RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 GINM1Q9NU53 330 aa13.26□□□□□ -0.29
NIFKP4-201ENST00000567275 KCNH3Q9ULD8 1083 aa13.26□□□□□ -0.29
NIFKP4-201ENST00000567275 PPT2Q9UMR5 302 aa13.26□□□□□ -0.29
NIFKP4-201ENST00000567275 EFR3BQ9Y2G0 817 aa13.26□□□□□ -0.29
NIFKP4-201ENST00000567275 MROH2BQ7Z745 1585 aa13.25□□□□□ -0.29
NIFKP4-201ENST00000567275 THOC2Q8NI27 1593 aaKnown RBP13.25□□□□□ -0.29
NIFKP4-201ENST00000567275 ANGEL2Q5VTE6 544 aaKnown RBP13.25□□□□□ -0.29
NIFKP4-201ENST00000567275 PITPNM2Q9BZ72 1349 aa13.24□□□□□ -0.29
NIFKP4-201ENST00000567275 NME1P15531 152 aaKnown RBP13.24□□□□□ -0.29
NIFKP4-201ENST00000567275 POLR2BP30876 1174 aaKnown RBP13.24□□□□□ -0.29
NIFKP4-201ENST00000567275 GJA8P48165 433 aa13.24□□□□□ -0.29
NIFKP4-201ENST00000567275 IKZF1Q13422 519 aa13.24□□□□□ -0.29
NIFKP4-201ENST00000567275 PLCL1Q15111 1095 aa13.24□□□□□ -0.29
NIFKP4-201ENST00000567275 ABI1Q8IZP0 508 aa13.24□□□□□ -0.29
NIFKP4-201ENST00000567275 RASGRP4Q8TDF6 673 aa13.24□□□□□ -0.29
NIFKP4-201ENST00000567275 Q96M66 194 aa13.24□□□□□ -0.29
NIFKP4-201ENST00000567275 ASPNQ9BXN1 380 aa13.24□□□□□ -0.29
NIFKP4-201ENST00000567275 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.24□□□□□ -0.29
NIFKP4-201ENST00000567275 ST14Q9Y5Y6 855 aa13.24□□□□□ -0.29
NIFKP4-201ENST00000567275 RBAK-RBAKDNI3L0D1 243 aa13.23□□□□□ -0.29
NIFKP4-201ENST00000567275 UBOX5O94941 541 aa13.23□□□□□ -0.29
NIFKP4-201ENST00000567275 WFDC3Q8IUB2 231 aa13.23□□□□□ -0.29
NIFKP4-201ENST00000567275 THAP5Q7Z6K1 395 aa13.22□□□□□ -0.29
NIFKP4-201ENST00000567275 SEMA3GQ9NS98 782 aa13.22□□□□□ -0.29
NIFKP4-201ENST00000567275 ZSWIM5Q9P217 1185 aa13.22□□□□□ -0.29
NIFKP4-201ENST00000567275 CCNFP41002 786 aa13.21□□□□□ -0.29
NIFKP4-201ENST00000567275 RNF4P78317 190 aa13.21□□□□□ -0.29
NIFKP4-201ENST00000567275 CCDC81Q6ZN84 652 aa13.21□□□□□ -0.29
NIFKP4-201ENST00000567275 DTWD2Q8NBA8 298 aa13.21□□□□□ -0.29
NIFKP4-201ENST00000567275 UBE2FQ969M7 185 aa13.21□□□□□ -0.29
NIFKP4-201ENST00000567275 CRBNQ96SW2 442 aa13.21□□□□□ -0.29
NIFKP4-201ENST00000567275 LRRN2O75325 713 aa13.2□□□□□ -0.3
NIFKP4-201ENST00000567275 FUT4P22083 530 aa13.2□□□□□ -0.3
NIFKP4-201ENST00000567275 SOX9P48436 509 aa13.2□□□□□ -0.3
NIFKP4-201ENST00000567275 ATP13A1Q9HD20 1204 aa13.2□□□□□ -0.3
NIFKP4-201ENST00000567275 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
NIFKP4-201ENST00000567275 TNFRSF10CO14798 259 aa13.19□□□□□ -0.3
NIFKP4-201ENST00000567275 IRAK1P51617 712 aa13.19□□□□□ -0.3
NIFKP4-201ENST00000567275 TRIT1Q9H3H1 467 aaKnown RBP13.19□□□□□ -0.3
NIFKP4-201ENST00000567275 COL17A1Q9UMD9 1497 aaPredicted RBP13.18□□□□□ -0.3
NIFKP4-201ENST00000567275 CLEC3AO75596 197 aa13.18□□□□□ -0.3
NIFKP4-201ENST00000567275 NASPP49321 788 aaPredicted RBP13.18□□□□□ -0.3
NIFKP4-201ENST00000567275 ZP2Q05996 745 aa13.18□□□□□ -0.3
NIFKP4-201ENST00000567275 PI4K2BQ8TCG2 481 aa13.18□□□□□ -0.3
NIFKP4-201ENST00000567275 RBBP8NLQ8NC74 664 aaPredicted RBP13.17□□□□□ -0.3
NIFKP4-201ENST00000567275 SLC9A7Q96T83 725 aa13.17□□□□□ -0.3
NIFKP4-201ENST00000567275 TM9SF2Q99805 663 aa13.17□□□□□ -0.3
NIFKP4-201ENST00000567275 GPATCH2Q9NW75 528 aa13.17□□□□□ -0.3
NIFKP4-201ENST00000567275 FAM86C2PA6NEL3 165 aa13.16□□□□□ -0.3
NIFKP4-201ENST00000567275 EIF6P56537 245 aaKnown RBP13.16□□□□□ -0.3
NIFKP4-201ENST00000567275 INTS3Q68E01 1043 aaKnown RBP13.16□□□□□ -0.3
NIFKP4-201ENST00000567275 CPLX3Q8WVH0 158 aa13.16□□□□□ -0.3
NIFKP4-201ENST00000567275 SEC16BQ96JE7 1060 aa13.16□□□□□ -0.3
NIFKP4-201ENST00000567275 SRRTQ9BXP5 876 aaKnown RBP13.16□□□□□ -0.3
NIFKP4-201ENST00000567275 CAPN10Q9HC96 672 aa13.16□□□□□ -0.3
NIFKP4-201ENST00000567275 GNL2Q13823 731 aaKnown RBP13.15□□□□□ -0.3
NIFKP4-201ENST00000567275 LSRQ86X29 649 aaPredicted RBP13.15□□□□□ -0.3
NIFKP4-201ENST00000567275 VWCEQ96DN2 955 aa13.15□□□□□ -0.3
NIFKP4-201ENST00000567275 SLC6A18Q96N87 628 aa13.15□□□□□ -0.3
NIFKP4-201ENST00000567275 GPR62Q9BZJ7 368 aa13.15□□□□□ -0.3
NIFKP4-201ENST00000567275 ASCC2Q9H1I8 757 aaPredicted RBP13.15□□□□□ -0.3
NIFKP4-201ENST00000567275 DUSP15Q9H1R2 295 aaPredicted RBP13.15□□□□□ -0.3
NIFKP4-201ENST00000567275 ADGRE2Q9UHX3 823 aa13.15□□□□□ -0.3
NIFKP4-201ENST00000567275 TPP2P29144 1249 aaPredicted RBP13.14□□□□□ -0.31
NIFKP4-201ENST00000567275 ZNF792Q3KQV3 632 aa13.14□□□□□ -0.31
NIFKP4-201ENST00000567275 NBPF12Q5TAG4 269 aaPredicted RBP13.14□□□□□ -0.31
NIFKP4-201ENST00000567275 VPS37DQ86XT2 251 aa13.14□□□□□ -0.31
NIFKP4-201ENST00000567275 CARS2Q9HA77 564 aaKnown RBP13.14□□□□□ -0.31
NIFKP4-201ENST00000567275 LMCD1Q9NZU5 365 aa13.14□□□□□ -0.31
NIFKP4-201ENST00000567275 GUCY2CP25092 1073 aa13.13□□□□□ -0.31
NIFKP4-201ENST00000567275 CLEC16AQ2KHT3 1053 aa13.13□□□□□ -0.31
NIFKP4-201ENST00000567275 TMPRSS7Q7RTY8 843 aa13.13□□□□□ -0.31
NIFKP4-201ENST00000567275 TMEM192Q8IY95 271 aa13.13□□□□□ -0.31
NIFKP4-201ENST00000567275 TAB3Q8N5C8 712 aaPredicted RBP13.13□□□□□ -0.31
NIFKP4-201ENST00000567275 ZNF512BQ96KM6 892 aaPredicted RBP13.13□□□□□ -0.31
NIFKP4-201ENST00000567275 DHRS1Q96LJ7 313 aa13.13□□□□□ -0.31
NIFKP4-201ENST00000567275 MKRN2Q9H000 416 aaKnown RBP13.13□□□□□ -0.31
NIFKP4-201ENST00000567275 ACRP10323 421 aa13.12□□□□□ -0.31
NIFKP4-201ENST00000567275 SLC23A3Q6PIS1 610 aa13.12□□□□□ -0.31
NIFKP4-201ENST00000567275 RUFY4Q6ZNE9 571 aa13.12□□□□□ -0.31
NIFKP4-201ENST00000567275 PRDM7Q9NQW5 492 aa13.12□□□□□ -0.31
NIFKP4-201ENST00000567275 KIF21AQ7Z4S6 1674 aa13.12□□□□□ -0.31
NIFKP4-201ENST00000567275 MRC2Q9UBG0 1479 aa13.11□□□□□ -0.31
NIFKP4-201ENST00000567275 SRFP11831 508 aa13.11□□□□□ -0.31
NIFKP4-201ENST00000567275 RC3H2Q9HBD1 1191 aaKnown RBP13.11□□□□□ -0.31
NIFKP4-201ENST00000567275 WASH4PA8MWX3 477 aa13.1□□□□□ -0.31
NIFKP4-201ENST00000567275 RNASE1P07998 156 aaKnown RBP13.1□□□□□ -0.31
NIFKP4-201ENST00000567275 TSPYL5Q86VY4 417 aaPredicted RBP13.1□□□□□ -0.31
NIFKP4-201ENST00000567275 CREG2Q8IUH2 290 aa13.1□□□□□ -0.31
NIFKP4-201ENST00000567275 OR6P1Q8NGX9 317 aa13.1□□□□□ -0.31
NIFKP4-201ENST00000567275 MBNL3Q9NUK0 354 aaKnown RBP13.1□□□□□ -0.31
NIFKP4-201ENST00000567275 DUSP13Q9UII6 198 aa13.1□□□□□ -0.31
NIFKP4-201ENST00000567275 STRIP2Q9ULQ0 834 aa13.1□□□□□ -0.31
NIFKP4-201ENST00000567275 WDR62O43379 1518 aa13.09□□□□□ -0.31
NIFKP4-201ENST00000567275 ATF4P18848 351 aaPredicted RBP13.09□□□□□ -0.31
NIFKP4-201ENST00000567275 GIPRP48546 466 aa13.09□□□□□ -0.31
NIFKP4-201ENST00000567275 IGSF5Q9NSI5 407 aa13.09□□□□□ -0.31
NIFKP4-201ENST00000567275 SUCOQ9UBS9 1254 aaKnown RBP13.09□□□□□ -0.31
NIFKP4-201ENST00000567275 ADAMTS6Q9UKP5 1117 aa13.09□□□□□ -0.31
NIFKP4-201ENST00000567275 NMIQ13287 307 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms