RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 SUGT1Q9Y2Z0 365 aa6.58□□□□□ -1.36
CDH13-213ENST00000569454 CLIC4Q9Y696 253 aa6.58□□□□□ -1.36
CDH13-213ENST00000569454 C10orf71Q711Q0 1435 aa6.58□□□□□ -1.36
CDH13-213ENST00000569454 MROH7-TTC4A0A0A0MT08 1334 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 WDR90Q96KV7 1748 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.57□□□□□ -1.36
CDH13-213ENST00000569454 A0A1B0GVL5 298 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 TRIM75PA6NK02 468 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 TSPY2A6NKD2 308 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 USP17L12C9JPN9 530 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 USP17L21D6R901 530 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 RXRAP19793 462 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 PTPREP23469 700 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 NLRP12P59046 1061 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 TROAPQ12815 778 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 OTUD7BQ6GQQ9 843 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 GALNT17Q6IS24 598 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 PRR5LQ6MZQ0 368 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 RAB11FIP4Q86YS3 637 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 DRC7Q8IY82 874 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 CCDC144CPQ8IYA2 1237 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 FLAD1Q8NFF5 587 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 CCDC148Q8NFR7 591 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 ZNF526Q8TF50 670 aaPredicted RBP6.57□□□□□ -1.36
CDH13-213ENST00000569454 NUP133Q8WUM0 1156 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 ANKS1AQ92625 1134 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 SYT17Q9BSW7 474 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 MYL10Q9BUA6 226 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 PRDM10Q9NQV6 1147 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 SH3GLB2Q9NR46 395 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 TCP11L1Q9NUJ3 509 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 IMPACTQ9P2X3 320 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 CLIP2Q9UDT6 1046 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 TUBE1Q9UJT0 475 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 GGA1Q9UJY5 639 aa6.57□□□□□ -1.36
CDH13-213ENST00000569454 CNTNAP5Q8WYK1 1306 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 NAV1Q8NEY1 1877 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 KLRG2A4D1S0 409 aaPredicted RBP6.56□□□□□ -1.36
CDH13-213ENST00000569454 CBFA2T2O43439 604 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 GYS1P13807 737 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 HOXB1P14653 301 aaPredicted RBP6.56□□□□□ -1.36
CDH13-213ENST00000569454 IL1R1P14778 569 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 PRDX5P30044 214 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 USP5P45974 858 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 DYNLL1P63167 89 aaKnown RBP6.56□□□□□ -1.36
CDH13-213ENST00000569454 FUT2Q10981 343 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 SEMA3FQ13275 785 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 PPP4R3BQ5MIZ7 849 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 C12orf60Q5U649 245 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 OLFM4Q6UX06 510 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 C11orf57Q6ZUT1 292 aaPredicted RBP6.56□□□□□ -1.36
CDH13-213ENST00000569454 CCDC150Q8NCX0 1101 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 CNNM3Q8NE01 707 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 KIAA1524Q8TCG1 905 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 ZNF384Q8TF68 577 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 AIFM3Q96NN9 605 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 ZKSCAN3Q9BRR0 538 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 PHF20Q9BVI0 1012 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 KAT14Q9H8E8 782 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 SENP2Q9HC62 589 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 MCM9Q9NXL9 1143 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 AATFQ9NY61 560 aaKnown RBP eCLIP6.56□□□□□ -1.36
CDH13-213ENST00000569454 TFCP2L1Q9NZI6 479 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 KCNH3Q9ULD8 1083 aa6.56□□□□□ -1.36
CDH13-213ENST00000569454 SRPRBQ9Y5M8 271 aaKnown RBP6.56□□□□□ -1.36
CDH13-213ENST00000569454 FAM205AQ6ZU69 1335 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 MYO3BQ8WXR4 1341 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 BTBD18B2RXH4 712 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 hCG_1984214I3L0E3 225 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 PPFIA3O75145 1194 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 WDHD1O75717 1129 aaPredicted RBP6.55□□□□□ -1.36
CDH13-213ENST00000569454 ECM2O94769 699 aaPredicted RBP6.55□□□□□ -1.36
CDH13-213ENST00000569454 UFL1O94874 794 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 SMC2O95347 1197 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 SERPINB2P05120 415 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 SCG2P13521 617 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 KLRK1P26718 216 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 SMARCA1P28370 1054 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 PTGER2P43116 358 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 KCNJ6P48051 423 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 KCNQ4P56696 695 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 MYL5Q02045 173 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 ORC2Q13416 577 aaPredicted RBP6.55□□□□□ -1.36
CDH13-213ENST00000569454 NOLC1Q14978 699 aaKnown RBP eCLIP6.55□□□□□ -1.36
CDH13-213ENST00000569454 GPR162Q16538 588 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 PFKFB3Q16875 520 aaPredicted RBP6.55□□□□□ -1.36
CDH13-213ENST00000569454 HABP4Q5JVS0 413 aaKnown RBP6.55□□□□□ -1.36
CDH13-213ENST00000569454 DNTTIP2Q5QJE6 756 aaKnown RBP6.55□□□□□ -1.36
CDH13-213ENST00000569454 NT5DC1Q5TFE4 455 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 SHC4Q6S5L8 630 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 KRBA2Q6ZNG9 492 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 PTF1AQ7RTS3 328 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 KRT27Q7Z3Y8 459 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 MTERF4Q7Z6M4 381 aaKnown RBP6.55□□□□□ -1.36
CDH13-213ENST00000569454 DHX40Q8IX18 779 aaKnown RBP6.55□□□□□ -1.36
CDH13-213ENST00000569454 DHX37Q8IY37 1157 aaKnown RBP6.55□□□□□ -1.36
CDH13-213ENST00000569454 NLGN1Q8N2Q7 840 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 AOPEPQ8N6M6 819 aa6.55□□□□□ -1.36
CDH13-213ENST00000569454 ZNF713Q8N859 430 aaPredicted RBP6.55□□□□□ -1.36
CDH13-213ENST00000569454 CCDC12Q8WUD4 166 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms