RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 ANKRD1Q15327 319 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 ZYXQ15942 572 aaKnown RBP9□□□□□ -0.97
SCAPER-221ENST00000568549 SGMS1Q86VZ5 419 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 RASAL3Q86YV0 1011 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 SIAH1Q8IUQ4 282 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 FBXL16Q8N461 479 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 PNMA1Q8ND90 353 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 IL27Q8NEV9 243 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 ACER1Q8TDN7 264 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 BRF1Q92994 677 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 MKL1Q969V6 931 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 WNK4Q96J92 1243 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 AGXT2Q9BYV1 514 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 ALDH8A1Q9H2A2 487 aaPredicted RBP9□□□□□ -0.97
SCAPER-221ENST00000568549 SENP2Q9HC62 589 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 GOPCQ9HD26 462 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 CREBZFQ9NS37 354 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 SYNPO2Q9UMS6 1093 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 TMX2Q9Y320 296 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 AFG3L2Q9Y4W6 797 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 PARP14Q460N5 1801 aa9□□□□□ -0.97
SCAPER-221ENST00000568549 MYH6P13533 1939 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 KLF18A0A0U1RQI7 1052 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 A0A1W2PRG0 241 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 IRF6O14896 467 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 RAD21O60216 631 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 GJA5P36382 358 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 USP14P54578 494 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 BACE1P56817 501 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 APOBRQ0VD83 1088 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 MTMR2Q13614 643 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 RGMBQ6NW40 437 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 SYNE3Q6ZMZ3 975 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 NOL8Q76FK4 1167 aaKnown RBP8.99□□□□□ -0.97
SCAPER-221ENST00000568549 CATIPQ7Z7H3 387 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 ZNF654Q8IZM8 581 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 GMCL1P1Q8NEA9 526 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 HHIPL1Q96JK4 782 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 KIAA1683Q9H0B3 1180 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 NAP1L2Q9ULW6 460 aaPredicted RBP8.99□□□□□ -0.97
SCAPER-221ENST00000568549 MTMR7Q9Y216 660 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 SLC12A7Q9Y666 1083 aa8.99□□□□□ -0.97
SCAPER-221ENST00000568549 GOLGA8BA8MQT2 603 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 C19orf81C9J6K1 198 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 F5H6K3 240 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 CXCL11O14625 94 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 DDAH1O94760 285 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 SLC10A3P09131 477 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 ZBTB48P10074 688 aaPredicted RBP8.98□□□□□ -0.97
SCAPER-221ENST00000568549 HMGCS2P54868 508 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 KLRC3Q07444 240 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 MKRN3Q13064 507 aaKnown RBP8.98□□□□□ -0.97
SCAPER-221ENST00000568549 SNAPC2Q13487 334 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 SPRYD7Q5W111 196 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 SLFN13Q68D06 897 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 APOA5Q6Q788 366 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 USP17L2Q6R6M4 530 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 PAXIP1Q6ZW49 1069 aaPredicted RBP8.98□□□□□ -0.97
SCAPER-221ENST00000568549 NUP133Q8WUM0 1156 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 CCDC102AQ96A19 550 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 LARP6Q9BRS8 491 aaKnown RBP8.98□□□□□ -0.97
SCAPER-221ENST00000568549 MYL10Q9BUA6 226 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 VCPKMTQ9H867 229 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 TMOD4Q9NZQ9 345 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 BRPF3Q9ULD4 1205 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 KCNH4Q9UQ05 1017 aa8.98□□□□□ -0.97
SCAPER-221ENST00000568549 COL11A1P12107 1806 aaPredicted RBP8.97□□□□□ -0.97
SCAPER-221ENST00000568549 A0A0G2JLL6 359 aaPredicted RBP8.97□□□□□ -0.97
SCAPER-221ENST00000568549 RASSF10A6NK89 507 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 ZBTB43O43298 467 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 NDUFB10O96000 172 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 CALM1P0DP23 149 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 CALM2P0DP24 149 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 CALM3P0DP25 149 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 PDHBP11177 359 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 RXRAP19793 462 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 MCM2P49736 904 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 GTF2A2P52657 109 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 EVCP57679 992 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 DGKZQ13574 1117 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 DEFB115Q30KQ5 88 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 SH3D19Q5HYK7 790 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 KIAA1755Q5JYT7 1200 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 GADL1Q6ZQY3 521 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 RASGRP2Q7LDG7 609 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 PRRT2Q7Z6L0 340 aaPredicted RBP8.97□□□□□ -0.97
SCAPER-221ENST00000568549 MICU3Q86XE3 530 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 RAB11FIP4Q86YS3 637 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 SPICE1Q8N0Z3 855 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 DCAF4Q8WV16 495 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 LPAR1Q92633 364 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 CHMP4CQ96CF2 233 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 ZNF274Q96GC6 653 aaPredicted RBP8.97□□□□□ -0.97
SCAPER-221ENST00000568549 GMCL1Q96IK5 515 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 C12orf42Q96LP6 360 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 EMILIN3Q9NT22 766 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 TPCN1Q9ULQ1 816 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 ISY1Q9ULR0 285 aaKnown RBP8.97□□□□□ -0.97
SCAPER-221ENST00000568549 LIMCH1Q9UPQ0 1083 aa8.97□□□□□ -0.97
SCAPER-221ENST00000568549 RLFQ13129 1914 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms