RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 PABPC4Q13310 644 aaKnown RBP eCLIP20.36■□□□□ 0.85
COMMD4-220ENST00000567720 KIAA1211Q6ZU35 1233 aa20.36■□□□□ 0.85
COMMD4-220ENST00000567720 LRRC47Q8N1G4 583 aaKnown RBP20.36■□□□□ 0.85
COMMD4-220ENST00000567720 B4E1Z4 1266 aa20.35■□□□□ 0.85
COMMD4-220ENST00000567720 TTLL1O95922 423 aa20.35■□□□□ 0.85
COMMD4-220ENST00000567720 C17orf99Q6UX52 265 aa20.35■□□□□ 0.85
COMMD4-220ENST00000567720 STOX1Q6ZVD7 989 aa20.35■□□□□ 0.85
COMMD4-220ENST00000567720 SPICE1Q8N0Z3 855 aa20.35■□□□□ 0.85
COMMD4-220ENST00000567720 LPAR1Q92633 364 aa20.35■□□□□ 0.85
COMMD4-220ENST00000567720 RPAP3Q9H6T3 665 aaPredicted RBP20.35■□□□□ 0.85
COMMD4-220ENST00000567720 CPA4Q9UI42 421 aa20.35■□□□□ 0.85
COMMD4-220ENST00000567720 DOCK3Q8IZD9 2030 aa20.35■□□□□ 0.85
COMMD4-220ENST00000567720 PLXNB2O15031 1838 aa20.34■□□□□ 0.85
COMMD4-220ENST00000567720 BCRP11274 1271 aa20.34■□□□□ 0.85
COMMD4-220ENST00000567720 NOVP48745 357 aa20.34■□□□□ 0.85
COMMD4-220ENST00000567720 IRX3P78415 501 aaPredicted RBP20.34■□□□□ 0.85
COMMD4-220ENST00000567720 CAP1Q01518 475 aa20.34■□□□□ 0.85
COMMD4-220ENST00000567720 SMCR8Q8TEV9 937 aaPredicted RBP20.34■□□□□ 0.85
COMMD4-220ENST00000567720 ESR2Q92731 530 aa20.34■□□□□ 0.85
COMMD4-220ENST00000567720 CLIP2Q9UDT6 1046 aa20.34■□□□□ 0.85
COMMD4-220ENST00000567720 FKTNO75072 461 aa20.33■□□□□ 0.85
COMMD4-220ENST00000567720 KDM4AO75164 1064 aa20.33■□□□□ 0.85
COMMD4-220ENST00000567720 RASGRP2Q7LDG7 609 aa20.33■□□□□ 0.85
COMMD4-220ENST00000567720 MKL1Q969V6 931 aa20.33■□□□□ 0.85
COMMD4-220ENST00000567720 GOPCQ9HD26 462 aa20.33■□□□□ 0.85
COMMD4-220ENST00000567720 STX8Q9UNK0 236 aa20.33■□□□□ 0.85
COMMD4-220ENST00000567720 USP17L15C9J2P7 530 aa20.32■□□□□ 0.84
COMMD4-220ENST00000567720 USP17L13C9JLJ4 530 aa20.32■□□□□ 0.84
COMMD4-220ENST00000567720 USP17L11C9JVI0 530 aa20.32■□□□□ 0.84
COMMD4-220ENST00000567720 USP17L18D6R9N7 530 aa20.32■□□□□ 0.84
COMMD4-220ENST00000567720 USP17L22D6RA61 530 aa20.32■□□□□ 0.84
COMMD4-220ENST00000567720 USP17L17D6RBQ6 530 aa20.32■□□□□ 0.84
COMMD4-220ENST00000567720 USP17L19D6RCP7 530 aa20.32■□□□□ 0.84
COMMD4-220ENST00000567720 USP17L20D6RJB6 530 aa20.32■□□□□ 0.84
COMMD4-220ENST00000567720 SLC27A2O14975 620 aa20.32■□□□□ 0.84
COMMD4-220ENST00000567720 WDR46O15213 610 aaKnown RBP20.32■□□□□ 0.84
COMMD4-220ENST00000567720 NDUFB10O96000 172 aa20.32■□□□□ 0.84
COMMD4-220ENST00000567720 OSBPP22059 807 aa20.32■□□□□ 0.84
COMMD4-220ENST00000567720 HERVK_113P62684 666 aa20.32■□□□□ 0.84
COMMD4-220ENST00000567720 USP17L24Q0WX57 530 aa20.32■□□□□ 0.84
COMMD4-220ENST00000567720 CATSPERGQ6ZRH7 1159 aa20.32■□□□□ 0.84
COMMD4-220ENST00000567720 TANGO6Q9C0B7 1094 aa20.32■□□□□ 0.84
COMMD4-220ENST00000567720 CNNM2Q9H8M5 875 aa20.32■□□□□ 0.84
COMMD4-220ENST00000567720 TCP11L1Q9NUJ3 509 aa20.32■□□□□ 0.84
COMMD4-220ENST00000567720 SYNPO2Q9UMS6 1093 aa20.32■□□□□ 0.84
COMMD4-220ENST00000567720 E7EWF7 191 aa20.31■□□□□ 0.84
COMMD4-220ENST00000567720 NT5C2P49902 561 aa20.31■□□□□ 0.84
COMMD4-220ENST00000567720 SP3Q02447 781 aa20.31■□□□□ 0.84
COMMD4-220ENST00000567720 NECTIN1Q15223 517 aa20.31■□□□□ 0.84
COMMD4-220ENST00000567720 COL13A1Q5TAT6 717 aaPredicted RBP20.31■□□□□ 0.84
COMMD4-220ENST00000567720 CREB3L3Q68CJ9 461 aa20.31■□□□□ 0.84
COMMD4-220ENST00000567720 RCSD1Q6JBY9 416 aa20.31■□□□□ 0.84
COMMD4-220ENST00000567720 POTEEQ6S8J3 1075 aa20.31■□□□□ 0.84
COMMD4-220ENST00000567720 GMCL1P1Q8NEA9 526 aa20.31■□□□□ 0.84
COMMD4-220ENST00000567720 CD99L2Q8TCZ2 262 aa20.31■□□□□ 0.84
COMMD4-220ENST00000567720 NUP88Q99567 741 aaPredicted RBP20.31■□□□□ 0.84
COMMD4-220ENST00000567720 P2RX7Q99572 595 aaKnown RBP20.31■□□□□ 0.84
COMMD4-220ENST00000567720 ZKSCAN3Q9BRR0 538 aa20.31■□□□□ 0.84
COMMD4-220ENST00000567720 KRT23Q9C075 422 aa20.31■□□□□ 0.84
COMMD4-220ENST00000567720 CENPFP49454 3210 aa20.31■□□□□ 0.84
COMMD4-220ENST00000567720 SPDYE16A6NNV3 312 aaPredicted RBP20.3■□□□□ 0.84
COMMD4-220ENST00000567720 F5H6K3 240 aa20.3■□□□□ 0.84
COMMD4-220ENST00000567720 RAD21O60216 631 aa20.3■□□□□ 0.84
COMMD4-220ENST00000567720 PEX10O60683 326 aa20.3■□□□□ 0.84
COMMD4-220ENST00000567720 KLRC3Q07444 240 aa20.3■□□□□ 0.84
COMMD4-220ENST00000567720 PPP4R3BQ5MIZ7 849 aa20.3■□□□□ 0.84
COMMD4-220ENST00000567720 FAM83BQ5T0W9 1011 aa20.3■□□□□ 0.84
COMMD4-220ENST00000567720 ANKRD13CQ8N6S4 541 aa20.3■□□□□ 0.84
COMMD4-220ENST00000567720 CTGFP29279 349 aa20.29■□□□□ 0.84
COMMD4-220ENST00000567720 GCLCP48506 637 aaPredicted RBP20.29■□□□□ 0.84
COMMD4-220ENST00000567720 LACTBP83111 547 aaPredicted RBP20.29■□□□□ 0.84
COMMD4-220ENST00000567720 COL9A3Q14050 684 aaPredicted RBP20.29■□□□□ 0.84
COMMD4-220ENST00000567720 FAM110CQ1W6H9 321 aa20.29■□□□□ 0.84
COMMD4-220ENST00000567720 CYB5R4Q7L1T6 521 aa20.29■□□□□ 0.84
COMMD4-220ENST00000567720 ARHGAP39Q9C0H5 1083 aa20.29■□□□□ 0.84
COMMD4-220ENST00000567720 TXNRD2Q9NNW7 524 aa20.29■□□□□ 0.84
COMMD4-220ENST00000567720 FBXO28Q9NVF7 368 aa20.29■□□□□ 0.84
COMMD4-220ENST00000567720 ZSWIM5Q9P217 1185 aa20.29■□□□□ 0.84
COMMD4-220ENST00000567720 TNKSO95271 1327 aa20.28■□□□□ 0.84
COMMD4-220ENST00000567720 ZNF236Q9UL36 1845 aa20.28■□□□□ 0.84
COMMD4-220ENST00000567720 MYH6P13533 1939 aa20.28■□□□□ 0.84
COMMD4-220ENST00000567720 MB21D2Q8IYB1 491 aaPredicted RBP20.28■□□□□ 0.84
COMMD4-220ENST00000567720 ERO1AQ96HE7 468 aa20.28■□□□□ 0.84
COMMD4-220ENST00000567720 TMEM47Q9BQJ4 181 aa20.28■□□□□ 0.84
COMMD4-220ENST00000567720 MORF4L1Q9UBU8 362 aa20.28■□□□□ 0.84
COMMD4-220ENST00000567720 CNMDO75829 334 aa20.27■□□□□ 0.84
COMMD4-220ENST00000567720 FLOT1O75955 427 aa20.27■□□□□ 0.84
COMMD4-220ENST00000567720 TOP1P11387 765 aaKnown RBP20.27■□□□□ 0.84
COMMD4-220ENST00000567720 TRDNQ13061 729 aa20.27■□□□□ 0.84
COMMD4-220ENST00000567720 SLFN13Q68D06 897 aa20.27■□□□□ 0.84
COMMD4-220ENST00000567720 LBX2Q6XYB7 198 aa20.27■□□□□ 0.84
COMMD4-220ENST00000567720 RALYLQ86SE5 291 aaKnown RBP20.27■□□□□ 0.84
COMMD4-220ENST00000567720 IQCA1Q86XH1 822 aa20.27■□□□□ 0.84
COMMD4-220ENST00000567720 ENAHQ8N8S7 591 aaPredicted RBP20.27■□□□□ 0.84
COMMD4-220ENST00000567720 ZSCAN10Q96SZ4 725 aaPredicted RBP20.27■□□□□ 0.84
COMMD4-220ENST00000567720 MYPNQ86TC9 1320 aa20.27■□□□□ 0.83
COMMD4-220ENST00000567720 ECM2O94769 699 aaPredicted RBP20.26■□□□□ 0.83
COMMD4-220ENST00000567720 REC8O95072 547 aa20.26■□□□□ 0.83
COMMD4-220ENST00000567720 ANTXR2P58335 489 aa20.26■□□□□ 0.83
COMMD4-220ENST00000567720 CTU1Q7Z7A3 348 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms