RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 WRNIP1Q96S55 665 aa13.88□□□□□ -0.19
CDRT1-206ENST00000571263 GOPCQ9HD26 462 aa13.88□□□□□ -0.19
CDRT1-206ENST00000571263 TMX2Q9Y320 296 aa13.88□□□□□ -0.19
CDRT1-206ENST00000571263 CSADQ9Y600 493 aa13.88□□□□□ -0.19
CDRT1-206ENST00000571263 PALM3A6NDB9 673 aaPredicted RBP13.87□□□□□ -0.19
CDRT1-206ENST00000571263 SNHG28P0DPA3 235 aa13.87□□□□□ -0.19
CDRT1-206ENST00000571263 USP14P54578 494 aa13.87□□□□□ -0.19
CDRT1-206ENST00000571263 ATP2B2Q01814 1243 aa13.87□□□□□ -0.19
CDRT1-206ENST00000571263 SSRP1Q08945 709 aaKnown RBP13.87□□□□□ -0.19
CDRT1-206ENST00000571263 ANKRD13AQ8IZ07 590 aa13.87□□□□□ -0.19
CDRT1-206ENST00000571263 NSUN7Q8NE18 718 aaKnown RBP13.87□□□□□ -0.19
CDRT1-206ENST00000571263 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.87□□□□□ -0.19
CDRT1-206ENST00000571263 WDR18Q9BV38 432 aa13.87□□□□□ -0.19
CDRT1-206ENST00000571263 RNF26Q9BY78 433 aaPredicted RBP13.87□□□□□ -0.19
CDRT1-206ENST00000571263 SCAF8Q9UPN6 1271 aaKnown RBP13.87□□□□□ -0.19
CDRT1-206ENST00000571263 STK36Q9NRP7 1315 aa13.87□□□□□ -0.19
CDRT1-206ENST00000571263 C19orf81C9J6K1 198 aa13.86□□□□□ -0.19
CDRT1-206ENST00000571263 ADD1P35611 737 aaKnown RBP13.86□□□□□ -0.19
CDRT1-206ENST00000571263 RRP1BQ14684 758 aaKnown RBP13.86□□□□□ -0.19
CDRT1-206ENST00000571263 PRAMEF18Q5VWM3 479 aa13.86□□□□□ -0.19
CDRT1-206ENST00000571263 SLFN13Q68D06 897 aa13.86□□□□□ -0.19
CDRT1-206ENST00000571263 CHADLQ6NUI6 762 aa13.86□□□□□ -0.19
CDRT1-206ENST00000571263 FAM177A1Q8N128 213 aaPredicted RBP13.86□□□□□ -0.19
CDRT1-206ENST00000571263 LPAR1Q92633 364 aa13.86□□□□□ -0.19
CDRT1-206ENST00000571263 GMCL1Q96IK5 515 aa13.86□□□□□ -0.19
CDRT1-206ENST00000571263 GLIS2Q9BZE0 524 aaPredicted RBP13.86□□□□□ -0.19
CDRT1-206ENST00000571263 GPBP1L1Q9HC44 474 aaPredicted RBP13.86□□□□□ -0.19
CDRT1-206ENST00000571263 FAM217BQ9NTX9 383 aaPredicted RBP13.86□□□□□ -0.19
CDRT1-206ENST00000571263 CHMP5Q9NZZ3 219 aa13.86□□□□□ -0.19
CDRT1-206ENST00000571263 PTPDC1A2A3K4 754 aa13.85□□□□□ -0.19
CDRT1-206ENST00000571263 USP17L10C9JJH3 530 aa13.85□□□□□ -0.19
CDRT1-206ENST00000571263 F5H6K3 240 aa13.85□□□□□ -0.19
CDRT1-206ENST00000571263 PRPF3O43395 683 aaKnown RBP13.85□□□□□ -0.19
CDRT1-206ENST00000571263 DEXIO95424 95 aa13.85□□□□□ -0.19
CDRT1-206ENST00000571263 FMNL1O95466 1100 aaPredicted RBP13.85□□□□□ -0.19
CDRT1-206ENST00000571263 SLURP2P0DP57 97 aa13.85□□□□□ -0.19
CDRT1-206ENST00000571263 PDHBP11177 359 aa13.85□□□□□ -0.19
CDRT1-206ENST00000571263 XBP1P17861 261 aa13.85□□□□□ -0.19
CDRT1-206ENST00000571263 GJB2P29033 226 aa13.85□□□□□ -0.19
CDRT1-206ENST00000571263 CDC27P30260 824 aa13.85□□□□□ -0.19
CDRT1-206ENST00000571263 INPP5BP32019 993 aa13.85□□□□□ -0.19
CDRT1-206ENST00000571263 KLRC3Q07444 240 aa13.85□□□□□ -0.19
CDRT1-206ENST00000571263 TTLL12Q14166 644 aaPredicted RBP13.85□□□□□ -0.19
CDRT1-206ENST00000571263 NTRK3Q16288 839 aa13.85□□□□□ -0.19
CDRT1-206ENST00000571263 MAP1SQ66K74 1059 aaPredicted RBP13.85□□□□□ -0.19
CDRT1-206ENST00000571263 TMTC3Q6ZXV5 915 aa13.85□□□□□ -0.19
CDRT1-206ENST00000571263 SIAH1Q8IUQ4 282 aa13.85□□□□□ -0.19
CDRT1-206ENST00000571263 SPRYD3Q8NCJ5 442 aa13.85□□□□□ -0.19
CDRT1-206ENST00000571263 RBM46Q8TBY0 533 aaKnown RBP13.85□□□□□ -0.19
CDRT1-206ENST00000571263 MYL10Q9BUA6 226 aa13.85□□□□□ -0.19
CDRT1-206ENST00000571263 VCPKMTQ9H867 229 aa13.85□□□□□ -0.19
CDRT1-206ENST00000571263 NCOA5Q9HCD5 579 aaKnown RBP13.85□□□□□ -0.19
CDRT1-206ENST00000571263 NMRK2Q9NPI5 230 aa13.85□□□□□ -0.19
CDRT1-206ENST00000571263 CTDNEP1O95476 244 aa13.84□□□□□ -0.19
CDRT1-206ENST00000571263 PTPRAP18433 802 aa13.84□□□□□ -0.19
CDRT1-206ENST00000571263 RXRAP19793 462 aa13.84□□□□□ -0.19
CDRT1-206ENST00000571263 DDIT3P35638 169 aa13.84□□□□□ -0.19
CDRT1-206ENST00000571263 SLC1A4P43007 532 aa13.84□□□□□ -0.19
CDRT1-206ENST00000571263 JAG1P78504 1218 aa13.84□□□□□ -0.19
CDRT1-206ENST00000571263 ST3GAL1Q11201 340 aa13.84□□□□□ -0.19
CDRT1-206ENST00000571263 TRAF1Q13077 416 aa13.84□□□□□ -0.19
CDRT1-206ENST00000571263 LARP1BQ659C4 914 aaKnown RBP13.84□□□□□ -0.19
CDRT1-206ENST00000571263 CCDC144CPQ8IYA2 1237 aa13.84□□□□□ -0.19
CDRT1-206ENST00000571263 LRRC47Q8N1G4 583 aaKnown RBP13.84□□□□□ -0.19
CDRT1-206ENST00000571263 C2orf69Q8N8R5 385 aa13.84□□□□□ -0.19
CDRT1-206ENST00000571263 ZNF280CQ8ND82 737 aa13.84□□□□□ -0.19
CDRT1-206ENST00000571263 SPZ1Q9BXG8 430 aa13.84□□□□□ -0.19
CDRT1-206ENST00000571263 KIAA1683Q9H0B3 1180 aa13.84□□□□□ -0.19
CDRT1-206ENST00000571263 FOXD4L1Q9NU39 408 aa13.84□□□□□ -0.19
CDRT1-206ENST00000571263 ORC3Q9UBD5 711 aaPredicted RBP13.84□□□□□ -0.19
CDRT1-206ENST00000571263 MAD2L2Q9UI95 211 aa13.84□□□□□ -0.19
CDRT1-206ENST00000571263 SSC5DA1L4H1 1573 aa13.83□□□□□ -0.19
CDRT1-206ENST00000571263 POLR2AP24928 1970 aaKnown RBP13.83□□□□□ -0.19
CDRT1-206ENST00000571263 KLRF2D3W0D1 207 aa13.83□□□□□ -0.2
CDRT1-206ENST00000571263 PLA2G6O60733 806 aa13.83□□□□□ -0.2
CDRT1-206ENST00000571263 BMP3P12645 472 aa13.83□□□□□ -0.2
CDRT1-206ENST00000571263 PPATQ06203 517 aa13.83□□□□□ -0.2
CDRT1-206ENST00000571263 ZNF543Q08ER8 600 aa13.83□□□□□ -0.2
CDRT1-206ENST00000571263 USP17L2Q6R6M4 530 aa13.83□□□□□ -0.2
CDRT1-206ENST00000571263 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.83□□□□□ -0.2
CDRT1-206ENST00000571263 ERO1BQ86YB8 467 aa13.83□□□□□ -0.2
CDRT1-206ENST00000571263 ZNF526Q8TF50 670 aaPredicted RBP13.83□□□□□ -0.2
CDRT1-206ENST00000571263 CHURC1Q8WUH1 139 aa13.83□□□□□ -0.2
CDRT1-206ENST00000571263 ZKSCAN4Q969J2 545 aaPredicted RBP13.83□□□□□ -0.2
CDRT1-206ENST00000571263 FEZ1Q99689 392 aa13.83□□□□□ -0.2
CDRT1-206ENST00000571263 A0A1W2PRG0 241 aa13.82□□□□□ -0.2
CDRT1-206ENST00000571263 hCG_1984214I3L0E3 225 aa13.82□□□□□ -0.2
CDRT1-206ENST00000571263 BACE1P56817 501 aa13.82□□□□□ -0.2
CDRT1-206ENST00000571263 TRIM29Q14134 588 aa13.82□□□□□ -0.2
CDRT1-206ENST00000571263 LDLRAD1Q5T700 205 aa13.82□□□□□ -0.2
CDRT1-206ENST00000571263 NBPF11Q86T75 865 aa13.82□□□□□ -0.2
CDRT1-206ENST00000571263 FAM160B2Q86V87 743 aa13.82□□□□□ -0.2
CDRT1-206ENST00000571263 RAB11FIP4Q86YS3 637 aa13.82□□□□□ -0.2
CDRT1-206ENST00000571263 ZNF713Q8N859 430 aaPredicted RBP13.82□□□□□ -0.2
CDRT1-206ENST00000571263 SLC26A6Q9BXS9 759 aa13.82□□□□□ -0.2
CDRT1-206ENST00000571263 RIOX1Q9H6W3 641 aa13.82□□□□□ -0.2
CDRT1-206ENST00000571263 ZHX2Q9Y6X8 837 aa13.82□□□□□ -0.2
CDRT1-206ENST00000571263 WDR33Q9C0J8 1336 aaKnown RBP13.82□□□□□ -0.2
CDRT1-206ENST00000571263 DOCK1Q14185 1865 aa13.82□□□□□ -0.2
CDRT1-206ENST00000571263 CXCL11O14625 94 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms