RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 JMYQ8N9B5 988 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 GMCL1P1Q8NEA9 526 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 EMILIN3Q9NT22 766 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 SNX14Q9Y5W7 946 aa10.72□□□□□ -0.69
CHD9-219ENST00000569225 TNKSO95271 1327 aa10.71□□□□□ -0.69
CHD9-219ENST00000569225 WDR19Q8NEZ3 1342 aa10.71□□□□□ -0.69
CHD9-219ENST00000569225 BTBD19C9JJ37 291 aa10.71□□□□□ -0.69
CHD9-219ENST00000569225 PDHXO00330 501 aa10.71□□□□□ -0.69
CHD9-219ENST00000569225 IGF2BP3O00425 579 aaKnown RBP eCLIP10.71□□□□□ -0.69
CHD9-219ENST00000569225 IFIT3O14879 490 aaKnown RBP10.71□□□□□ -0.69
CHD9-219ENST00000569225 PRC1O43663 620 aa10.71□□□□□ -0.69
CHD9-219ENST00000569225 OSBPP22059 807 aa10.71□□□□□ -0.69
CHD9-219ENST00000569225 NOVP48745 357 aa10.71□□□□□ -0.69
CHD9-219ENST00000569225 MOGSQ13724 837 aa10.71□□□□□ -0.69
CHD9-219ENST00000569225 LRRC47Q8N1G4 583 aaKnown RBP10.71□□□□□ -0.69
CHD9-219ENST00000569225 TMEM87BQ96K49 555 aa10.71□□□□□ -0.69
CHD9-219ENST00000569225 JAKMIP1Q96N16 626 aaKnown RBP10.71□□□□□ -0.69
CHD9-219ENST00000569225 PARK7Q99497 189 aaKnown RBP10.71□□□□□ -0.69
CHD9-219ENST00000569225 PTPN18Q99952 460 aa10.71□□□□□ -0.69
CHD9-219ENST00000569225 ZKSCAN3Q9BRR0 538 aa10.71□□□□□ -0.69
CHD9-219ENST00000569225 KAT14Q9H8E8 782 aa10.71□□□□□ -0.69
CHD9-219ENST00000569225 SAGE1Q9NXZ1 904 aa10.71□□□□□ -0.69
CHD9-219ENST00000569225 THSD7BQ9C0I4 1608 aa10.71□□□□□ -0.7
CHD9-219ENST00000569225 USP17L15C9J2P7 530 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 USP17L13C9JLJ4 530 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 USP17L11C9JVI0 530 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 USP17L18D6R9N7 530 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 USP17L22D6RA61 530 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 USP17L17D6RBQ6 530 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 USP17L19D6RCP7 530 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 USP17L20D6RJB6 530 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 F5H6K3 240 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 WDR46O15213 610 aaKnown RBP10.7□□□□□ -0.7
CHD9-219ENST00000569225 VCAM1P19320 739 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 IRX3P78415 501 aaPredicted RBP10.7□□□□□ -0.7
CHD9-219ENST00000569225 KLRC3Q07444 240 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 USP17L24Q0WX57 530 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 TMEM67Q5HYA8 995 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 IFIT1BQ5T764 474 aaKnown RBP10.7□□□□□ -0.7
CHD9-219ENST00000569225 GPAT2Q6NUI2 795 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 BLOC1S2Q6QNY1 142 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 CYB5R4Q7L1T6 521 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 DHX32Q7L7V1 743 aaKnown RBP10.7□□□□□ -0.7
CHD9-219ENST00000569225 FAM43AQ8N2R8 423 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 ENAHQ8N8S7 591 aaPredicted RBP10.7□□□□□ -0.7
CHD9-219ENST00000569225 ANKS1AQ92625 1134 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 TMEM47Q9BQJ4 181 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 ZFYVE28Q9HCC9 887 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 SEC24BO95487 1268 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 NDUFB10O96000 172 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 HOXA7P31268 230 aaPredicted RBP10.7□□□□□ -0.7
CHD9-219ENST00000569225 FGD1P98174 961 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 WTAPQ15007 396 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 TAF1CQ15572 869 aaPredicted RBP10.7□□□□□ -0.7
CHD9-219ENST00000569225 TREML2Q5T2D2 321 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 SLFN13Q68D06 897 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 SPICE1Q8N0Z3 855 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 TMTC2Q8N394 836 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 GMCL1Q96IK5 515 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 TANGO6Q9C0B7 1094 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 RPAP3Q9H6T3 665 aaPredicted RBP10.7□□□□□ -0.7
CHD9-219ENST00000569225 WBP1LQ9NX94 342 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 RNF186Q9NXI6 227 aa10.7□□□□□ -0.7
CHD9-219ENST00000569225 SLC1A4P43007 532 aa10.69□□□□□ -0.7
CHD9-219ENST00000569225 ANTXR2P58335 489 aa10.69□□□□□ -0.7
CHD9-219ENST00000569225 RCSD1Q6JBY9 416 aa10.69□□□□□ -0.7
CHD9-219ENST00000569225 CHST3Q7LGC8 479 aa10.69□□□□□ -0.7
CHD9-219ENST00000569225 SMCR8Q8TEV9 937 aaPredicted RBP10.69□□□□□ -0.7
CHD9-219ENST00000569225 GTF3C2Q8WUA4 911 aaPredicted RBP10.69□□□□□ -0.7
CHD9-219ENST00000569225 DCAF4Q8WV16 495 aa10.69□□□□□ -0.7
CHD9-219ENST00000569225 TM6SF1Q9BZW5 370 aa10.69□□□□□ -0.7
CHD9-219ENST00000569225 DAXXQ9UER7 740 aaPredicted RBP10.69□□□□□ -0.7
CHD9-219ENST00000569225 ISY1Q9ULR0 285 aaKnown RBP10.69□□□□□ -0.7
CHD9-219ENST00000569225 ATAD5Q96QE3 1844 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 TRPA1O75762 1119 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 CASTP20810 708 aaKnown RBP10.68□□□□□ -0.7
CHD9-219ENST00000569225 DGKZQ13574 1117 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 SEC23AQ15436 765 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 ADCK5Q3MIX3 580 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 NFXL1Q6ZNB6 911 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 CATIPQ7Z7H3 387 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 PNMA1Q8ND90 353 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 NKX2-3Q8TAU0 364 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 CFHR5Q9BXR6 569 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 CYP46A1Q9Y6A2 500 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 SH2B2O14492 632 aaPredicted RBP10.68□□□□□ -0.7
CHD9-219ENST00000569225 BMP3P12645 472 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 RPS6KB1P23443 525 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 LIFRP42702 1097 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 GCLCP48506 637 aaPredicted RBP10.68□□□□□ -0.7
CHD9-219ENST00000569225 CCDC96Q2M329 555 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 FAM83BQ5T0W9 1011 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 CATSPERGQ6ZRH7 1159 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 IGDCC4Q8TDY8 1250 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 C22orf23Q9BZE7 217 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 ASCC2Q9H1I8 757 aaPredicted RBP10.68□□□□□ -0.7
CHD9-219ENST00000569225 ZSWIM6Q9HCJ5 1215 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 HOXC10Q9NYD6 342 aa10.68□□□□□ -0.7
CHD9-219ENST00000569225 MYH8P13535 1937 aa10.67□□□□□ -0.7
CHD9-219ENST00000569225 GREB1LQ9C091 1923 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms