RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 POLR3DP05423 398 aaPredicted RBP20.03■□□□□ 0.8
RPAIN-208ENST00000571043 U2AF2P26368 475 aaKnown RBP eCLIP20.03■□□□□ 0.82e-8■□□□□ 9.8
RPAIN-208ENST00000571043 TCP10Q12799 353 aa20.03■□□□□ 0.8
RPAIN-208ENST00000571043 ANGEL2Q5VTE6 544 aaKnown RBP20.03■□□□□ 0.8
RPAIN-208ENST00000571043 KCNG4Q8TDN1 519 aa20.03■□□□□ 0.8
RPAIN-208ENST00000571043 ANP32BQ92688 251 aaKnown RBP20.03■□□□□ 0.8
RPAIN-208ENST00000571043 TCP11L1Q9NUJ3 509 aa20.03■□□□□ 0.8
RPAIN-208ENST00000571043 CNTNAP1P78357 1384 aa20.03■□□□□ 0.8
RPAIN-208ENST00000571043 TNNI2P48788 182 aa20.02■□□□□ 0.8
RPAIN-208ENST00000571043 CEBPZQ03701 1054 aaKnown RBP20.02■□□□□ 0.8
RPAIN-208ENST00000571043 TNFAIP1Q13829 316 aa20.02■□□□□ 0.8
RPAIN-208ENST00000571043 FAM47AQ5JRC9 791 aa20.02■□□□□ 0.8
RPAIN-208ENST00000571043 DGKHQ86XP1 1220 aa20.02■□□□□ 0.8
RPAIN-208ENST00000571043 LINC00301Q8NCQ3 95 aa20.02■□□□□ 0.8
RPAIN-208ENST00000571043 FTOQ9C0B1 505 aaKnown RBP eCLIP20.02■□□□□ 0.8
RPAIN-208ENST00000571043 NUP62CLQ9H1M0 184 aa20.02■□□□□ 0.8
RPAIN-208ENST00000571043 TCHHQ07283 1943 aa20.02■□□□□ 0.8
RPAIN-208ENST00000571043 DDX60LQ5H9U9 1706 aaKnown RBP20.02■□□□□ 0.79
RPAIN-208ENST00000571043 TFAP4Q01664 338 aa20.02■□□□□ 0.79
RPAIN-208ENST00000571043 APOBEC3FQ8IUX4 373 aaKnown RBP20.02■□□□□ 0.79
RPAIN-208ENST00000571043 DHX36Q9H2U1 1008 aaKnown RBP20.02■□□□□ 0.79
RPAIN-208ENST00000571043 MKNK2Q9HBH9 465 aa20.02■□□□□ 0.79
RPAIN-208ENST00000571043 DACT1Q9NYF0 836 aa20.02■□□□□ 0.79
RPAIN-208ENST00000571043 GGA3Q9NZ52 723 aa20.02■□□□□ 0.79
RPAIN-208ENST00000571043 SAP30BPQ9UHR5 308 aaKnown RBP20.02■□□□□ 0.79
RPAIN-208ENST00000571043 PRPF3O43395 683 aaKnown RBP20.01■□□□□ 0.79
RPAIN-208ENST00000571043 AKAP17AQ02040 695 aaKnown RBP20.01■□□□□ 0.79
RPAIN-208ENST00000571043 FUT2Q10981 343 aa20.01■□□□□ 0.79
RPAIN-208ENST00000571043 SAFBQ15424 915 aaKnown RBP eCLIP20.01■□□□□ 0.79
RPAIN-208ENST00000571043 SH3BP5LQ7L8J4 393 aa20.01■□□□□ 0.79
RPAIN-208ENST00000571043 DYNLL2Q96FJ2 89 aa20.01■□□□□ 0.79
RPAIN-208ENST00000571043 MAP3K14Q99558 947 aa20.01■□□□□ 0.79
RPAIN-208ENST00000571043 FUCA2Q9BTY2 467 aa20.01■□□□□ 0.79
RPAIN-208ENST00000571043 CLSTN2Q9H4D0 955 aa20.01■□□□□ 0.79
RPAIN-208ENST00000571043 NMRK2Q9NPI5 230 aa20.01■□□□□ 0.79
RPAIN-208ENST00000571043 COL2A1P02458 1487 aaPredicted RBP20■□□□□ 0.79
RPAIN-208ENST00000571043 ATRNL1Q5VV63 1379 aa20■□□□□ 0.79
RPAIN-208ENST00000571043 A0A1W2PQ27 194 aa20■□□□□ 0.79
RPAIN-208ENST00000571043 A0A1W2PQ64 194 aa20■□□□□ 0.79
RPAIN-208ENST00000571043 A0A1W2PQD8 194 aa20■□□□□ 0.79
RPAIN-208ENST00000571043 DDTLA6NHG4 134 aaPredicted RBP20■□□□□ 0.79
RPAIN-208ENST00000571043 MMP1P03956 469 aa20■□□□□ 0.79
RPAIN-208ENST00000571043 GUCY1A2P33402 732 aa20■□□□□ 0.79
RPAIN-208ENST00000571043 PLCD1P51178 756 aa20■□□□□ 0.79
RPAIN-208ENST00000571043 CCDC173Q0VFZ6 552 aa20■□□□□ 0.79
RPAIN-208ENST00000571043 GNL2Q13823 731 aaKnown RBP20■□□□□ 0.79
RPAIN-208ENST00000571043 RASA3Q14644 834 aa20■□□□□ 0.79
RPAIN-208ENST00000571043 STK38Q15208 465 aa20■□□□□ 0.79
RPAIN-208ENST00000571043 MAP3K11Q16584 847 aa20■□□□□ 0.79
RPAIN-208ENST00000571043 ANO1Q5XXA6 986 aa20■□□□□ 0.79
RPAIN-208ENST00000571043 C16orf86Q6ZW13 317 aa20■□□□□ 0.79
RPAIN-208ENST00000571043 TMTC3Q6ZXV5 915 aa20■□□□□ 0.79
RPAIN-208ENST00000571043 ZNF444Q8N0Y2 327 aaPredicted RBP20■□□□□ 0.79
RPAIN-208ENST00000571043 CTCFLQ8NI51 663 aaPredicted RBP20■□□□□ 0.79
RPAIN-208ENST00000571043 ZNF526Q8TF50 670 aaPredicted RBP20■□□□□ 0.79
RPAIN-208ENST00000571043 GNL3Q9BVP2 549 aaKnown RBP eCLIP20■□□□□ 0.79
RPAIN-208ENST00000571043 DEFB129Q9H1M3 183 aa20■□□□□ 0.79
RPAIN-208ENST00000571043 LAMB1P07942 1786 aa20■□□□□ 0.79
RPAIN-208ENST00000571043 XBP1P17861 261 aa19.99■□□□□ 0.79
RPAIN-208ENST00000571043 ME1P48163 572 aa19.99■□□□□ 0.79
RPAIN-208ENST00000571043 EAPPQ56P03 285 aaPredicted RBP19.99■□□□□ 0.79
RPAIN-208ENST00000571043 ADALQ6DHV7 355 aa19.99■□□□□ 0.79
RPAIN-208ENST00000571043 RCSD1Q6JBY9 416 aa19.99■□□□□ 0.79
RPAIN-208ENST00000571043 RBM43Q6ZSC3 357 aaKnown RBP19.99■□□□□ 0.79
RPAIN-208ENST00000571043 CCAR1Q8IX12 1150 aaKnown RBP19.99■□□□□ 0.79
RPAIN-208ENST00000571043 DCPSQ96C86 337 aaKnown RBP19.99■□□□□ 0.79
RPAIN-208ENST00000571043 PPP1R9BQ96SB3 815 aa19.99■□□□□ 0.79
RPAIN-208ENST00000571043 FOXP1Q9H334 677 aaPredicted RBP19.99■□□□□ 0.79
RPAIN-208ENST00000571043 PI4KBQ9UBF8 816 aa19.99■□□□□ 0.79
RPAIN-208ENST00000571043 SCAF8Q9UPN6 1271 aaKnown RBP19.99■□□□□ 0.79
RPAIN-208ENST00000571043 CLIC4Q9Y696 253 aa19.99■□□□□ 0.79
RPAIN-208ENST00000571043 SPTLC2O15270 562 aa19.98■□□□□ 0.79
RPAIN-208ENST00000571043 NMT2O60551 498 aa19.98■□□□□ 0.79
RPAIN-208ENST00000571043 UVSSAQ2YD98 709 aa19.98■□□□□ 0.79
RPAIN-208ENST00000571043 TEPSINQ96N21 525 aa19.98■□□□□ 0.79
RPAIN-208ENST00000571043 TMEM39BQ9GZU3 492 aa19.98■□□□□ 0.79
RPAIN-208ENST00000571043 TNMDQ9H2S6 317 aa19.98■□□□□ 0.79
RPAIN-208ENST00000571043 KAT14Q9H8E8 782 aa19.98■□□□□ 0.79
RPAIN-208ENST00000571043 PCDHA7Q9UN72 937 aa19.98■□□□□ 0.79
RPAIN-208ENST00000571043 UBE2Q2LH0YL09 131 aa19.97■□□□□ 0.79
RPAIN-208ENST00000571043 NR1I2O75469 434 aa19.97■□□□□ 0.79
RPAIN-208ENST00000571043 RASA1P20936 1047 aa19.97■□□□□ 0.79
RPAIN-208ENST00000571043 KIF5BP33176 963 aa19.97■□□□□ 0.79
RPAIN-208ENST00000571043 SF3A1Q15459 793 aaKnown RBP19.97■□□□□ 0.79
RPAIN-208ENST00000571043 CCDC73Q6ZRK6 1079 aa19.97■□□□□ 0.79
RPAIN-208ENST00000571043 METTL16Q86W50 562 aaKnown RBP19.97■□□□□ 0.79
RPAIN-208ENST00000571043 FOXP4Q8IVH2 680 aaPredicted RBP19.97■□□□□ 0.79
RPAIN-208ENST00000571043 ZSCAN29Q8IWY8 852 aaPredicted RBP19.97■□□□□ 0.79
RPAIN-208ENST00000571043 IL17RBQ9NRM6 502 aa19.97■□□□□ 0.79
RPAIN-208ENST00000571043 PPP2R3BQ9Y5P8 575 aa19.97■□□□□ 0.79
RPAIN-208ENST00000571043 HLA-DOAP06340 250 aa19.97■□□□□ 0.79
RPAIN-208ENST00000571043 POTEIP0CG38 1075 aa19.97■□□□□ 0.79
RPAIN-208ENST00000571043 POTEJP0CG39 1038 aa19.97■□□□□ 0.79
RPAIN-208ENST00000571043 TSPY3P0CV98 308 aa19.97■□□□□ 0.79
RPAIN-208ENST00000571043 TSPY8P0CW00 308 aa19.97■□□□□ 0.79
RPAIN-208ENST00000571043 CCDC192P0DO97 292 aa19.97■□□□□ 0.79
RPAIN-208ENST00000571043 CDK8P49336 464 aa19.97■□□□□ 0.79
RPAIN-208ENST00000571043 SLC39A14Q15043 492 aa19.97■□□□□ 0.79
RPAIN-208ENST00000571043 PKN1Q16512 942 aa19.97■□□□□ 0.79
RPAIN-208ENST00000571043 SLC4A8Q2Y0W8 1093 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms