RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 MICU3Q86XE3 530 aa14.62□□□□□ -0.07
EDC3-217ENST00000569606 LRRC47Q8N1G4 583 aaKnown RBP14.62□□□□□ -0.07
EDC3-217ENST00000569606 NECAB1Q8N987 351 aa14.62□□□□□ -0.07
EDC3-217ENST00000569606 SMC1BQ8NDV3 1235 aa14.62□□□□□ -0.07
EDC3-217ENST00000569606 RBM46Q8TBY0 533 aaKnown RBP14.62□□□□□ -0.07
EDC3-217ENST00000569606 ACER1Q8TDN7 264 aa14.62□□□□□ -0.07
EDC3-217ENST00000569606 ARHGEF10LQ9HCE6 1279 aa14.62□□□□□ -0.07
EDC3-217ENST00000569606 GBA2Q9HCG7 927 aaPredicted RBP14.62□□□□□ -0.07
EDC3-217ENST00000569606 SYNPO2Q9UMS6 1093 aa14.62□□□□□ -0.07
EDC3-217ENST00000569606 TMX2Q9Y320 296 aa14.62□□□□□ -0.07
EDC3-217ENST00000569606 CSADQ9Y600 493 aa14.62□□□□□ -0.07
EDC3-217ENST00000569606 UNCXA6NJT0 531 aa14.61□□□□□ -0.07
EDC3-217ENST00000569606 UBE2Q2LH0YL09 131 aa14.61□□□□□ -0.07
EDC3-217ENST00000569606 CALM1P0DP23 149 aa14.61□□□□□ -0.07
EDC3-217ENST00000569606 CALM2P0DP24 149 aa14.61□□□□□ -0.07
EDC3-217ENST00000569606 CALM3P0DP25 149 aa14.61□□□□□ -0.07
EDC3-217ENST00000569606 METAP2P50579 478 aaKnown RBP eCLIP14.61□□□□□ -0.07
EDC3-217ENST00000569606 SCRN1Q12765 414 aa14.61□□□□□ -0.07
EDC3-217ENST00000569606 CUL4AQ13619 759 aa14.61□□□□□ -0.07
EDC3-217ENST00000569606 NUP133Q8WUM0 1156 aa14.61□□□□□ -0.07
EDC3-217ENST00000569606 GTF3C6Q969F1 213 aa14.61□□□□□ -0.07
EDC3-217ENST00000569606 CLMNQ96JQ2 1002 aa14.61□□□□□ -0.07
EDC3-217ENST00000569606 WDR18Q9BV38 432 aa14.61□□□□□ -0.07
EDC3-217ENST00000569606 SLKQ9H2G2 1235 aaPredicted RBP14.61□□□□□ -0.07
EDC3-217ENST00000569606 PTPRFP10586 1907 aa14.6□□□□□ -0.07
EDC3-217ENST00000569606 GOLGA8AA7E2F4 631 aa14.6□□□□□ -0.07
EDC3-217ENST00000569606 CDC27P30260 824 aa14.6□□□□□ -0.07
EDC3-217ENST00000569606 RASGRP2Q7LDG7 609 aa14.6□□□□□ -0.07
EDC3-217ENST00000569606 CCDC83Q8IWF9 413 aa14.6□□□□□ -0.07
EDC3-217ENST00000569606 CCDC144CPQ8IYA2 1237 aa14.6□□□□□ -0.07
EDC3-217ENST00000569606 C2orf69Q8N8R5 385 aa14.6□□□□□ -0.07
EDC3-217ENST00000569606 MAP3K14Q99558 947 aa14.6□□□□□ -0.07
EDC3-217ENST00000569606 AS3MTQ9HBK9 375 aa14.6□□□□□ -0.07
EDC3-217ENST00000569606 NCOA5Q9HCD5 579 aaKnown RBP14.6□□□□□ -0.07
EDC3-217ENST00000569606 FAM217BQ9NTX9 383 aaPredicted RBP14.6□□□□□ -0.07
EDC3-217ENST00000569606 F5H6K3 240 aa14.59□□□□□ -0.07
EDC3-217ENST00000569606 SNHG28P0DPA3 235 aa14.59□□□□□ -0.07
EDC3-217ENST00000569606 PDHBP11177 359 aa14.59□□□□□ -0.07
EDC3-217ENST00000569606 KLRC3Q07444 240 aa14.59□□□□□ -0.07
EDC3-217ENST00000569606 GRM4Q14833 912 aa14.59□□□□□ -0.07
EDC3-217ENST00000569606 RTN1Q16799 776 aa14.59□□□□□ -0.07
EDC3-217ENST00000569606 FANCBQ8NB91 859 aa14.59□□□□□ -0.07
EDC3-217ENST00000569606 ZNF280CQ8ND82 737 aa14.59□□□□□ -0.07
EDC3-217ENST00000569606 GMCL1P1Q8NEA9 526 aa14.59□□□□□ -0.07
EDC3-217ENST00000569606 KIAA1683Q9H0B3 1180 aa14.59□□□□□ -0.07
EDC3-217ENST00000569606 SH2D4AQ9H788 454 aa14.59□□□□□ -0.07
EDC3-217ENST00000569606 VCPKMTQ9H867 229 aa14.59□□□□□ -0.07
EDC3-217ENST00000569606 ELP3Q9H9T3 547 aa14.59□□□□□ -0.07
EDC3-217ENST00000569606 MTMR7Q9Y216 660 aa14.59□□□□□ -0.07
EDC3-217ENST00000569606 AFG3L2Q9Y4W6 797 aa14.59□□□□□ -0.07
EDC3-217ENST00000569606 ZHX2Q9Y6X8 837 aa14.59□□□□□ -0.07
EDC3-217ENST00000569606 SPDYE5A6NIY4 337 aa14.58□□□□□ -0.08
EDC3-217ENST00000569606 NDUFB10O96000 172 aa14.58□□□□□ -0.08
EDC3-217ENST00000569606 ADD1P35611 737 aaKnown RBP14.58□□□□□ -0.08
EDC3-217ENST00000569606 SLC4A3P48751 1232 aa14.58□□□□□ -0.08
EDC3-217ENST00000569606 PPATQ06203 517 aa14.58□□□□□ -0.08
EDC3-217ENST00000569606 SPP2Q13103 211 aa14.58□□□□□ -0.08
EDC3-217ENST00000569606 PPP2R5BQ15173 497 aa14.58□□□□□ -0.08
EDC3-217ENST00000569606 KIAA1755Q5JYT7 1200 aa14.58□□□□□ -0.08
EDC3-217ENST00000569606 SLFN13Q68D06 897 aa14.58□□□□□ -0.08
EDC3-217ENST00000569606 ERO1BQ86YB8 467 aa14.58□□□□□ -0.08
EDC3-217ENST00000569606 CTCFLQ8NI51 663 aaPredicted RBP14.58□□□□□ -0.08
EDC3-217ENST00000569606 CNKSR2Q8WXI2 1034 aa14.58□□□□□ -0.08
EDC3-217ENST00000569606 IPO9Q96P70 1041 aaKnown RBP14.58□□□□□ -0.08
EDC3-217ENST00000569606 FEZ1Q99689 392 aa14.58□□□□□ -0.08
EDC3-217ENST00000569606 GOPCQ9HD26 462 aa14.58□□□□□ -0.08
EDC3-217ENST00000569606 RBM28Q9NW13 759 aaKnown RBP14.58□□□□□ -0.08
EDC3-217ENST00000569606 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.58□□□□□ -0.08
EDC3-217ENST00000569606 MAD2L2Q9UI95 211 aa14.58□□□□□ -0.08
EDC3-217ENST00000569606 PALM3A6NDB9 673 aaPredicted RBP14.57□□□□□ -0.08
EDC3-217ENST00000569606 USP17L10C9JJH3 530 aa14.57□□□□□ -0.08
EDC3-217ENST00000569606 PARP1P09874 1014 aaKnown RBP14.57□□□□□ -0.08
EDC3-217ENST00000569606 KIF5BP33176 963 aa14.57□□□□□ -0.08
EDC3-217ENST00000569606 ZNF543Q08ER8 600 aa14.57□□□□□ -0.08
EDC3-217ENST00000569606 FSTL1Q12841 308 aa14.57□□□□□ -0.08
EDC3-217ENST00000569606 MTMR2Q13614 643 aa14.57□□□□□ -0.08
EDC3-217ENST00000569606 ZYXQ15942 572 aaKnown RBP14.57□□□□□ -0.08
EDC3-217ENST00000569606 ASPRV1Q53RT3 343 aa14.57□□□□□ -0.08
EDC3-217ENST00000569606 USP17L2Q6R6M4 530 aa14.57□□□□□ -0.08
EDC3-217ENST00000569606 STAG2Q8N3U4 1231 aa14.57□□□□□ -0.08
EDC3-217ENST00000569606 DCAF4Q8WV16 495 aa14.57□□□□□ -0.08
EDC3-217ENST00000569606 CHMP4CQ96CF2 233 aa14.57□□□□□ -0.08
EDC3-217ENST00000569606 SLC10A4Q96EP9 437 aa14.57□□□□□ -0.08
EDC3-217ENST00000569606 INTS4Q96HW7 963 aaKnown RBP14.57□□□□□ -0.08
EDC3-217ENST00000569606 EMILIN3Q9NT22 766 aa14.57□□□□□ -0.08
EDC3-217ENST00000569606 LOC285556D6RIA3 1793 aa14.56□□□□□ -0.08
EDC3-217ENST00000569606 CCDC196A0A1B0GTZ2 297 aa14.56□□□□□ -0.08
EDC3-217ENST00000569606 TRIM75PA6NK02 468 aa14.56□□□□□ -0.08
EDC3-217ENST00000569606 RAD21O60216 631 aa14.56□□□□□ -0.08
EDC3-217ENST00000569606 DHX16O60231 1041 aaKnown RBP14.56□□□□□ -0.08
EDC3-217ENST00000569606 CTDNEP1O95476 244 aa14.56□□□□□ -0.08
EDC3-217ENST00000569606 BACE1P56817 501 aa14.56□□□□□ -0.08
EDC3-217ENST00000569606 NTRK3Q16288 839 aa14.56□□□□□ -0.08
EDC3-217ENST00000569606 TMTC3Q6ZXV5 915 aa14.56□□□□□ -0.08
EDC3-217ENST00000569606 NSUN7Q8NE18 718 aaKnown RBP14.56□□□□□ -0.08
EDC3-217ENST00000569606 OPTNQ96CV9 577 aa14.56□□□□□ -0.08
EDC3-217ENST00000569606 OTUD5Q96G74 571 aa14.56□□□□□ -0.08
EDC3-217ENST00000569606 GMCL1Q96IK5 515 aa14.56□□□□□ -0.08
EDC3-217ENST00000569606 LLPHQ9BRT6 129 aaKnown RBP14.56□□□□□ -0.08
EDC3-217ENST00000569606 FRMPD2Q68DX3 1309 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms