RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 TAF1CQ15572 869 aaPredicted RBP7.59□□□□□ -1.19
SMG1-217ENST00000569764 TBC1D10BQ4KMP7 808 aaPredicted RBP7.59□□□□□ -1.19
SMG1-217ENST00000569764 PPM1EQ8WY54 764 aa7.59□□□□□ -1.19
SMG1-217ENST00000569764 JARID2Q92833 1246 aaPredicted RBP7.59□□□□□ -1.19
SMG1-217ENST00000569764 EHMT1Q9H9B1 1298 aa7.59□□□□□ -1.19
SMG1-217ENST00000569764 RYDENQ9NUL5 291 aaKnown RBP7.59□□□□□ -1.19
SMG1-217ENST00000569764 IBTKQ9P2D0 1353 aaPredicted RBP7.59□□□□□ -1.19
SMG1-217ENST00000569764 OATP04181 439 aa7.59□□□□□ -1.2
SMG1-217ENST00000569764 PIP4K2AP48426 406 aaPredicted RBP7.59□□□□□ -1.2
SMG1-217ENST00000569764 USP14P54578 494 aa7.59□□□□□ -1.2
SMG1-217ENST00000569764 SART3Q15020 963 aaKnown RBP7.59□□□□□ -1.2
SMG1-217ENST00000569764 CPLX2Q6PUV4 134 aaKnown RBP7.59□□□□□ -1.2
SMG1-217ENST00000569764 CHD1LQ86WJ1 897 aa7.59□□□□□ -1.2
SMG1-217ENST00000569764 IWS1Q96ST2 819 aa7.59□□□□□ -1.2
SMG1-217ENST00000569764 PNMA6EA0A0J9YXQ4 647 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 ABL1P00519 1130 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 SKILP12757 684 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 ANKRD45Q5TZF3 282 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 UBE3BQ7Z3V4 1068 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 MAATS1Q7Z4T9 603 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 C14orf80Q86SX3 495 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 TSPYL1Q9H0U9 437 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 TAF1DQ9H5J8 278 aaPredicted RBP7.58□□□□□ -1.2
SMG1-217ENST00000569764 UPF2Q9HAU5 1272 aaKnown RBP7.58□□□□□ -1.2
SMG1-217ENST00000569764 MAP3K2Q9Y2U5 619 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 RRP15Q9Y3B9 282 aaKnown RBP7.58□□□□□ -1.2
SMG1-217ENST00000569764 TUBGCP6Q96RT7 1819 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 GSPT1P15170 499 aaKnown RBP7.58□□□□□ -1.2
SMG1-217ENST00000569764 MICALL2Q8IY33 904 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 CDHR1Q96JP9 859 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 EPAS1Q99814 870 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 CRNKL1Q9BZJ0 848 aaKnown RBP7.58□□□□□ -1.2
SMG1-217ENST00000569764 ZNF232Q9UNY5 417 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 MRPS23Q9Y3D9 190 aaKnown RBP7.58□□□□□ -1.2
SMG1-217ENST00000569764 SLC20A2Q08357 652 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 SNAPC2Q13487 334 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 SAMD14Q8IZD0 417 aaPredicted RBP7.58□□□□□ -1.2
SMG1-217ENST00000569764 KIF2CQ99661 725 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 DHX36Q9H2U1 1008 aaKnown RBP7.58□□□□□ -1.2
SMG1-217ENST00000569764 GPHNQ9NQX3 736 aaPredicted RBP7.58□□□□□ -1.2
SMG1-217ENST00000569764 POLG2Q9UHN1 485 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 TSKSQ9UJT2 592 aa7.58□□□□□ -1.2
SMG1-217ENST00000569764 HIP1O00291 1037 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 SRGNP10124 158 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 HCLS1P14317 486 aaPredicted RBP7.57□□□□□ -1.2
SMG1-217ENST00000569764 CD151P48509 253 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 GMPSP49915 693 aaPredicted RBP7.57□□□□□ -1.2
SMG1-217ENST00000569764 ZNF132P52740 706 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 FCGRTP55899 365 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 MFSD14CQ5VZR4 134 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 STK32AQ8WU08 396 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 ERCC4Q92889 916 aaPredicted RBP7.57□□□□□ -1.2
SMG1-217ENST00000569764 USP44Q9H0E7 712 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 PPP1R9AQ9ULJ8 1098 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 PKD1L3Q7Z443 1732 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 ATP5J2-PTCD1G3V325 749 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 BOLA2-SMG1P6H3BVE0 249 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 POLRMTO00411 1230 aaKnown RBP7.57□□□□□ -1.2
SMG1-217ENST00000569764 TRIM28Q13263 835 aaKnown RBP7.57□□□□□ -1.2
SMG1-217ENST00000569764 PDIA6Q15084 440 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 TBC1D9BQ66K14 1250 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 ZNF713Q8N859 430 aaPredicted RBP7.57□□□□□ -1.2
SMG1-217ENST00000569764 ADCY9O60503 1353 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 PALM3A6NDB9 673 aaPredicted RBP7.57□□□□□ -1.2
SMG1-217ENST00000569764 AKAP17AQ02040 695 aaKnown RBP7.57□□□□□ -1.2
SMG1-217ENST00000569764 ITPK1Q13572 414 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 STRIP1Q5VSL9 837 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 TSHZ3Q63HK5 1081 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 ATP6V1E2Q96A05 226 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 TMEM87BQ96K49 555 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 NMRK2Q9NPI5 230 aa7.57□□□□□ -1.2
SMG1-217ENST00000569764 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.57□□□□□ -1.2
SMG1-217ENST00000569764 FECHP22830 423 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 GRAMD1BQ3KR37 738 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 ANKRD44Q8N8A2 993 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 REPIN1Q9BWE0 567 aaKnown RBP7.56□□□□□ -1.2
SMG1-217ENST00000569764 PPP1R12CQ9BZL4 782 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 OSBPL2Q9H1P3 480 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 DCTPP1Q9H773 170 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 AVENQ9NQS1 362 aaPredicted RBP7.56□□□□□ -1.2
SMG1-217ENST00000569764 DIAPH3Q9NSV4 1193 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 UTP6Q9NYH9 597 aaKnown RBP7.56□□□□□ -1.2
SMG1-217ENST00000569764 FBXL5Q9UKA1 691 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 GTF2IP78347 998 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 TAF11Q15544 211 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 CDC37Q16543 378 aaPredicted RBP7.56□□□□□ -1.2
SMG1-217ENST00000569764 AGAP9Q5VTM2 703 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 ZFPM2Q8WW38 1151 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 UBAP1Q9NZ09 502 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 SPDYE2BA6NHP3 402 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 SPDYE5A6NIY4 337 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 TLR3O15455 904 aaKnown RBP7.56□□□□□ -1.2
SMG1-217ENST00000569764 ECE2O60344 883 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 LPXNO60711 386 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 DDNO94850 711 aaPredicted RBP7.56□□□□□ -1.2
SMG1-217ENST00000569764 SPDYE6P0CI01 402 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 RAD51AP2Q09MP3 1159 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 ATP2B3Q16720 1220 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 SPDYE2Q495Y8 402 aa7.56□□□□□ -1.2
SMG1-217ENST00000569764 ELMSAN1Q6PJG2 1045 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms