RNA–Protein interactions for RNA: ENST00000569957.5

INO80E-213, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 4,469 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-213ENST00000569957 VPS36Q86VN1 386 aa14.17□□□□□ -0.14
INO80E-213ENST00000569957 ZNF408Q9H9D4 720 aa14.17□□□□□ -0.14
INO80E-213ENST00000569957 BCS1LQ9Y276 419 aa14.17□□□□□ -0.14
INO80E-213ENST00000569957 FSD2A1L4K1 749 aa14.17□□□□□ -0.14
INO80E-213ENST00000569957 ATL3Q6DD88 541 aa14.17□□□□□ -0.14
INO80E-213ENST00000569957 IGSF22Q8N9C0 903 aa14.17□□□□□ -0.14
INO80E-213ENST00000569957 LRWD1Q9UFC0 647 aa14.17□□□□□ -0.14
INO80E-213ENST00000569957 ABCC6O95255 1503 aa14.17□□□□□ -0.14
INO80E-213ENST00000569957 SPATA31A1Q5TZJ5 1347 aa14.17□□□□□ -0.14
INO80E-213ENST00000569957 USP17L3A6NCW0 530 aa14.17□□□□□ -0.14
INO80E-213ENST00000569957 USP17L4A6NCW7 530 aa14.17□□□□□ -0.14
INO80E-213ENST00000569957 TOB2Q14106 344 aaPredicted RBP14.17□□□□□ -0.14
INO80E-213ENST00000569957 USP17L1Q7RTZ2 530 aa14.17□□□□□ -0.14
INO80E-213ENST00000569957 C2CD5Q86YS7 1000 aa14.17□□□□□ -0.14
INO80E-213ENST00000569957 PAF1Q8N7H5 531 aa14.17□□□□□ -0.14
INO80E-213ENST00000569957 SNX29Q8TEQ0 813 aa14.17□□□□□ -0.14
INO80E-213ENST00000569957 PYM1Q9BRP8 204 aaKnown RBP14.17□□□□□ -0.14
INO80E-213ENST00000569957 ISCA1Q9BUE6 129 aa14.17□□□□□ -0.14
INO80E-213ENST00000569957 A0A0G2JLW4 131 aa14.16□□□□□ -0.14
INO80E-213ENST00000569957 SLC16A2P36021 539 aa14.16□□□□□ -0.14
INO80E-213ENST00000569957 PTGDRQ13258 359 aa14.16□□□□□ -0.14
INO80E-213ENST00000569957 NONOQ15233 471 aaKnown RBP eCLIP14.16□□□□□ -0.14
INO80E-213ENST00000569957 SMYD4Q8IYR2 804 aaPredicted RBP14.16□□□□□ -0.14
INO80E-213ENST00000569957 SLC44A5Q8NCS7 719 aa14.16□□□□□ -0.14
INO80E-213ENST00000569957 TEKT1Q969V4 418 aa14.16□□□□□ -0.14
INO80E-213ENST00000569957 POLD1P28340 1107 aa14.16□□□□□ -0.14
INO80E-213ENST00000569957 TECP42680 631 aa14.16□□□□□ -0.14
INO80E-213ENST00000569957 ADKP55263 362 aaKnown RBP14.16□□□□□ -0.14
INO80E-213ENST00000569957 FOXO4P98177 505 aa14.16□□□□□ -0.14
INO80E-213ENST00000569957 SPAG1Q07617 926 aa14.16□□□□□ -0.14
INO80E-213ENST00000569957 TRIM28Q13263 835 aaKnown RBP14.16□□□□□ -0.14
INO80E-213ENST00000569957 ZNF569Q5MCW4 686 aa14.16□□□□□ -0.14
INO80E-213ENST00000569957 TBC1D9BQ66K14 1250 aa14.16□□□□□ -0.14
INO80E-213ENST00000569957 ZFP91Q96JP5 570 aaPredicted RBP14.16□□□□□ -0.14
INO80E-213ENST00000569957 ZDHHC9Q9Y397 364 aa14.16□□□□□ -0.14
INO80E-213ENST00000569957 PCDHA5Q9Y5H7 936 aa14.16□□□□□ -0.14
INO80E-213ENST00000569957 REXO1Q8N1G1 1221 aaKnown RBP14.16□□□□□ -0.14
INO80E-213ENST00000569957 FAM212AQ96EL1 285 aa14.16□□□□□ -0.14
INO80E-213ENST00000569957 CCDC42Q96M95 316 aa14.16□□□□□ -0.14
INO80E-213ENST00000569957 STRBPQ96SI9 672 aaKnown RBP14.16□□□□□ -0.14
INO80E-213ENST00000569957 LUC7L2Q9Y383 392 aaKnown RBP14.16□□□□□ -0.14
INO80E-213ENST00000569957 SORBS3O60504 671 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 NEFHP12036 1026 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 PPARDQ03181 441 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 DMTNQ08495 405 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 PDIA6Q15084 440 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 CSGALNACT2Q8N6G5 542 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 RGS22Q8NE09 1264 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 KIFC2Q96AC6 838 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 CCDC113Q9H0I3 377 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 AFF2P51816 1311 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 FAM196BA6NMK8 535 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 BACH1O14867 736 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 NMT2O60551 498 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 RNASE9P60153 205 aaKnown RBP14.15□□□□□ -0.14
INO80E-213ENST00000569957 GOLGA8FQ08AF8 430 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 GOLGA8DPQ0D2H9 430 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 TTC31Q49AM3 519 aaPredicted RBP14.15□□□□□ -0.14
INO80E-213ENST00000569957 HERC4Q5GLZ8 1057 aaPredicted RBP14.15□□□□□ -0.14
INO80E-213ENST00000569957 NCAPH2Q6IBW4 605 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 USP17L2Q6R6M4 530 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 SV2BQ7L1I2 683 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 FAM114A1Q8IWE2 563 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 PSMB7Q99436 277 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 EHMT1Q9H9B1 1298 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 ZMYM6O95789 1325 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 HARSP12081 509 aaKnown RBP14.15□□□□□ -0.14
INO80E-213ENST00000569957 MYCLP12524 364 aaPredicted RBP14.15□□□□□ -0.14
INO80E-213ENST00000569957 MECOMQ03112 1051 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 TBC1D10CQ8IV04 446 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 CTAGE1Q96RT6 745 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 BAG1Q99933 345 aaPredicted RBP14.15□□□□□ -0.14
INO80E-213ENST00000569957 CARMIL3Q8ND23 1372 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 PXDNQ92626 1479 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 DLGAP5Q15398 846 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 CLEC4GQ6UXB4 293 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 FANCLQ9NW38 375 aa14.15□□□□□ -0.14
INO80E-213ENST00000569957 ARPP21Q9UBL0 812 aaPredicted RBP14.15□□□□□ -0.14
INO80E-213ENST00000569957 RAD17O75943 681 aa14.14□□□□□ -0.15
INO80E-213ENST00000569957 CCDC175P0C221 793 aa14.14□□□□□ -0.15
INO80E-213ENST00000569957 RAPGEF1Q13905 1077 aa14.14□□□□□ -0.15
INO80E-213ENST00000569957 KRT27Q7Z3Y8 459 aa14.14□□□□□ -0.15
INO80E-213ENST00000569957 CCDC91Q7Z6B0 441 aa14.14□□□□□ -0.15
INO80E-213ENST00000569957 LRRC37A3O60309 1634 aa14.14□□□□□ -0.15
INO80E-213ENST00000569957 FAM13AO94988 1023 aa14.14□□□□□ -0.15
INO80E-213ENST00000569957 DPCR1Q3MIW9 517 aa14.14□□□□□ -0.15
INO80E-213ENST00000569957 ATG9AQ7Z3C6 839 aa14.14□□□□□ -0.15
INO80E-213ENST00000569957 IPO4Q8TEX9 1081 aaKnown RBP14.14□□□□□ -0.15
INO80E-213ENST00000569957 ERO1AQ96HE7 468 aa14.14□□□□□ -0.15
INO80E-213ENST00000569957 TUBBP07437 444 aa14.14□□□□□ -0.15
INO80E-213ENST00000569957 MINPP1Q9UNW1 487 aa14.14□□□□□ -0.15
INO80E-213ENST00000569957 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.14□□□□□ -0.153e-6■■■□□ 16
INO80E-213ENST00000569957 PHRF1Q9P1Y6 1649 aaKnown RBP14.14□□□□□ -0.15
INO80E-213ENST00000569957 MMP10P09238 476 aa14.13□□□□□ -0.15
INO80E-213ENST00000569957 RHOXF2BP0C7M4 288 aa14.13□□□□□ -0.15
INO80E-213ENST00000569957 SCG2P13521 617 aa14.13□□□□□ -0.15
INO80E-213ENST00000569957 CETN1Q12798 172 aa14.13□□□□□ -0.15
INO80E-213ENST00000569957 VPS72Q15906 364 aa14.13□□□□□ -0.15
INO80E-213ENST00000569957 RDH13Q8NBN7 331 aa14.13□□□□□ -0.15
INO80E-213ENST00000569957 RHOXF2Q9BQY4 288 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms