST00000571346 CCND3P30281 292 aaPredicted RBP16.26■□□□□ 0.19
PRPF8-202ENST00000571346 PDE1AP54750 535 aa16.26■□□□□ 0.19
PRPF8-202ENST00000571346 PDE4BQ07343 736 aa16.26■□□□□ 0.19
PRPF8-202ENST00000571346 NECAB2Q7Z6G3 386 aa16.26■□□□□ 0.19
PRPF8-202ENST00000571346 DPP9Q86TI2 863 aa16.26■□□□□ 0.19
PRPF8-202ENST00000571346 ZNF444Q8N0Y2 327 aaPredicted RBP16.26■□□□□ 0.19
PRPF8-202ENST00000571346 EVI5LQ96CN4 794 aa16.26■□□□□ 0.19
PRPF8-202ENST00000571346 FLRT1Q9NZU1 646 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms