RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 ZSWIM5Q9P217 1185 aa15.37■□□□□ 0.05
CNOT1-217ENST00000569263 CEP350Q5VT06 3117 aa15.37■□□□□ 0.05
CNOT1-217ENST00000569263 PDHXO00330 501 aa15.36■□□□□ 0.05
CNOT1-217ENST00000569263 VCAM1P19320 739 aa15.36■□□□□ 0.05
CNOT1-217ENST00000569263 GPAT2Q6NUI2 795 aa15.36■□□□□ 0.05
CNOT1-217ENST00000569263 CYB5R4Q7L1T6 521 aa15.36■□□□□ 0.05
CNOT1-217ENST00000569263 MB21D2Q8IYB1 491 aaPredicted RBP15.36■□□□□ 0.05
CNOT1-217ENST00000569263 RASEFQ8IZ41 740 aa15.36■□□□□ 0.05
CNOT1-217ENST00000569263 NKX2-3Q8TAU0 364 aa15.36■□□□□ 0.05
CNOT1-217ENST00000569263 NEK1Q96PY6 1258 aa15.36■□□□□ 0.05
CNOT1-217ENST00000569263 WBP1LQ9NX94 342 aa15.36■□□□□ 0.05
CNOT1-217ENST00000569263 RNF186Q9NXI6 227 aa15.36■□□□□ 0.05
CNOT1-217ENST00000569263 PNMA3Q9UL41 463 aa15.36■□□□□ 0.05
CNOT1-217ENST00000569263 SYNPO2Q9UMS6 1093 aa15.36■□□□□ 0.05
CNOT1-217ENST00000569263 TNKSO95271 1327 aa15.36■□□□□ 0.05
CNOT1-217ENST00000569263 WDR46O15213 610 aaKnown RBP15.35■□□□□ 0.05
CNOT1-217ENST00000569263 CA12O43570 354 aa15.35■□□□□ 0.05
CNOT1-217ENST00000569263 TRPA1O75762 1119 aa15.35■□□□□ 0.05
CNOT1-217ENST00000569263 TOP1P11387 765 aaKnown RBP15.35■□□□□ 0.05
CNOT1-217ENST00000569263 OSBPP22059 807 aa15.35■□□□□ 0.05
CNOT1-217ENST00000569263 MCM5P33992 734 aa15.35■□□□□ 0.05
CNOT1-217ENST00000569263 IRX3P78415 501 aaPredicted RBP15.35■□□□□ 0.05
CNOT1-217ENST00000569263 TSGA10IPQ3SY00 556 aa15.35■□□□□ 0.05
CNOT1-217ENST00000569263 SPICE1Q8N0Z3 855 aa15.35■□□□□ 0.05
CNOT1-217ENST00000569263 MKL1Q969V6 931 aa15.35■□□□□ 0.05
CNOT1-217ENST00000569263 TTC14Q96N46 770 aa15.35■□□□□ 0.05
CNOT1-217ENST00000569263 PARK7Q99497 189 aaKnown RBP15.35■□□□□ 0.05
CNOT1-217ENST00000569263 TANGO6Q9C0B7 1094 aa15.35■□□□□ 0.05
CNOT1-217ENST00000569263 ZFYVE28Q9HCC9 887 aa15.35■□□□□ 0.05
CNOT1-217ENST00000569263 SAGE1Q9NXZ1 904 aa15.35■□□□□ 0.05
CNOT1-217ENST00000569263 ISY1Q9ULR0 285 aaKnown RBP15.35■□□□□ 0.05
CNOT1-217ENST00000569263 SLC45A1Q9Y2W3 748 aa15.35■□□□□ 0.05
CNOT1-217ENST00000569263 SNX14Q9Y5W7 946 aa15.35■□□□□ 0.05
CNOT1-217ENST00000569263 PARP14Q460N5 1801 aa15.34■□□□□ 0.05
CNOT1-217ENST00000569263 F5H6K3 240 aa15.34■□□□□ 0.05
CNOT1-217ENST00000569263 IFIT3O14879 490 aaKnown RBP15.34■□□□□ 0.05
CNOT1-217ENST00000569263 PRC1O43663 620 aa15.34■□□□□ 0.05
CNOT1-217ENST00000569263 HSPA1AP0DMV8 641 aaKnown RBP15.34■□□□□ 0.05
CNOT1-217ENST00000569263 HSPA1BP0DMV9 641 aaKnown RBP15.34■□□□□ 0.05
CNOT1-217ENST00000569263 KLRC3Q07444 240 aa15.34■□□□□ 0.05
CNOT1-217ENST00000569263 IFIT1BQ5T764 474 aaKnown RBP15.34■□□□□ 0.05
CNOT1-217ENST00000569263 CHST3Q7LGC8 479 aa15.34■□□□□ 0.05
CNOT1-217ENST00000569263 DGKHQ86XP1 1220 aa15.34■□□□□ 0.05
CNOT1-217ENST00000569263 ENAHQ8N8S7 591 aaPredicted RBP15.34■□□□□ 0.05
CNOT1-217ENST00000569263 GMCL1P1Q8NEA9 526 aa15.34■□□□□ 0.05
CNOT1-217ENST00000569263 SMCR8Q8TEV9 937 aaPredicted RBP15.34■□□□□ 0.05
CNOT1-217ENST00000569263 KCNB2Q92953 911 aa15.34■□□□□ 0.05
CNOT1-217ENST00000569263 JAKMIP1Q96N16 626 aaKnown RBP15.34■□□□□ 0.05
CNOT1-217ENST00000569263 TMEM47Q9BQJ4 181 aa15.34■□□□□ 0.05
CNOT1-217ENST00000569263 RPAP3Q9H6T3 665 aaPredicted RBP15.34■□□□□ 0.05
CNOT1-217ENST00000569263 KAT14Q9H8E8 782 aa15.34■□□□□ 0.05
CNOT1-217ENST00000569263 MTMR7Q9Y216 660 aa15.34■□□□□ 0.05
CNOT1-217ENST00000569263 USP17L15C9J2P7 530 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 USP17L13C9JLJ4 530 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 USP17L11C9JVI0 530 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 USP17L18D6R9N7 530 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 USP17L22D6RA61 530 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 USP17L17D6RBQ6 530 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 USP17L19D6RCP7 530 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 USP17L20D6RJB6 530 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 SEC24BO95487 1268 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 NDUFB10O96000 172 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 HMGB1P09429 215 aaKnown RBP15.33■□□□□ 0.04
CNOT1-217ENST00000569263 PSMA5P28066 241 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 HOXA7P31268 230 aaPredicted RBP15.33■□□□□ 0.04
CNOT1-217ENST00000569263 NOVP48745 357 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 USP17L24Q0WX57 530 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 CRHR2Q13324 411 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 WTAPQ15007 396 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 ADCK5Q3MIX3 580 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 TMEM67Q5HYA8 995 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 KIAA1755Q5JYT7 1200 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 SLFN13Q68D06 897 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 RCSD1Q6JBY9 416 aa15.33■□□□□ 0.04
CNOT1-217ENST00000569263 UPF2Q9HAU5 1272 aaKnown RBP15.33■□□□□ 0.04
CNOT1-217ENST00000569263 TBC1D8O95759 1140 aa15.32■□□□□ 0.04
CNOT1-217ENST00000569263 CYP2C8P10632 490 aa15.32■□□□□ 0.04
CNOT1-217ENST00000569263 ANTXR2P58335 489 aa15.32■□□□□ 0.04
CNOT1-217ENST00000569263 FAM83BQ5T0W9 1011 aa15.32■□□□□ 0.04
CNOT1-217ENST00000569263 BLOC1S2Q6QNY1 142 aa15.32■□□□□ 0.04
CNOT1-217ENST00000569263 TMEM87BQ96K49 555 aa15.32■□□□□ 0.04
CNOT1-217ENST00000569263 NUP88Q99567 741 aaPredicted RBP15.32■□□□□ 0.04
CNOT1-217ENST00000569263 ASCC2Q9H1I8 757 aaPredicted RBP15.32■□□□□ 0.04
CNOT1-217ENST00000569263 TSKSQ9UJT2 592 aa15.32■□□□□ 0.04
CNOT1-217ENST00000569263 CASTP20810 708 aaKnown RBP15.31■□□□□ 0.04
CNOT1-217ENST00000569263 SEC23AQ15436 765 aa15.31■□□□□ 0.04
CNOT1-217ENST00000569263 CCDC96Q2M329 555 aa15.31■□□□□ 0.04
CNOT1-217ENST00000569263 SAMD1Q6SPF0 538 aaPredicted RBP15.31■□□□□ 0.04
CNOT1-217ENST00000569263 CATSPERGQ6ZRH7 1159 aa15.31■□□□□ 0.04
CNOT1-217ENST00000569263 DHX32Q7L7V1 743 aaKnown RBP15.31■□□□□ 0.04
CNOT1-217ENST00000569263 PNMA1Q8ND90 353 aa15.31■□□□□ 0.04
CNOT1-217ENST00000569263 DCAF4Q8WV16 495 aa15.31■□□□□ 0.04
CNOT1-217ENST00000569263 ANKS1AQ92625 1134 aa15.31■□□□□ 0.04
CNOT1-217ENST00000569263 CHMP4CQ96CF2 233 aa15.31■□□□□ 0.04
CNOT1-217ENST00000569263 GMCL1Q96IK5 515 aa15.31■□□□□ 0.04
CNOT1-217ENST00000569263 MTA3Q9BTC8 594 aa15.31■□□□□ 0.04
CNOT1-217ENST00000569263 CFHR5Q9BXR6 569 aa15.31■□□□□ 0.04
CNOT1-217ENST00000569263 WDR19Q8NEZ3 1342 aa15.31■□□□□ 0.04
CNOT1-217ENST00000569263 A0A0G2JMZ2 1700 aa15.3■□□□□ 0.04
CNOT1-217ENST00000569263 FOXN1O15353 648 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms