RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 ATP2B2Q01814 1243 aa11.38□□□□□ -0.59
SF3B3-211ENST00000568291 KIAA1755Q5JYT7 1200 aa11.38□□□□□ -0.59
SF3B3-211ENST00000568291 SIAH1Q8IUQ4 282 aa11.38□□□□□ -0.59
SF3B3-211ENST00000568291 EVI5LQ96CN4 794 aa11.38□□□□□ -0.59
SF3B3-211ENST00000568291 DDRGK1Q96HY6 314 aa11.38□□□□□ -0.59
SF3B3-211ENST00000568291 FEZ1Q99689 392 aa11.38□□□□□ -0.59
SF3B3-211ENST00000568291 TMOD4Q9NZQ9 345 aa11.38□□□□□ -0.59
SF3B3-211ENST00000568291 MYH8P13535 1937 aa11.38□□□□□ -0.59
SF3B3-211ENST00000568291 A0A0D9SFI3 127 aa11.37□□□□□ -0.59
SF3B3-211ENST00000568291 PATL2C9JE40 543 aaKnown RBP11.37□□□□□ -0.59
SF3B3-211ENST00000568291 EVI5O60447 810 aa11.37□□□□□ -0.59
SF3B3-211ENST00000568291 CAPN2P17655 700 aa11.37□□□□□ -0.59
SF3B3-211ENST00000568291 IRX3P78415 501 aaPredicted RBP11.37□□□□□ -0.59
SF3B3-211ENST00000568291 NMIQ13287 307 aaPredicted RBP11.37□□□□□ -0.59
SF3B3-211ENST00000568291 SH3D19Q5HYK7 790 aa11.37□□□□□ -0.59
SF3B3-211ENST00000568291 POTEEQ6S8J3 1075 aa11.37□□□□□ -0.59
SF3B3-211ENST00000568291 IFNL3Q8IZI9 196 aa11.37□□□□□ -0.59
SF3B3-211ENST00000568291 DIS3LQ8TF46 1054 aaKnown RBP11.37□□□□□ -0.59
SF3B3-211ENST00000568291 CHMP4CQ96CF2 233 aa11.37□□□□□ -0.59
SF3B3-211ENST00000568291 CRISPLD2Q9H0B8 497 aa11.37□□□□□ -0.59
SF3B3-211ENST00000568291 PRO3102Q9H379 93 aa11.37□□□□□ -0.59
SF3B3-211ENST00000568291 CTDSPL2Q05D32 466 aa11.36□□□□□ -0.59
SF3B3-211ENST00000568291 USP17L2Q6R6M4 530 aa11.36□□□□□ -0.59
SF3B3-211ENST00000568291 C16orf86Q6ZW13 317 aa11.36□□□□□ -0.59
SF3B3-211ENST00000568291 ZNF589Q86UQ0 364 aaPredicted RBP11.36□□□□□ -0.59
SF3B3-211ENST00000568291 AMOTL1Q8IY63 956 aa11.36□□□□□ -0.59
SF3B3-211ENST00000568291 SPICE1Q8N0Z3 855 aa11.36□□□□□ -0.59
SF3B3-211ENST00000568291 TXNRD2Q9NNW7 524 aa11.36□□□□□ -0.59
SF3B3-211ENST00000568291 MORF4L1Q9UBU8 362 aa11.36□□□□□ -0.59
SF3B3-211ENST00000568291 TACC3Q9Y6A5 838 aa11.36□□□□□ -0.59
SF3B3-211ENST00000568291 C19orf81C9J6K1 198 aa11.35□□□□□ -0.59
SF3B3-211ENST00000568291 RAD21O60216 631 aa11.35□□□□□ -0.59
SF3B3-211ENST00000568291 RASA1P20936 1047 aa11.35□□□□□ -0.59
SF3B3-211ENST00000568291 TRIM32Q13049 653 aa11.35□□□□□ -0.59
SF3B3-211ENST00000568291 Q3C1V9 767 aa11.35□□□□□ -0.59
SF3B3-211ENST00000568291 SBK1Q52WX2 424 aa11.35□□□□□ -0.59
SF3B3-211ENST00000568291 FAM47AQ5JRC9 791 aa11.35□□□□□ -0.59
SF3B3-211ENST00000568291 PAWRQ96IZ0 340 aaKnown RBP11.35□□□□□ -0.59
SF3B3-211ENST00000568291 PAGR1Q9BTK6 254 aa11.35□□□□□ -0.59
SF3B3-211ENST00000568291 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.35□□□□□ -0.59
SF3B3-211ENST00000568291 MKNK2Q9HBH9 465 aa11.35□□□□□ -0.59
SF3B3-211ENST00000568291 ARPP21Q9UBL0 812 aaPredicted RBP11.35□□□□□ -0.59
SF3B3-211ENST00000568291 SWAP70Q9UH65 585 aa11.35□□□□□ -0.59
SF3B3-211ENST00000568291 A0A1W2PPC1 479 aa11.34□□□□□ -0.59
SF3B3-211ENST00000568291 EEF2P13639 858 aaKnown RBP11.34□□□□□ -0.59
SF3B3-211ENST00000568291 GNAT2P19087 354 aa11.34□□□□□ -0.59
SF3B3-211ENST00000568291 VCAM1P19320 739 aa11.34□□□□□ -0.59
SF3B3-211ENST00000568291 SDSP20132 328 aa11.34□□□□□ -0.59
SF3B3-211ENST00000568291 HERVK_113P62684 666 aa11.34□□□□□ -0.59
SF3B3-211ENST00000568291 LRRFIP1Q32MZ4 808 aaKnown RBP11.34□□□□□ -0.59
SF3B3-211ENST00000568291 CWC27Q6UX04 472 aaKnown RBP11.34□□□□□ -0.59
SF3B3-211ENST00000568291 TMEM179Q6ZVK1 233 aa11.34□□□□□ -0.59
SF3B3-211ENST00000568291 NECAB2Q7Z6G3 386 aa11.34□□□□□ -0.59
SF3B3-211ENST00000568291 C7orf61Q8IZ16 206 aa11.34□□□□□ -0.59
SF3B3-211ENST00000568291 ANKLE1Q8NAG6 615 aa11.34□□□□□ -0.59
SF3B3-211ENST00000568291 TRIB2Q92519 343 aa11.34□□□□□ -0.59
SF3B3-211ENST00000568291 KIAA1683Q9H0B3 1180 aa11.34□□□□□ -0.59
SF3B3-211ENST00000568291 NAPBQ9H115 298 aa11.34□□□□□ -0.59
SF3B3-211ENST00000568291 RPAP3Q9H6T3 665 aaPredicted RBP11.34□□□□□ -0.59
SF3B3-211ENST00000568291 HMX1Q9NP08 348 aaPredicted RBP11.34□□□□□ -0.59
SF3B3-211ENST00000568291 GINM1Q9NU53 330 aa11.34□□□□□ -0.59
SF3B3-211ENST00000568291 RBPJLQ9UBG7 517 aa11.34□□□□□ -0.59
SF3B3-211ENST00000568291 GJD2Q9UKL4 321 aa11.34□□□□□ -0.59
SF3B3-211ENST00000568291 RANBP2P49792 3224 aaKnown RBP11.34□□□□□ -0.59
SF3B3-211ENST00000568291 RPTORQ8N122 1335 aa11.34□□□□□ -0.59
SF3B3-211ENST00000568291 GSPT1P15170 499 aaKnown RBP11.33□□□□□ -0.6
SF3B3-211ENST00000568291 HOXA7P31268 230 aaPredicted RBP11.33□□□□□ -0.6
SF3B3-211ENST00000568291 HAND2P61296 217 aa11.33□□□□□ -0.6
SF3B3-211ENST00000568291 ICA1Q05084 483 aa11.33□□□□□ -0.6
SF3B3-211ENST00000568291 PPARAQ07869 468 aa11.33□□□□□ -0.6
SF3B3-211ENST00000568291 MCMDC2Q4G0Z9 681 aa11.33□□□□□ -0.6
SF3B3-211ENST00000568291 GIMAP6Q6P9H5 292 aa11.33□□□□□ -0.6
SF3B3-211ENST00000568291 SOCS4Q8WXH5 440 aa11.33□□□□□ -0.6
SF3B3-211ENST00000568291 NACAP1Q9BZK3 213 aa11.33□□□□□ -0.6
SF3B3-211ENST00000568291 IL25Q9H293 177 aa11.33□□□□□ -0.6
SF3B3-211ENST00000568291 OSBPL3Q9H4L5 887 aa11.33□□□□□ -0.6
SF3B3-211ENST00000568291 HELLSQ9NRZ9 838 aa11.33□□□□□ -0.6
SF3B3-211ENST00000568291 MYH7P12883 1935 aa11.33□□□□□ -0.6
SF3B3-211ENST00000568291 A0A0G2JMZ2 1700 aa11.32□□□□□ -0.6
SF3B3-211ENST00000568291 USP17L15C9J2P7 530 aa11.32□□□□□ -0.6
SF3B3-211ENST00000568291 USP17L13C9JLJ4 530 aa11.32□□□□□ -0.6
SF3B3-211ENST00000568291 USP17L11C9JVI0 530 aa11.32□□□□□ -0.6
SF3B3-211ENST00000568291 USP17L18D6R9N7 530 aa11.32□□□□□ -0.6
SF3B3-211ENST00000568291 USP17L22D6RA61 530 aa11.32□□□□□ -0.6
SF3B3-211ENST00000568291 USP17L17D6RBQ6 530 aa11.32□□□□□ -0.6
SF3B3-211ENST00000568291 USP17L19D6RCP7 530 aa11.32□□□□□ -0.6
SF3B3-211ENST00000568291 USP17L20D6RJB6 530 aa11.32□□□□□ -0.6
SF3B3-211ENST00000568291 CNMDO75829 334 aa11.32□□□□□ -0.6
SF3B3-211ENST00000568291 FGAP02671 866 aa11.32□□□□□ -0.6
SF3B3-211ENST00000568291 PRKAR2AP13861 404 aaKnown RBP11.32□□□□□ -0.6
SF3B3-211ENST00000568291 ZKSCAN1P17029 563 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-211ENST00000568291 CYP2B6P20813 491 aa11.32□□□□□ -0.6
SF3B3-211ENST00000568291 USP17L24Q0WX57 530 aa11.32□□□□□ -0.6
SF3B3-211ENST00000568291 CATSPERGQ6ZRH7 1159 aa11.32□□□□□ -0.6
SF3B3-211ENST00000568291 ZNF444Q8N0Y2 327 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-211ENST00000568291 GPRC5AQ8NFJ5 357 aa11.32□□□□□ -0.6
SF3B3-211ENST00000568291 GTF3C2Q8WUA4 911 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-211ENST00000568291 CCDC17Q96LX7 622 aa11.32□□□□□ -0.6
SF3B3-211ENST00000568291 NUP88Q99567 741 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-211ENST00000568291 NUDT12Q9BQG2 462 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms