RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 MKNK2Q9HBH9 465 aa22.44■■□□□ 1.18
IFT140-208ENST00000566818 ZNF287Q9HBT7 754 aa22.44■■□□□ 1.18
IFT140-208ENST00000566818 MINDY4BA8MYZ0 360 aa22.43■■□□□ 1.18
IFT140-208ENST00000566818 SMIM22K7EJ46 135 aa22.43■■□□□ 1.18
IFT140-208ENST00000566818 CNMDO75829 334 aa22.43■■□□□ 1.18
IFT140-208ENST00000566818 XRCC5P13010 732 aaKnown RBP22.43■■□□□ 1.18
IFT140-208ENST00000566818 RGS2P41220 211 aa22.43■■□□□ 1.18
IFT140-208ENST00000566818 ATP2B2Q01814 1243 aa22.43■■□□□ 1.18
IFT140-208ENST00000566818 COG2Q14746 738 aa22.43■■□□□ 1.18
IFT140-208ENST00000566818 CLEC10AQ8IUN9 316 aa22.43■■□□□ 1.18
IFT140-208ENST00000566818 RWDD1Q9H446 243 aaPredicted RBP22.43■■□□□ 1.18
IFT140-208ENST00000566818 VCPKMTQ9H867 229 aa22.43■■□□□ 1.18
IFT140-208ENST00000566818 EPB41L4AQ9HCS5 686 aaPredicted RBP22.43■■□□□ 1.18
IFT140-208ENST00000566818 HOXC10Q9NYD6 342 aa22.43■■□□□ 1.18
IFT140-208ENST00000566818 SGPL1O95470 568 aa22.42■■□□□ 1.18
IFT140-208ENST00000566818 CYP2B6P20813 491 aa22.42■■□□□ 1.18
IFT140-208ENST00000566818 ZMYM1Q5SVZ6 1142 aa22.42■■□□□ 1.18
IFT140-208ENST00000566818 WDR78Q5VTH9 848 aa22.42■■□□□ 1.18
IFT140-208ENST00000566818 APBA2Q99767 749 aa22.42■■□□□ 1.18
IFT140-208ENST00000566818 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.42■■□□□ 1.18
IFT140-208ENST00000566818 GOPCQ9HD26 462 aa22.42■■□□□ 1.18
IFT140-208ENST00000566818 PAK6Q9NQU5 681 aaPredicted RBP22.42■■□□□ 1.18
IFT140-208ENST00000566818 STAP2Q9UGK3 403 aa22.42■■□□□ 1.18
IFT140-208ENST00000566818 A0A0G2JMZ2 1700 aa22.41■■□□□ 1.18
IFT140-208ENST00000566818 PATL2C9JE40 543 aaKnown RBP22.41■■□□□ 1.18
IFT140-208ENST00000566818 WDR46O15213 610 aaKnown RBP22.41■■□□□ 1.18
IFT140-208ENST00000566818 ZKSCAN1P17029 563 aaPredicted RBP22.41■■□□□ 1.18
IFT140-208ENST00000566818 POTEEQ6S8J3 1075 aa22.41■■□□□ 1.18
IFT140-208ENST00000566818 MB21D1Q8N884 522 aa22.41■■□□□ 1.18
IFT140-208ENST00000566818 EVI5LQ96CN4 794 aa22.41■■□□□ 1.18
IFT140-208ENST00000566818 BTBD7Q9P203 1132 aa22.41■■□□□ 1.18
IFT140-208ENST00000566818 IVNS1ABPQ9Y6Y0 642 aa22.41■■□□□ 1.18
IFT140-208ENST00000566818 MKI67P46013 3256 aaKnown RBP22.41■■□□□ 1.18
IFT140-208ENST00000566818 GREB1LQ9C091 1923 aaPredicted RBP22.4■■□□□ 1.18
IFT140-208ENST00000566818 FLOT1O75955 427 aa22.4■■□□□ 1.18
IFT140-208ENST00000566818 FARP2O94887 1054 aaPredicted RBP22.4■■□□□ 1.18
IFT140-208ENST00000566818 EEF2P13639 858 aaKnown RBP22.4■■□□□ 1.18
IFT140-208ENST00000566818 PDE1AP54750 535 aa22.4■■□□□ 1.18
IFT140-208ENST00000566818 MORN1Q5T089 497 aa22.4■■□□□ 1.18
IFT140-208ENST00000566818 SIAH1Q8IUQ4 282 aa22.4■■□□□ 1.18
IFT140-208ENST00000566818 IFNL3Q8IZI9 196 aa22.4■■□□□ 1.18
IFT140-208ENST00000566818 SPICE1Q8N0Z3 855 aa22.4■■□□□ 1.18
IFT140-208ENST00000566818 TRIB2Q92519 343 aa22.4■■□□□ 1.18
IFT140-208ENST00000566818 DEFB118Q96PH6 123 aa22.4■■□□□ 1.18
IFT140-208ENST00000566818 NAPBQ9H115 298 aa22.4■■□□□ 1.18
IFT140-208ENST00000566818 RPTORQ8N122 1335 aa22.39■■□□□ 1.18
IFT140-208ENST00000566818 TFRCP02786 760 aaKnown RBP22.39■■□□□ 1.17
IFT140-208ENST00000566818 SLC3A2P08195 630 aaKnown RBP22.39■■□□□ 1.17
IFT140-208ENST00000566818 RASA1P20936 1047 aa22.39■■□□□ 1.17
IFT140-208ENST00000566818 STK11IPQ8N1F8 1099 aa22.39■■□□□ 1.17
IFT140-208ENST00000566818 USP6NLQ92738 828 aa22.39■■□□□ 1.17
IFT140-208ENST00000566818 SEC62Q99442 399 aaKnown RBP22.39■■□□□ 1.17
IFT140-208ENST00000566818 HTATIP2Q9BUP3 242 aa22.39■■□□□ 1.17
IFT140-208ENST00000566818 HMX1Q9NP08 348 aaPredicted RBP22.39■■□□□ 1.17
IFT140-208ENST00000566818 SLC15A5A6NIM6 579 aa22.38■■□□□ 1.17
IFT140-208ENST00000566818 DSG3P32926 999 aa22.38■■□□□ 1.17
IFT140-208ENST00000566818 MAP2K5Q13163 448 aa22.38■■□□□ 1.17
IFT140-208ENST00000566818 KIAA1755Q5JYT7 1200 aa22.38■■□□□ 1.17
IFT140-208ENST00000566818 RAD21O60216 631 aa22.37■■□□□ 1.17
IFT140-208ENST00000566818 PDE4BQ07343 736 aa22.37■■□□□ 1.17
IFT140-208ENST00000566818 TICAM2Q86XR7 235 aa22.37■■□□□ 1.17
IFT140-208ENST00000566818 SMC5Q8IY18 1101 aa22.37■■□□□ 1.17
IFT140-208ENST00000566818 ZNF444Q8N0Y2 327 aaPredicted RBP22.37■■□□□ 1.17
IFT140-208ENST00000566818 LNPKQ9C0E8 428 aa22.37■■□□□ 1.17
IFT140-208ENST00000566818 PRKAR2AP13861 404 aaKnown RBP22.36■■□□□ 1.17
IFT140-208ENST00000566818 PTPREP23469 700 aa22.36■■□□□ 1.17
IFT140-208ENST00000566818 TRIM32Q13049 653 aa22.36■■□□□ 1.17
IFT140-208ENST00000566818 UBE2Q1Q7Z7E8 422 aa22.36■■□□□ 1.17
IFT140-208ENST00000566818 SHCBP1Q8NEM2 672 aa22.36■■□□□ 1.17
IFT140-208ENST00000566818 EXOC6Q8TAG9 804 aa22.36■■□□□ 1.17
IFT140-208ENST00000566818 SPATC1LQ9H0A9 340 aa22.36■■□□□ 1.17
IFT140-208ENST00000566818 CRISPLD2Q9H0B8 497 aa22.36■■□□□ 1.17
IFT140-208ENST00000566818 NYAP2Q9P242 653 aa22.36■■□□□ 1.17
IFT140-208ENST00000566818 RLFQ13129 1914 aa22.35■■□□□ 1.17
IFT140-208ENST00000566818 GRB14Q14449 540 aa22.35■■□□□ 1.17
IFT140-208ENST00000566818 MAP3K21Q5TCX8 1036 aa22.35■■□□□ 1.17
IFT140-208ENST00000566818 SAMD1Q6SPF0 538 aaPredicted RBP22.35■■□□□ 1.17
IFT140-208ENST00000566818 ATG4CQ96DT6 458 aa22.35■■□□□ 1.17
IFT140-208ENST00000566818 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.35■■□□□ 1.17
IFT140-208ENST00000566818 MOV10L1Q9BXT6 1211 aaKnown RBP22.35■■□□□ 1.17
IFT140-208ENST00000566818 ZNF236Q9UL36 1845 aa22.35■■□□□ 1.17
IFT140-208ENST00000566818 PARP14Q460N5 1801 aa22.34■■□□□ 1.17
IFT140-208ENST00000566818 PRDM1O75626 825 aa22.34■■□□□ 1.17
IFT140-208ENST00000566818 PPARAQ07869 468 aa22.34■■□□□ 1.17
IFT140-208ENST00000566818 PLS1Q14651 629 aa22.34■■□□□ 1.17
IFT140-208ENST00000566818 ANKLE1Q8NAG6 615 aa22.34■■□□□ 1.17
IFT140-208ENST00000566818 HELLSQ9NRZ9 838 aa22.34■■□□□ 1.17
IFT140-208ENST00000566818 PLIN4Q96Q06 1357 aa22.34■■□□□ 1.17
IFT140-208ENST00000566818 STRNO43815 780 aa22.33■■□□□ 1.17
IFT140-208ENST00000566818 CCL14Q16627 93 aa22.33■■□□□ 1.17
IFT140-208ENST00000566818 FAM83BQ5T0W9 1011 aa22.33■■□□□ 1.17
IFT140-208ENST00000566818 MFSD14CQ5VZR4 134 aa22.33■■□□□ 1.17
IFT140-208ENST00000566818 B4GALNT3Q6L9W6 998 aa22.33■■□□□ 1.17
IFT140-208ENST00000566818 CCDC129Q6ZRS4 1044 aa22.33■■□□□ 1.17
IFT140-208ENST00000566818 DPF3Q92784 378 aa22.33■■□□□ 1.17
IFT140-208ENST00000566818 MROH8Q9H579 483 aa22.33■■□□□ 1.17
IFT140-208ENST00000566818 TRIM6-TRIM34B2RNG4 842 aa22.32■■□□□ 1.16
IFT140-208ENST00000566818 HOXC6P09630 235 aa22.32■■□□□ 1.16
IFT140-208ENST00000566818 TSPY3P0CV98 308 aa22.32■■□□□ 1.16
IFT140-208ENST00000566818 TSPY8P0CW00 308 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms