RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 LY9Q9HBG7 655 aa27.49■■□□□ 1.99
RAB40C-212ENST00000569575 MYH4Q9Y623 1939 aa27.49■■□□□ 1.99
RAB40C-212ENST00000569575 CCDC69A6NI79 296 aa27.48■■□□□ 1.99
RAB40C-212ENST00000569575 C1QTNF8P60827 252 aa27.48■■□□□ 1.99
RAB40C-212ENST00000569575 DEFB115Q30KQ5 88 aa27.48■■□□□ 1.99
RAB40C-212ENST00000569575 SYNE3Q6ZMZ3 975 aa27.48■■□□□ 1.99
RAB40C-212ENST00000569575 Q6ZUG5 572 aa27.48■■□□□ 1.99
RAB40C-212ENST00000569575 FASTKD5Q7L8L6 764 aaKnown RBP27.48■■□□□ 1.99
RAB40C-212ENST00000569575 CHST3Q7LGC8 479 aa27.48■■□□□ 1.99
RAB40C-212ENST00000569575 NKX2-3Q8TAU0 364 aa27.48■■□□□ 1.99
RAB40C-212ENST00000569575 FEZ1Q99689 392 aa27.48■■□□□ 1.99
RAB40C-212ENST00000569575 IRF6O14896 467 aa27.47■■□□□ 1.99
RAB40C-212ENST00000569575 SLC10A3P09131 477 aa27.47■■□□□ 1.99
RAB40C-212ENST00000569575 ATP2B2Q01814 1243 aa27.47■■□□□ 1.99
RAB40C-212ENST00000569575 SHROOM1Q2M3G4 852 aaPredicted RBP27.47■■□□□ 1.99
RAB40C-212ENST00000569575 CATIPQ7Z7H3 387 aa27.47■■□□□ 1.99
RAB40C-212ENST00000569575 PROCA1Q8NCQ7 364 aaPredicted RBP27.47■■□□□ 1.99
RAB40C-212ENST00000569575 CHMP4CQ96CF2 233 aa27.47■■□□□ 1.99
RAB40C-212ENST00000569575 VCPKMTQ9H867 229 aa27.47■■□□□ 1.99
RAB40C-212ENST00000569575 TMOD4Q9NZQ9 345 aa27.47■■□□□ 1.99
RAB40C-212ENST00000569575 DDAH1O94760 285 aa27.46■■□□□ 1.99
RAB40C-212ENST00000569575 CETPP11597 493 aa27.46■■□□□ 1.99
RAB40C-212ENST00000569575 NFXL1Q6ZNB6 911 aa27.46■■□□□ 1.99
RAB40C-212ENST00000569575 RASAL3Q86YV0 1011 aa27.46■■□□□ 1.99
RAB40C-212ENST00000569575 PNMA1Q8ND90 353 aa27.46■■□□□ 1.99
RAB40C-212ENST00000569575 SLC12A7Q9Y666 1083 aa27.46■■□□□ 1.99
RAB40C-212ENST00000569575 A0A0G2JLL6 359 aaPredicted RBP27.45■■□□□ 1.98
RAB40C-212ENST00000569575 A0A1W2PRG0 241 aa27.45■■□□□ 1.98
RAB40C-212ENST00000569575 MANSC4A6NHS7 340 aaPredicted RBP27.45■■□□□ 1.98
RAB40C-212ENST00000569575 PRRT2Q7Z6L0 340 aaPredicted RBP27.45■■□□□ 1.98
RAB40C-212ENST00000569575 GMCL1Q96IK5 515 aa27.45■■□□□ 1.98
RAB40C-212ENST00000569575 TRIM75PA6NK02 468 aa27.44■■□□□ 1.98
RAB40C-212ENST00000569575 F5H6K3 240 aa27.44■■□□□ 1.98
RAB40C-212ENST00000569575 HSPA6P17066 643 aa27.44■■□□□ 1.98
RAB40C-212ENST00000569575 KLRC3Q07444 240 aa27.44■■□□□ 1.98
RAB40C-212ENST00000569575 NOGQ13253 232 aa27.44■■□□□ 1.98
RAB40C-212ENST00000569575 ACER1Q8TDN7 264 aa27.44■■□□□ 1.98
RAB40C-212ENST00000569575 DCAF4Q8WV16 495 aa27.44■■□□□ 1.98
RAB40C-212ENST00000569575 ZNF274Q96GC6 653 aaPredicted RBP27.44■■□□□ 1.98
RAB40C-212ENST00000569575 CPA1P15085 419 aa27.43■■□□□ 1.98
RAB40C-212ENST00000569575 MTMR2Q13614 643 aa27.43■■□□□ 1.98
RAB40C-212ENST00000569575 BRF1Q92994 677 aa27.43■■□□□ 1.98
RAB40C-212ENST00000569575 TESPA1A2RU30 521 aaPredicted RBP27.42■■□□□ 1.98
RAB40C-212ENST00000569575 WDR46O15213 610 aaKnown RBP27.42■■□□□ 1.98
RAB40C-212ENST00000569575 SNHG28P0DPA3 235 aa27.42■■□□□ 1.98
RAB40C-212ENST00000569575 PABPC4Q13310 644 aaKnown RBP eCLIP27.42■■□□□ 1.98
RAB40C-212ENST00000569575 TOB2Q14106 344 aaPredicted RBP27.42■■□□□ 1.98
RAB40C-212ENST00000569575 GPATCH4Q5T3I0 446 aaKnown RBP27.42■■□□□ 1.98
RAB40C-212ENST00000569575 ZNF654Q8IZM8 581 aa27.42■■□□□ 1.98
RAB40C-212ENST00000569575 ZCCHC17Q9NP64 241 aaKnown RBP27.42■■□□□ 1.98
RAB40C-212ENST00000569575 SLC45A1Q9Y2W3 748 aa27.42■■□□□ 1.98
RAB40C-212ENST00000569575 CCDC196A0A1B0GTZ2 297 aa27.41■■□□□ 1.98
RAB40C-212ENST00000569575 FAM155AB1AL88 458 aaPredicted RBP27.41■■□□□ 1.98
RAB40C-212ENST00000569575 KIF5BP33176 963 aa27.41■■□□□ 1.98
RAB40C-212ENST00000569575 SREBF2Q12772 1141 aa27.41■■□□□ 1.98
RAB40C-212ENST00000569575 TROAPQ12815 778 aa27.41■■□□□ 1.98
RAB40C-212ENST00000569575 COL9A3Q14050 684 aaPredicted RBP27.41■■□□□ 1.98
RAB40C-212ENST00000569575 SLFN13Q68D06 897 aa27.41■■□□□ 1.98
RAB40C-212ENST00000569575 APOA5Q6Q788 366 aa27.41■■□□□ 1.98
RAB40C-212ENST00000569575 CLEC10AQ8IUN9 316 aa27.41■■□□□ 1.98
RAB40C-212ENST00000569575 MS4A4AQ96JQ5 239 aa27.41■■□□□ 1.98
RAB40C-212ENST00000569575 ZSCAN31Q96LW9 406 aaPredicted RBP27.41■■□□□ 1.98
RAB40C-212ENST00000569575 TCEANC2Q96MN5 208 aa27.41■■□□□ 1.98
RAB40C-212ENST00000569575 LRRC2Q9BYS8 371 aa27.41■■□□□ 1.98
RAB40C-212ENST00000569575 EMILIN3Q9NT22 766 aa27.41■■□□□ 1.98
RAB40C-212ENST00000569575 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.41■■□□□ 1.98
RAB40C-212ENST00000569575 PTPRFP10586 1907 aa27.41■■□□□ 1.98
RAB40C-212ENST00000569575 PLA2G6O60733 806 aa27.4■■□□□ 1.98
RAB40C-212ENST00000569575 GJA5P36382 358 aa27.4■■□□□ 1.98
RAB40C-212ENST00000569575 GNAQP50148 359 aa27.4■■□□□ 1.98
RAB40C-212ENST00000569575 AK2P54819 239 aa27.4■■□□□ 1.98
RAB40C-212ENST00000569575 ASPRV1Q53RT3 343 aa27.4■■□□□ 1.98
RAB40C-212ENST00000569575 CCDC84Q86UT8 332 aaPredicted RBP27.4■■□□□ 1.98
RAB40C-212ENST00000569575 LRRC47Q8N1G4 583 aaKnown RBP27.4■■□□□ 1.98
RAB40C-212ENST00000569575 CNKSR2Q8WXI2 1034 aa27.4■■□□□ 1.98
RAB40C-212ENST00000569575 ZBTB43O43298 467 aa27.39■■□□□ 1.98
RAB40C-212ENST00000569575 NDUFB10O96000 172 aa27.39■■□□□ 1.98
RAB40C-212ENST00000569575 SMARCA1P28370 1054 aa27.39■■□□□ 1.98
RAB40C-212ENST00000569575 HOXA7P31268 230 aaPredicted RBP27.39■■□□□ 1.98
RAB40C-212ENST00000569575 MAP2K2P36507 400 aa27.39■■□□□ 1.98
RAB40C-212ENST00000569575 SLC1A4P43007 532 aa27.39■■□□□ 1.98
RAB40C-212ENST00000569575 HMGCS2P54868 508 aa27.39■■□□□ 1.98
RAB40C-212ENST00000569575 LZTS2Q9BRK4 669 aa27.39■■□□□ 1.98
RAB40C-212ENST00000569575 RBM28Q9NW13 759 aaKnown RBP27.39■■□□□ 1.98
RAB40C-212ENST00000569575 LIMCH1Q9UPQ0 1083 aa27.39■■□□□ 1.98
RAB40C-212ENST00000569575 KLF18A0A0U1RQI7 1052 aa27.38■■□□□ 1.97
RAB40C-212ENST00000569575 PDHBP11177 359 aa27.38■■□□□ 1.97
RAB40C-212ENST00000569575 OTUD7BQ6GQQ9 843 aa27.38■■□□□ 1.97
RAB40C-212ENST00000569575 CTCFLQ8NI51 663 aaPredicted RBP27.38■■□□□ 1.97
RAB40C-212ENST00000569575 AGTPBP1Q9UPW5 1226 aa27.38■■□□□ 1.97
RAB40C-212ENST00000569575 NID2Q14112 1375 aa27.37■■□□□ 1.97
RAB40C-212ENST00000569575 DHX16O60231 1041 aaKnown RBP27.37■■□□□ 1.97
RAB40C-212ENST00000569575 PARP1P09874 1014 aaKnown RBP27.37■■□□□ 1.97
RAB40C-212ENST00000569575 BMP3P12645 472 aa27.37■■□□□ 1.97
RAB40C-212ENST00000569575 ANKRD23Q86SG2 305 aa27.37■■□□□ 1.97
RAB40C-212ENST00000569575 CAPNS2Q96L46 248 aa27.37■■□□□ 1.97
RAB40C-212ENST00000569575 GPHNQ9NQX3 736 aaPredicted RBP27.37■■□□□ 1.97
RAB40C-212ENST00000569575 SH2B1Q9NRF2 756 aaPredicted RBP27.37■■□□□ 1.97
RAB40C-212ENST00000569575 LOC285556D6RIA3 1793 aa27.37■■□□□ 1.97
RAB40C-212ENST00000569575 MYPNQ86TC9 1320 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms