RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 RNF40O75150 1001 aa17.72■□□□□ 0.43
COMMD4-215ENST00000566843 AFMP43652 599 aa17.72■□□□□ 0.43
COMMD4-215ENST00000566843 IFIT5Q13325 482 aaKnown RBP17.72■□□□□ 0.43
COMMD4-215ENST00000566843 ICE2Q659A1 982 aa17.72■□□□□ 0.43
COMMD4-215ENST00000566843 PAPPAQ13219 1627 aa17.71■□□□□ 0.43
COMMD4-215ENST00000566843 RNF225M0QZC1 329 aaPredicted RBP17.71■□□□□ 0.43
COMMD4-215ENST00000566843 PSMD14O00487 310 aa17.71■□□□□ 0.43
COMMD4-215ENST00000566843 CPP00450 1065 aa17.71■□□□□ 0.43
COMMD4-215ENST00000566843 NCAPH2Q6IBW4 605 aa17.71■□□□□ 0.43
COMMD4-215ENST00000566843 PACS2Q86VP3 889 aa17.71■□□□□ 0.43
COMMD4-215ENST00000566843 IFNL3Q8IZI9 196 aa17.71■□□□□ 0.43
COMMD4-215ENST00000566843 AFAP1L1Q8TED9 768 aa17.71■□□□□ 0.43
COMMD4-215ENST00000566843 YY1AP1Q9H869 796 aa17.71■□□□□ 0.43
COMMD4-215ENST00000566843 CABP5Q9NP86 173 aa17.71■□□□□ 0.43
COMMD4-215ENST00000566843 CCDC196A0A1B0GTZ2 297 aa17.7■□□□□ 0.42
COMMD4-215ENST00000566843 TARSL2A2RTX5 802 aaKnown RBP17.7■□□□□ 0.42
COMMD4-215ENST00000566843 TRIM75PA6NK02 468 aa17.7■□□□□ 0.42
COMMD4-215ENST00000566843 COPB1P53618 953 aaKnown RBP17.7■□□□□ 0.42
COMMD4-215ENST00000566843 SPAG1Q07617 926 aa17.7■□□□□ 0.42
COMMD4-215ENST00000566843 METTL24Q5JXM2 366 aa17.7■□□□□ 0.42
COMMD4-215ENST00000566843 AKNAD1Q5T1N1 836 aa17.7■□□□□ 0.42
COMMD4-215ENST00000566843 PPM1EQ8WY54 764 aa17.7■□□□□ 0.42
COMMD4-215ENST00000566843 EPSTI1Q96J88 318 aa17.7■□□□□ 0.42
COMMD4-215ENST00000566843 HPCAL4Q9UM19 191 aa17.7■□□□□ 0.42
COMMD4-215ENST00000566843 REXO2Q9Y3B8 237 aaKnown RBP17.7■□□□□ 0.42
COMMD4-215ENST00000566843 PHACTR2O75167 634 aa17.7■□□□□ 0.42
COMMD4-215ENST00000566843 IDH1O75874 414 aaKnown RBP17.7■□□□□ 0.42
COMMD4-215ENST00000566843 ARID4AP29374 1257 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-215ENST00000566843 CTDSPL2Q05D32 466 aa17.7■□□□□ 0.42
COMMD4-215ENST00000566843 MAP9Q49MG5 647 aa17.7■□□□□ 0.42
COMMD4-215ENST00000566843 VGLL2Q8N8G2 317 aa17.7■□□□□ 0.42
COMMD4-215ENST00000566843 FERMT2Q96AC1 680 aa17.7■□□□□ 0.42
COMMD4-215ENST00000566843 ZFP91Q96JP5 570 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-215ENST00000566843 SLF1Q9BQI6 1058 aa17.7■□□□□ 0.42
COMMD4-215ENST00000566843 CARD10Q9BWT7 1032 aa17.7■□□□□ 0.42
COMMD4-215ENST00000566843 N4BP3O15049 544 aa17.69■□□□□ 0.42
COMMD4-215ENST00000566843 SMYD4Q8IYR2 804 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-215ENST00000566843 AIDAQ96BJ3 306 aa17.69■□□□□ 0.42
COMMD4-215ENST00000566843 RWDD2AQ9UIY3 292 aa17.69■□□□□ 0.42
COMMD4-215ENST00000566843 CTNND2Q9UQB3 1225 aa17.69■□□□□ 0.42
COMMD4-215ENST00000566843 BMP15O95972 392 aa17.69■□□□□ 0.42
COMMD4-215ENST00000566843 CASP1P29466 404 aa17.69■□□□□ 0.42
COMMD4-215ENST00000566843 CCT6AP40227 531 aaKnown RBP17.69■□□□□ 0.42
COMMD4-215ENST00000566843 PAPD7Q5XG87 772 aaKnown RBP17.69■□□□□ 0.42
COMMD4-215ENST00000566843 ZNF662Q6ZS27 426 aa17.69■□□□□ 0.42
COMMD4-215ENST00000566843 TMTC2Q8N394 836 aa17.69■□□□□ 0.42
COMMD4-215ENST00000566843 SYMPKQ92797 1274 aaKnown RBP17.69■□□□□ 0.42
COMMD4-215ENST00000566843 RPGRIP1Q96KN7 1286 aa17.69■□□□□ 0.42
COMMD4-215ENST00000566843 NAPBQ9H115 298 aa17.69■□□□□ 0.42
COMMD4-215ENST00000566843 BRMS1Q9HCU9 246 aa17.69■□□□□ 0.42
COMMD4-215ENST00000566843 EPN1Q9Y6I3 576 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-215ENST00000566843 ATP2B1P20020 1258 aa17.68■□□□□ 0.42
COMMD4-215ENST00000566843 CDC25AP30304 524 aa17.68■□□□□ 0.42
COMMD4-215ENST00000566843 WTAPQ15007 396 aa17.68■□□□□ 0.42
COMMD4-215ENST00000566843 TTLL11Q8NHH1 800 aa17.68■□□□□ 0.42
COMMD4-215ENST00000566843 STAG1Q8WVM7 1258 aa17.68■□□□□ 0.42
COMMD4-215ENST00000566843 SHISA4Q96DD7 197 aa17.68■□□□□ 0.42
COMMD4-215ENST00000566843 NUP88Q99567 741 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-215ENST00000566843 HAUS4Q9H6D7 363 aa17.68■□□□□ 0.42
COMMD4-215ENST00000566843 SHOX2O60902 331 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-215ENST00000566843 NDUFA10O95299 355 aa17.68■□□□□ 0.42
COMMD4-215ENST00000566843 UQCRFS1P1P0C7P4 283 aa17.68■□□□□ 0.42
COMMD4-215ENST00000566843 HSPA1LP34931 641 aa17.68■□□□□ 0.42
COMMD4-215ENST00000566843 KRT9P35527 623 aa17.68■□□□□ 0.42
COMMD4-215ENST00000566843 MFSD6Q6ZSS7 791 aa17.68■□□□□ 0.42
COMMD4-215ENST00000566843 EFCAB13Q8IY85 973 aa17.68■□□□□ 0.42
COMMD4-215ENST00000566843 ZBTB38Q8NAP3 1195 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-215ENST00000566843 COG1Q8WTW3 980 aa17.68■□□□□ 0.42
COMMD4-215ENST00000566843 CCDC85AQ96PX6 553 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-215ENST00000566843 CDHR2Q9BYE9 1310 aa17.67■□□□□ 0.42
COMMD4-215ENST00000566843 SART3Q15020 963 aaKnown RBP17.67■□□□□ 0.42
COMMD4-215ENST00000566843 FANCBQ8NB91 859 aa17.67■□□□□ 0.42
COMMD4-215ENST00000566843 RNF26Q9BY78 433 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-215ENST00000566843 IQSEC3Q9UPP2 1182 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-215ENST00000566843 MYH6P13533 1939 aa17.67■□□□□ 0.42
COMMD4-215ENST00000566843 COL14A1Q05707 1796 aaKnown RBP17.67■□□□□ 0.42
COMMD4-215ENST00000566843 ERVV-2B6SEH9 535 aa17.67■□□□□ 0.42
COMMD4-215ENST00000566843 TCP11X2Q5H9J9 407 aa17.67■□□□□ 0.42
COMMD4-215ENST00000566843 ZBTB9Q96C00 473 aa17.67■□□□□ 0.42
COMMD4-215ENST00000566843 FAM89AQ96GI7 184 aa17.67■□□□□ 0.42
COMMD4-215ENST00000566843 CHP1Q99653 195 aa17.67■□□□□ 0.42
COMMD4-215ENST00000566843 VPS16Q9H269 839 aa17.67■□□□□ 0.42
COMMD4-215ENST00000566843 JRKLQ9Y4A0 524 aa17.67■□□□□ 0.42
COMMD4-215ENST00000566843 DOCK2Q92608 1830 aa17.66■□□□□ 0.42
COMMD4-215ENST00000566843 XDHP47989 1333 aa17.66■□□□□ 0.42
COMMD4-215ENST00000566843 DISP2A7MBM2 1401 aa17.66■□□□□ 0.42
COMMD4-215ENST00000566843 FAM205CA6NFA0 338 aa17.66■□□□□ 0.42
COMMD4-215ENST00000566843 GSG1L2A8MUP6 293 aa17.66■□□□□ 0.42
COMMD4-215ENST00000566843 IL2RBP14784 551 aa17.66■□□□□ 0.42
COMMD4-215ENST00000566843 E2F4Q16254 413 aa17.66■□□□□ 0.42
COMMD4-215ENST00000566843 DNAJC21Q5F1R6 531 aaKnown RBP17.66■□□□□ 0.42
COMMD4-215ENST00000566843 LDHAL6AQ6ZMR3 332 aa17.66■□□□□ 0.42
COMMD4-215ENST00000566843 MMS19Q96T76 1030 aa17.66■□□□□ 0.42
COMMD4-215ENST00000566843 PHF20Q9BVI0 1012 aa17.66■□□□□ 0.42
COMMD4-215ENST00000566843 TNS2Q63HR2 1409 aa17.66■□□□□ 0.42
COMMD4-215ENST00000566843 KCNJ18B7U540 433 aa17.65■□□□□ 0.42
COMMD4-215ENST00000566843 PHKA1P46020 1223 aa17.65■□□□□ 0.42
COMMD4-215ENST00000566843 GTF2A1P52655 376 aaPredicted RBP17.65■□□□□ 0.42
COMMD4-215ENST00000566843 AKAP17AQ02040 695 aaKnown RBP17.65■□□□□ 0.42
COMMD4-215ENST00000566843 STIM1Q13586 685 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms