RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-223ENST00000569784 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.33□□□□□ -0.76
SCAPER-223ENST00000569784 HMX1Q9NP08 348 aaPredicted RBP10.33□□□□□ -0.76
SCAPER-223ENST00000569784 COG6Q9Y2V7 657 aa10.33□□□□□ -0.76
SCAPER-223ENST00000569784 KIAA0100Q14667 2235 aaKnown RBP10.32□□□□□ -0.76
SCAPER-223ENST00000569784 FAM205CA6NFA0 338 aa10.32□□□□□ -0.76
SCAPER-223ENST00000569784 GOLIM4O00461 696 aa10.32□□□□□ -0.76
SCAPER-223ENST00000569784 MAPK4P31152 587 aa10.32□□□□□ -0.76
SCAPER-223ENST00000569784 HERVK_113P62684 666 aa10.32□□□□□ -0.76
SCAPER-223ENST00000569784 SOCS4Q8WXH5 440 aa10.32□□□□□ -0.76
SCAPER-223ENST00000569784 P2RX7Q99572 595 aaKnown RBP10.32□□□□□ -0.76
SCAPER-223ENST00000569784 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.32□□□□□ -0.76
SCAPER-223ENST00000569784 ANTXR1Q9H6X2 564 aa10.32□□□□□ -0.76
SCAPER-223ENST00000569784 MCM9Q9NXL9 1143 aa10.32□□□□□ -0.76
SCAPER-223ENST00000569784 IVNS1ABPQ9Y6Y0 642 aa10.32□□□□□ -0.76
SCAPER-223ENST00000569784 NAV1Q8NEY1 1877 aa10.32□□□□□ -0.76
SCAPER-223ENST00000569784 MYH8P13535 1937 aa10.31□□□□□ -0.76
SCAPER-223ENST00000569784 SPDYE16A6NNV3 312 aaPredicted RBP10.31□□□□□ -0.76
SCAPER-223ENST00000569784 USP17L15C9J2P7 530 aa10.31□□□□□ -0.76
SCAPER-223ENST00000569784 USP17L13C9JLJ4 530 aa10.31□□□□□ -0.76
SCAPER-223ENST00000569784 USP17L11C9JVI0 530 aa10.31□□□□□ -0.76
SCAPER-223ENST00000569784 USP17L18D6R9N7 530 aa10.31□□□□□ -0.76
SCAPER-223ENST00000569784 USP17L22D6RA61 530 aa10.31□□□□□ -0.76
SCAPER-223ENST00000569784 USP17L17D6RBQ6 530 aa10.31□□□□□ -0.76
SCAPER-223ENST00000569784 USP17L19D6RCP7 530 aa10.31□□□□□ -0.76
SCAPER-223ENST00000569784 USP17L20D6RJB6 530 aa10.31□□□□□ -0.76
SCAPER-223ENST00000569784 RAD21O60216 631 aa10.31□□□□□ -0.76
SCAPER-223ENST00000569784 RAB11FIP3O75154 756 aa10.31□□□□□ -0.76
SCAPER-223ENST00000569784 ZKSCAN1P17029 563 aaPredicted RBP10.31□□□□□ -0.76
SCAPER-223ENST00000569784 USP17L24Q0WX57 530 aa10.31□□□□□ -0.76
SCAPER-223ENST00000569784 RRP1BQ14684 758 aaKnown RBP10.31□□□□□ -0.76
SCAPER-223ENST00000569784 NECAB2Q7Z6G3 386 aa10.31□□□□□ -0.76
SCAPER-223ENST00000569784 TRMT44Q8IYL2 757 aaKnown RBP10.31□□□□□ -0.76
SCAPER-223ENST00000569784 SHISA4Q96DD7 197 aa10.31□□□□□ -0.76
SCAPER-223ENST00000569784 RPTORQ8N122 1335 aa10.31□□□□□ -0.76
SCAPER-223ENST00000569784 SIPA1L1O43166 1804 aa10.3□□□□□ -0.76
SCAPER-223ENST00000569784 HOXA7P31268 230 aaPredicted RBP10.3□□□□□ -0.76
SCAPER-223ENST00000569784 RGS2P41220 211 aa10.3□□□□□ -0.76
SCAPER-223ENST00000569784 MLLT3P42568 568 aaPredicted RBP10.3□□□□□ -0.76
SCAPER-223ENST00000569784 ERVK-9P63128 1117 aa10.3□□□□□ -0.76
SCAPER-223ENST00000569784 ERVK-24P63145 666 aa10.3□□□□□ -0.76
SCAPER-223ENST00000569784 PLEKHH3Q7Z736 793 aa10.3□□□□□ -0.76
SCAPER-223ENST00000569784 DDX12PQ92771 950 aa10.3□□□□□ -0.76
SCAPER-223ENST00000569784 TANGO6Q9C0B7 1094 aa10.3□□□□□ -0.76
SCAPER-223ENST00000569784 EHD4Q9H223 541 aa10.3□□□□□ -0.76
SCAPER-223ENST00000569784 BOLA2Q9H3K6 86 aa10.3□□□□□ -0.76
SCAPER-223ENST00000569784 DNAJC18Q9H819 358 aa10.3□□□□□ -0.76
SCAPER-223ENST00000569784 MORF4L1Q9UBU8 362 aa10.3□□□□□ -0.76
SCAPER-223ENST00000569784 RCAN3Q9UKA8 241 aa10.3□□□□□ -0.76
SCAPER-223ENST00000569784 ZNF532Q9HCE3 1301 aa10.3□□□□□ -0.76
SCAPER-223ENST00000569784 POTEMA6NI47 508 aa10.29□□□□□ -0.76
SCAPER-223ENST00000569784 PDE6AP16499 860 aa10.29□□□□□ -0.76
SCAPER-223ENST00000569784 CNGA1P29973 690 aa10.29□□□□□ -0.76
SCAPER-223ENST00000569784 VARS2Q5ST30 1063 aaKnown RBP10.29□□□□□ -0.76
SCAPER-223ENST00000569784 ZSCAN25Q6NSZ9 544 aa10.29□□□□□ -0.76
SCAPER-223ENST00000569784 POTEGQ6S5H5 508 aa10.29□□□□□ -0.76
SCAPER-223ENST00000569784 GPATCH3Q96I76 525 aa10.29□□□□□ -0.76
SCAPER-223ENST00000569784 PAWRQ96IZ0 340 aaKnown RBP10.29□□□□□ -0.76
SCAPER-223ENST00000569784 SH2D4AQ9H788 454 aa10.29□□□□□ -0.76
SCAPER-223ENST00000569784 ARHGEF10LQ9HCE6 1279 aa10.29□□□□□ -0.76
SCAPER-223ENST00000569784 PAG1Q9NWQ8 432 aa10.29□□□□□ -0.76
SCAPER-223ENST00000569784 ATP2B2Q01814 1243 aa10.28□□□□□ -0.76
SCAPER-223ENST00000569784 PLS1Q14651 629 aa10.28□□□□□ -0.76
SCAPER-223ENST00000569784 SHROOM1Q2M3G4 852 aaPredicted RBP10.28□□□□□ -0.76
SCAPER-223ENST00000569784 MFSD14CQ5VZR4 134 aa10.28□□□□□ -0.76
SCAPER-223ENST00000569784 TATDN1Q6P1N9 297 aa10.28□□□□□ -0.76
SCAPER-223ENST00000569784 GPR142Q7Z601 462 aa10.28□□□□□ -0.76
SCAPER-223ENST00000569784 METTL16Q86W50 562 aaKnown RBP10.28□□□□□ -0.76
SCAPER-223ENST00000569784 C7orf61Q8IZ16 206 aa10.28□□□□□ -0.76
SCAPER-223ENST00000569784 ANKLE1Q8NAG6 615 aa10.28□□□□□ -0.76
SCAPER-223ENST00000569784 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.28□□□□□ -0.76
SCAPER-223ENST00000569784 SDR42E1Q8WUS8 393 aa10.28□□□□□ -0.76
SCAPER-223ENST00000569784 HS3ST6Q96QI5 342 aa10.28□□□□□ -0.76
SCAPER-223ENST00000569784 LRRCC1Q9C099 1032 aa10.28□□□□□ -0.76
SCAPER-223ENST00000569784 NBPF3Q9H094 633 aa10.28□□□□□ -0.76
SCAPER-223ENST00000569784 C11orf49Q9H6J7 331 aa10.28□□□□□ -0.76
SCAPER-223ENST00000569784 RPAP3Q9H6T3 665 aaPredicted RBP10.28□□□□□ -0.76
SCAPER-223ENST00000569784 PAK6Q9NQU5 681 aaPredicted RBP10.28□□□□□ -0.76
SCAPER-223ENST00000569784 SWAP70Q9UH65 585 aa10.28□□□□□ -0.76
SCAPER-223ENST00000569784 RABGAP1Q9Y3P9 1069 aa10.28□□□□□ -0.76
SCAPER-223ENST00000569784 PCDHGA10Q9Y5H3 936 aa10.28□□□□□ -0.76
SCAPER-223ENST00000569784 DOCK3Q8IZD9 2030 aa10.28□□□□□ -0.76
SCAPER-223ENST00000569784 PEX10O60683 326 aa10.27□□□□□ -0.77
SCAPER-223ENST00000569784 MBD4O95243 580 aa10.27□□□□□ -0.77
SCAPER-223ENST00000569784 PLCD1P51178 756 aa10.27□□□□□ -0.77
SCAPER-223ENST00000569784 FOSBP53539 338 aa10.27□□□□□ -0.77
SCAPER-223ENST00000569784 JAG1P78504 1218 aa10.27□□□□□ -0.77
SCAPER-223ENST00000569784 SEPT2Q15019 361 aa10.27□□□□□ -0.77
SCAPER-223ENST00000569784 CATSPERGQ6ZRH7 1159 aa10.27□□□□□ -0.77
SCAPER-223ENST00000569784 DPP9Q86TI2 863 aa10.27□□□□□ -0.77
SCAPER-223ENST00000569784 TRIB2Q92519 343 aa10.27□□□□□ -0.77
SCAPER-223ENST00000569784 EDC3Q96F86 508 aaKnown RBP10.27□□□□□ -0.77
SCAPER-223ENST00000569784 APBA2Q99767 749 aa10.27□□□□□ -0.77
SCAPER-223ENST00000569784 KIAA1683Q9H0B3 1180 aa10.27□□□□□ -0.77
SCAPER-223ENST00000569784 ARMT1Q9H993 441 aa10.27□□□□□ -0.77
SCAPER-223ENST00000569784 TXNRD2Q9NNW7 524 aa10.27□□□□□ -0.77
SCAPER-223ENST00000569784 ATP8A2Q9NTI2 1148 aa10.27□□□□□ -0.77
SCAPER-223ENST00000569784 RBPJLQ9UBG7 517 aa10.27□□□□□ -0.77
SCAPER-223ENST00000569784 CTDP1Q9Y5B0 961 aaPredicted RBP10.27□□□□□ -0.77
SCAPER-223ENST00000569784 XRCC5P13010 732 aaKnown RBP10.26□□□□□ -0.77
SCAPER-223ENST00000569784 VCAM1P19320 739 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms