RNA–Protein interactions for RNA: ENST00000569768.1

THUMPD1-204, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-204ENST00000569768 CTDNEP1O95476 244 aa17.2■□□□□ 0.34
THUMPD1-204ENST00000569768 CDC27P30260 824 aa17.2■□□□□ 0.34
THUMPD1-204ENST00000569768 NUP133Q8WUM0 1156 aa17.2■□□□□ 0.34
THUMPD1-204ENST00000569768 WRNIP1Q96S55 665 aa17.2■□□□□ 0.34
THUMPD1-204ENST00000569768 MYL10Q9BUA6 226 aa17.2■□□□□ 0.34
THUMPD1-204ENST00000569768 TMX2Q9Y320 296 aa17.2■□□□□ 0.34
THUMPD1-204ENST00000569768 MYH4Q9Y623 1939 aa17.19■□□□□ 0.34
THUMPD1-204ENST00000569768 PALM3A6NDB9 673 aaPredicted RBP17.19■□□□□ 0.34
THUMPD1-204ENST00000569768 IREB2P48200 963 aaKnown RBP17.19■□□□□ 0.34
THUMPD1-204ENST00000569768 FKBP1BP68106 108 aa17.19■□□□□ 0.34
THUMPD1-204ENST00000569768 RAB3GAP1Q15042 981 aa17.19■□□□□ 0.34
THUMPD1-204ENST00000569768 ASPRV1Q53RT3 343 aa17.19■□□□□ 0.34
THUMPD1-204ENST00000569768 GPATCH4Q5T3I0 446 aaKnown RBP17.19■□□□□ 0.34
THUMPD1-204ENST00000569768 TMTC3Q6ZXV5 915 aa17.19■□□□□ 0.34
THUMPD1-204ENST00000569768 DCAF4Q8WV16 495 aa17.19■□□□□ 0.34
THUMPD1-204ENST00000569768 WDR18Q9BV38 432 aa17.19■□□□□ 0.34
THUMPD1-204ENST00000569768 GLIS2Q9BZE0 524 aaPredicted RBP17.19■□□□□ 0.34
THUMPD1-204ENST00000569768 NCOA5Q9HCD5 579 aaKnown RBP17.19■□□□□ 0.34
THUMPD1-204ENST00000569768 NMRK2Q9NPI5 230 aa17.19■□□□□ 0.34
THUMPD1-204ENST00000569768 RBM27Q9P2N5 1060 aaKnown RBP17.19■□□□□ 0.34
THUMPD1-204ENST00000569768 CLEC11AQ9Y240 323 aa17.19■□□□□ 0.34
THUMPD1-204ENST00000569768 PTPDC1A2A3K4 754 aa17.18■□□□□ 0.34
THUMPD1-204ENST00000569768 USP17L5A8MUK1 530 aa17.18■□□□□ 0.34
THUMPD1-204ENST00000569768 PDHBP11177 359 aa17.18■□□□□ 0.34
THUMPD1-204ENST00000569768 PDCP20941 246 aa17.18■□□□□ 0.34
THUMPD1-204ENST00000569768 INPP5BP32019 993 aa17.18■□□□□ 0.34
THUMPD1-204ENST00000569768 ADD1P35611 737 aaKnown RBP17.18■□□□□ 0.34
THUMPD1-204ENST00000569768 MAP3K9P80192 1104 aa17.18■□□□□ 0.34
THUMPD1-204ENST00000569768 SHROOM1Q2M3G4 852 aaPredicted RBP17.18■□□□□ 0.34
THUMPD1-204ENST00000569768 PRAMEF18Q5VWM3 479 aa17.18■□□□□ 0.34
THUMPD1-204ENST00000569768 CLEC10AQ8IUN9 316 aa17.18■□□□□ 0.34
THUMPD1-204ENST00000569768 GMCL1Q96IK5 515 aa17.18■□□□□ 0.34
THUMPD1-204ENST00000569768 RNF26Q9BY78 433 aaPredicted RBP17.18■□□□□ 0.34
THUMPD1-204ENST00000569768 AS3MTQ9HBK9 375 aa17.18■□□□□ 0.34
THUMPD1-204ENST00000569768 PARP1P09874 1014 aaKnown RBP17.17■□□□□ 0.34
THUMPD1-204ENST00000569768 POTEIP0CG38 1075 aa17.17■□□□□ 0.34
THUMPD1-204ENST00000569768 POTEJP0CG39 1038 aa17.17■□□□□ 0.34
THUMPD1-204ENST00000569768 RXRAP19793 462 aa17.17■□□□□ 0.34
THUMPD1-204ENST00000569768 GJB2P29033 226 aa17.17■□□□□ 0.34
THUMPD1-204ENST00000569768 FUT2Q10981 343 aa17.17■□□□□ 0.34
THUMPD1-204ENST00000569768 LRRC47Q8N1G4 583 aaKnown RBP17.17■□□□□ 0.34
THUMPD1-204ENST00000569768 KIAA1683Q9H0B3 1180 aa17.17■□□□□ 0.34
THUMPD1-204ENST00000569768 GOPCQ9HD26 462 aa17.17■□□□□ 0.34
THUMPD1-204ENST00000569768 PICK1Q9NRD5 415 aa17.17■□□□□ 0.34
THUMPD1-204ENST00000569768 MAD2L2Q9UI95 211 aa17.17■□□□□ 0.34
THUMPD1-204ENST00000569768 A0A1W2PRG0 241 aa17.16■□□□□ 0.34
THUMPD1-204ENST00000569768 FMNL1O95466 1100 aaPredicted RBP17.16■□□□□ 0.34
THUMPD1-204ENST00000569768 PTPRAP18433 802 aa17.16■□□□□ 0.34
THUMPD1-204ENST00000569768 ZNF543Q08ER8 600 aa17.16■□□□□ 0.34
THUMPD1-204ENST00000569768 MAP1SQ66K74 1059 aaPredicted RBP17.16■□□□□ 0.34
THUMPD1-204ENST00000569768 ARMC9Q7Z3E5 817 aa17.16■□□□□ 0.34
THUMPD1-204ENST00000569768 NBPF11Q86T75 865 aa17.16■□□□□ 0.34
THUMPD1-204ENST00000569768 RAB11FIP4Q86YS3 637 aa17.16■□□□□ 0.34
THUMPD1-204ENST00000569768 TRIM22Q8IYM9 498 aa17.16■□□□□ 0.34
THUMPD1-204ENST00000569768 ANKRD13AQ8IZ07 590 aa17.16■□□□□ 0.34
THUMPD1-204ENST00000569768 WASF1Q92558 559 aa17.16■□□□□ 0.34
THUMPD1-204ENST00000569768 SPZ1Q9BXG8 430 aa17.16■□□□□ 0.34
THUMPD1-204ENST00000569768 VCPKMTQ9H867 229 aa17.16■□□□□ 0.34
THUMPD1-204ENST00000569768 CHMP5Q9NZZ3 219 aa17.16■□□□□ 0.34
THUMPD1-204ENST00000569768 OTOFQ9HC10 1997 aa17.15■□□□□ 0.34
THUMPD1-204ENST00000569768 F5H6K3 240 aa17.15■□□□□ 0.34
THUMPD1-204ENST00000569768 FDPSP14324 419 aaKnown RBP17.15■□□□□ 0.34
THUMPD1-204ENST00000569768 USP14P54578 494 aa17.15■□□□□ 0.34
THUMPD1-204ENST00000569768 NUCB2P80303 420 aa17.15■□□□□ 0.34
THUMPD1-204ENST00000569768 KLRC3Q07444 240 aa17.15■□□□□ 0.34
THUMPD1-204ENST00000569768 SLFN13Q68D06 897 aa17.15■□□□□ 0.34
THUMPD1-204ENST00000569768 CHADLQ6NUI6 762 aa17.15■□□□□ 0.34
THUMPD1-204ENST00000569768 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.15■□□□□ 0.34
THUMPD1-204ENST00000569768 CCDC144CPQ8IYA2 1237 aa17.15■□□□□ 0.34
THUMPD1-204ENST00000569768 FAM177A1Q8N128 213 aaPredicted RBP17.15■□□□□ 0.34
THUMPD1-204ENST00000569768 SPRYD3Q8NCJ5 442 aa17.15■□□□□ 0.34
THUMPD1-204ENST00000569768 LPAR1Q92633 364 aa17.15■□□□□ 0.34
THUMPD1-204ENST00000569768 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
THUMPD1-204ENST00000569768 CSADQ9Y600 493 aa17.15■□□□□ 0.34
THUMPD1-204ENST00000569768 CNTNAP5Q8WYK1 1306 aa17.15■□□□□ 0.34
THUMPD1-204ENST00000569768 PRPF3O43395 683 aaKnown RBP17.14■□□□□ 0.33
THUMPD1-204ENST00000569768 JAK2O60674 1132 aa17.14■□□□□ 0.33
THUMPD1-204ENST00000569768 PLA2G6O60733 806 aa17.14■□□□□ 0.33
THUMPD1-204ENST00000569768 DEXIO95424 95 aa17.14■□□□□ 0.33
THUMPD1-204ENST00000569768 NDUFB10O96000 172 aa17.14■□□□□ 0.33
THUMPD1-204ENST00000569768 ATP2B2Q01814 1243 aa17.14■□□□□ 0.33
THUMPD1-204ENST00000569768 SSRP1Q08945 709 aaKnown RBP17.14■□□□□ 0.33
THUMPD1-204ENST00000569768 VGLL4Q14135 290 aa17.14■□□□□ 0.33
THUMPD1-204ENST00000569768 FAM184AQ8NB25 1140 aa17.14■□□□□ 0.33
THUMPD1-204ENST00000569768 ORC3Q9UBD5 711 aaPredicted RBP17.14■□□□□ 0.33
THUMPD1-204ENST00000569768 SNCAIPQ9Y6H5 919 aa17.14■□□□□ 0.33
THUMPD1-204ENST00000569768 PHIPQ8WWQ0 1821 aa17.13■□□□□ 0.33
THUMPD1-204ENST00000569768 C19orf81C9J6K1 198 aa17.13■□□□□ 0.33
THUMPD1-204ENST00000569768 USP17L10C9JJH3 530 aa17.13■□□□□ 0.33
THUMPD1-204ENST00000569768 KLRF2D3W0D1 207 aa17.13■□□□□ 0.33
THUMPD1-204ENST00000569768 PLEKHA8P1O95397 391 aa17.13■□□□□ 0.33
THUMPD1-204ENST00000569768 ECE1P42892 770 aa17.13■□□□□ 0.33
THUMPD1-204ENST00000569768 SLC1A4P43007 532 aa17.13■□□□□ 0.33
THUMPD1-204ENST00000569768 LDLRAD1Q5T700 205 aa17.13■□□□□ 0.33
THUMPD1-204ENST00000569768 BTNL9Q6UXG8 535 aa17.13■□□□□ 0.33
THUMPD1-204ENST00000569768 STAG2Q8N3U4 1231 aa17.13■□□□□ 0.33
THUMPD1-204ENST00000569768 SRBD1Q8N5C6 995 aaKnown RBP17.13■□□□□ 0.33
THUMPD1-204ENST00000569768 ZNF280CQ8ND82 737 aa17.13■□□□□ 0.33
THUMPD1-204ENST00000569768 RBM46Q8TBY0 533 aaKnown RBP17.13■□□□□ 0.33
THUMPD1-204ENST00000569768 ACER1Q8TDN7 264 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms