RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 CCL14Q16627 93 aa25.7■■□□□ 1.7
UBFD1-210ENST00000571064 MCMDC2Q4G0Z9 681 aa25.7■■□□□ 1.7
UBFD1-210ENST00000571064 ZNF589Q86UQ0 364 aaPredicted RBP25.7■■□□□ 1.7
UBFD1-210ENST00000571064 GPRC5AQ8NFJ5 357 aa25.7■■□□□ 1.7
UBFD1-210ENST00000571064 COL2A1P02458 1487 aaPredicted RBP25.69■■□□□ 1.7
UBFD1-210ENST00000571064 HERVK_113P62684 666 aa25.69■■□□□ 1.7
UBFD1-210ENST00000571064 SLC4A4Q9Y6R1 1079 aa25.69■■□□□ 1.7
UBFD1-210ENST00000571064 NAV1Q8NEY1 1877 aa25.68■■□□□ 1.7
UBFD1-210ENST00000571064 FOXP2O15409 715 aa25.68■■□□□ 1.7
UBFD1-210ENST00000571064 HOXA7P31268 230 aaPredicted RBP25.68■■□□□ 1.7
UBFD1-210ENST00000571064 USP5P45974 858 aa25.68■■□□□ 1.7
UBFD1-210ENST00000571064 BACE1P56817 501 aa25.68■■□□□ 1.7
UBFD1-210ENST00000571064 JAG1P78504 1218 aa25.68■■□□□ 1.7
UBFD1-210ENST00000571064 Q3C1V9 767 aa25.68■■□□□ 1.7
UBFD1-210ENST00000571064 FAM109BQ6ICB4 259 aaPredicted RBP25.68■■□□□ 1.7
UBFD1-210ENST00000571064 USP6NLQ92738 828 aa25.68■■□□□ 1.7
UBFD1-210ENST00000571064 WDR18Q9BV38 432 aa25.68■■□□□ 1.7
UBFD1-210ENST00000571064 PORCNQ9H237 461 aa25.68■■□□□ 1.7
UBFD1-210ENST00000571064 TMOD4Q9NZQ9 345 aa25.68■■□□□ 1.7
UBFD1-210ENST00000571064 RBPJLQ9UBG7 517 aa25.68■■□□□ 1.7
UBFD1-210ENST00000571064 MYH1P12882 1939 aa25.68■■□□□ 1.7
UBFD1-210ENST00000571064 GSG1L2A8MUP6 293 aa25.67■■□□□ 1.7
UBFD1-210ENST00000571064 VPS53Q5VIR6 699 aa25.67■■□□□ 1.7
UBFD1-210ENST00000571064 TRMT44Q8IYL2 757 aaKnown RBP25.67■■□□□ 1.7
UBFD1-210ENST00000571064 DCP1AQ9NPI6 582 aaPredicted RBP25.67■■□□□ 1.7
UBFD1-210ENST00000571064 SAP30BPQ9UHR5 308 aaKnown RBP25.67■■□□□ 1.7
UBFD1-210ENST00000571064 HERC5Q9UII4 1024 aaKnown RBP25.67■■□□□ 1.7
UBFD1-210ENST00000571064 BAZ2AQ9UIF9 1905 aaKnown RBP25.67■■□□□ 1.7
UBFD1-210ENST00000571064 SIPA1L1O43166 1804 aa25.66■■□□□ 1.7
UBFD1-210ENST00000571064 MAPK4P31152 587 aa25.66■■□□□ 1.7
UBFD1-210ENST00000571064 RGS2P41220 211 aa25.65■■□□□ 1.7
UBFD1-210ENST00000571064 EVX2Q03828 476 aa25.65■■□□□ 1.7
UBFD1-210ENST00000571064 SHROOM1Q2M3G4 852 aaPredicted RBP25.65■■□□□ 1.7
UBFD1-210ENST00000571064 MORN1Q5T089 497 aa25.65■■□□□ 1.7
UBFD1-210ENST00000571064 GPR142Q7Z601 462 aa25.65■■□□□ 1.7
UBFD1-210ENST00000571064 CCAR1Q8IX12 1150 aaKnown RBP25.65■■□□□ 1.7
UBFD1-210ENST00000571064 EPB41L4AQ9HCS5 686 aaPredicted RBP25.65■■□□□ 1.7
UBFD1-210ENST00000571064 ATP8A2Q9NTI2 1148 aa25.65■■□□□ 1.7
UBFD1-210ENST00000571064 PALD1Q9ULE6 856 aa25.65■■□□□ 1.7
UBFD1-210ENST00000571064 CCDC171Q6TFL3 1326 aa25.64■■□□□ 1.7
UBFD1-210ENST00000571064 ERVK-9P63128 1117 aa25.64■■□□□ 1.7
UBFD1-210ENST00000571064 ERVK-24P63145 666 aa25.64■■□□□ 1.7
UBFD1-210ENST00000571064 POTEEQ6S8J3 1075 aa25.64■■□□□ 1.7
UBFD1-210ENST00000571064 LBHD1Q9BQE6 289 aaPredicted RBP25.64■■□□□ 1.7
UBFD1-210ENST00000571064 PAGR1Q9BTK6 254 aa25.64■■□□□ 1.7
UBFD1-210ENST00000571064 PI4KBQ9UBF8 816 aa25.64■■□□□ 1.7
UBFD1-210ENST00000571064 PATL2C9JE40 543 aaKnown RBP25.63■■□□□ 1.69
UBFD1-210ENST00000571064 CDC45O75419 566 aa25.63■■□□□ 1.69
UBFD1-210ENST00000571064 ASNSP08243 561 aa25.63■■□□□ 1.69
UBFD1-210ENST00000571064 GNAT2P19087 354 aa25.63■■□□□ 1.69
UBFD1-210ENST00000571064 PLEKHH3Q7Z736 793 aa25.63■■□□□ 1.69
UBFD1-210ENST00000571064 APBA2Q99767 749 aa25.63■■□□□ 1.69
UBFD1-210ENST00000571064 SENP6Q9GZR1 1112 aaPredicted RBP25.63■■□□□ 1.69
UBFD1-210ENST00000571064 LAMA2P24043 3122 aaKnown RBP25.63■■□□□ 1.69
UBFD1-210ENST00000571064 VCANP13611 3396 aa25.62■■□□□ 1.69
UBFD1-210ENST00000571064 CYP2D6P10635 497 aa25.62■■□□□ 1.69
UBFD1-210ENST00000571064 DNAJC18Q9H819 358 aa25.62■■□□□ 1.69
UBFD1-210ENST00000571064 C19orf81C9J6K1 198 aa25.61■■□□□ 1.69
UBFD1-210ENST00000571064 USP17L10C9JJH3 530 aa25.61■■□□□ 1.69
UBFD1-210ENST00000571064 SMIM22K7EJ46 135 aa25.61■■□□□ 1.69
UBFD1-210ENST00000571064 SGSM2O43147 1006 aa25.61■■□□□ 1.69
UBFD1-210ENST00000571064 IFNL3Q8IZI9 196 aa25.61■■□□□ 1.69
UBFD1-210ENST00000571064 MCM9Q9NXL9 1143 aa25.61■■□□□ 1.69
UBFD1-210ENST00000571064 RAD50Q92878 1312 aa25.61■■□□□ 1.69
UBFD1-210ENST00000571064 CYP2D7A0A087X1C5 515 aa25.6■■□□□ 1.69
UBFD1-210ENST00000571064 GDF11O95390 407 aa25.6■■□□□ 1.69
UBFD1-210ENST00000571064 HSPD1P10809 573 aaKnown RBP25.6■■□□□ 1.69
UBFD1-210ENST00000571064 PLCD1P51178 756 aa25.6■■□□□ 1.69
UBFD1-210ENST00000571064 ATN1P54259 1190 aaPredicted RBP25.6■■□□□ 1.69
UBFD1-210ENST00000571064 ZNF697Q5TEC3 545 aa25.6■■□□□ 1.69
UBFD1-210ENST00000571064 GIMAP6Q6P9H5 292 aa25.6■■□□□ 1.69
UBFD1-210ENST00000571064 RUFY2Q8WXA3 655 aa25.6■■□□□ 1.69
UBFD1-210ENST00000571064 ESYT1Q9BSJ8 1104 aa25.6■■□□□ 1.69
UBFD1-210ENST00000571064 DHX36Q9H2U1 1008 aaKnown RBP25.6■■□□□ 1.69
UBFD1-210ENST00000571064 FLRT1Q9NZU1 646 aa25.6■■□□□ 1.69
UBFD1-210ENST00000571064 USP17L12C9JPN9 530 aa25.59■■□□□ 1.69
UBFD1-210ENST00000571064 USP17L21D6R901 530 aa25.59■■□□□ 1.69
UBFD1-210ENST00000571064 APPP05067 770 aa25.59■■□□□ 1.69
UBFD1-210ENST00000571064 CTR9Q6PD62 1173 aa25.59■■□□□ 1.69
UBFD1-210ENST00000571064 EMILIN3Q9NT22 766 aa25.59■■□□□ 1.69
UBFD1-210ENST00000571064 EYSQ5T1H1 3165 aa25.59■■□□□ 1.69
UBFD1-210ENST00000571064 DNAH12Q6ZR08 3092 aa25.59■■□□□ 1.69
UBFD1-210ENST00000571064 FRMPD3Q5JV73 1810 aa25.58■■□□□ 1.69
UBFD1-210ENST00000571064 MAP2K5Q13163 448 aa25.58■■□□□ 1.69
UBFD1-210ENST00000571064 CDX2Q99626 313 aaPredicted RBP25.58■■□□□ 1.69
UBFD1-210ENST00000571064 CWC22Q9HCG8 908 aaKnown RBP25.58■■□□□ 1.69
UBFD1-210ENST00000571064 POLR3DP05423 398 aaPredicted RBP25.57■■□□□ 1.68
UBFD1-210ENST00000571064 MFAP1P55081 439 aaKnown RBP25.57■■□□□ 1.68
UBFD1-210ENST00000571064 ALX1Q15699 326 aa25.57■■□□□ 1.68
UBFD1-210ENST00000571064 C12orf60Q5U649 245 aa25.57■■□□□ 1.68
UBFD1-210ENST00000571064 METTL16Q86W50 562 aaKnown RBP25.57■■□□□ 1.68
UBFD1-210ENST00000571064 CRACR2BQ8N4Y2 399 aaPredicted RBP25.57■■□□□ 1.68
UBFD1-210ENST00000571064 ZBTB21Q9ULJ3 1066 aa25.57■■□□□ 1.68
UBFD1-210ENST00000571064 PTH1RQ03431 593 aa25.56■■□□□ 1.68
UBFD1-210ENST00000571064 SBK1Q52WX2 424 aa25.56■■□□□ 1.68
UBFD1-210ENST00000571064 MFSD14CQ5VZR4 134 aa25.56■■□□□ 1.68
UBFD1-210ENST00000571064 GTF3C2Q8WUA4 911 aaPredicted RBP25.56■■□□□ 1.68
UBFD1-210ENST00000571064 DDX20Q9UHI6 824 aaKnown RBP25.56■■□□□ 1.68
UBFD1-210ENST00000571064 CNMDO75829 334 aa25.55■■□□□ 1.68
UBFD1-210ENST00000571064 FGAP02671 866 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms