RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 PRC1O43663 620 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 CETPP11597 493 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 CPA1P15085 419 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 ZKSCAN1P17029 563 aaPredicted RBP9.62□□□□□ -0.87
CDH13-208ENST00000566333 VCAM1P19320 739 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 MAP2K2P36507 400 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 ANAPC15P60006 121 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 EXOSC10Q01780 885 aaKnown RBP9.62□□□□□ -0.87
CDH13-208ENST00000566333 TRDNQ13061 729 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 KRT32Q14532 448 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 ZYXQ15942 572 aaKnown RBP9.62□□□□□ -0.87
CDH13-208ENST00000566333 TREML2Q5T2D2 321 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 CHST3Q7LGC8 479 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 PROCA1Q8NCQ7 364 aaPredicted RBP9.62□□□□□ -0.87
CDH13-208ENST00000566333 GMCL1P1Q8NEA9 526 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 MKL1Q969V6 931 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 TCEANC2Q96MN5 208 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 JAKMIP1Q96N16 626 aaKnown RBP9.62□□□□□ -0.87
CDH13-208ENST00000566333 ZSCAN10Q96SZ4 725 aaPredicted RBP9.62□□□□□ -0.87
CDH13-208ENST00000566333 KIF2CQ99661 725 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 VCPKMTQ9H867 229 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 LY9Q9HBG7 655 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 GPHNQ9NQX3 736 aaPredicted RBP9.62□□□□□ -0.87
CDH13-208ENST00000566333 STX8Q9UNK0 236 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 LCTP09848 1927 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 C19orf81C9J6K1 198 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 SH2B2O14492 632 aaPredicted RBP9.61□□□□□ -0.87
CDH13-208ENST00000566333 EIF5BO60841 1220 aaKnown RBP9.61□□□□□ -0.87
CDH13-208ENST00000566333 NDUFB10O96000 172 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 MCCP23508 829 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 MCM5P33992 734 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 TM4SF4P48230 202 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 RBM25P49756 843 aaKnown RBP9.61□□□□□ -0.87
CDH13-208ENST00000566333 ATP2B2Q01814 1243 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 SREBF2Q12772 1141 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 USP17L2Q6R6M4 530 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 IQCA1Q86XH1 822 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 DGKHQ86XP1 1220 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 IFNL1Q8IU54 200 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 FAM43AQ8N2R8 423 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 JMYQ8N9B5 988 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 IGDCC4Q8TDY8 1250 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 ANKS1AQ92625 1134 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 TBC1D32Q96NH3 1257 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 NEK1Q96PY6 1258 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 TMEM47Q9BQJ4 181 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 UBAC1Q9BSL1 405 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 LRRC2Q9BYS8 371 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 SH2D4AQ9H788 454 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 CLIP2Q9UDT6 1046 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 AGTPBP1Q9UPW5 1226 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 CASP8AP2Q9UKL3 1982 aa9.61□□□□□ -0.87
CDH13-208ENST00000566333 SNHG28P0DPA3 235 aa9.6□□□□□ -0.87
CDH13-208ENST00000566333 TOP1P11387 765 aaKnown RBP9.6□□□□□ -0.87
CDH13-208ENST00000566333 CASTP20810 708 aaKnown RBP9.6□□□□□ -0.87
CDH13-208ENST00000566333 RPS6KB1P23443 525 aa9.6□□□□□ -0.87
CDH13-208ENST00000566333 USP14P54578 494 aa9.6□□□□□ -0.87
CDH13-208ENST00000566333 PPP4R3BQ5MIZ7 849 aa9.6□□□□□ -0.87
CDH13-208ENST00000566333 GADL1Q6ZQY3 521 aa9.6□□□□□ -0.87
CDH13-208ENST00000566333 DHX32Q7L7V1 743 aaKnown RBP9.6□□□□□ -0.87
CDH13-208ENST00000566333 ANKRD23Q86SG2 305 aa9.6□□□□□ -0.87
CDH13-208ENST00000566333 SPICE1Q8N0Z3 855 aa9.6□□□□□ -0.87
CDH13-208ENST00000566333 LPAR1Q92633 364 aa9.6□□□□□ -0.87
CDH13-208ENST00000566333 NUP88Q99567 741 aaPredicted RBP9.6□□□□□ -0.87
CDH13-208ENST00000566333 MTA3Q9BTC8 594 aa9.6□□□□□ -0.87
CDH13-208ENST00000566333 AGXT2Q9BYV1 514 aa9.6□□□□□ -0.87
CDH13-208ENST00000566333 UPF3BQ9BZI7 483 aaKnown RBP9.6□□□□□ -0.87
CDH13-208ENST00000566333 TM6SF1Q9BZW5 370 aa9.6□□□□□ -0.87
CDH13-208ENST00000566333 ZSWIM6Q9HCJ5 1215 aa9.6□□□□□ -0.87
CDH13-208ENST00000566333 ZNF236Q9UL36 1845 aa9.6□□□□□ -0.87
CDH13-208ENST00000566333 CENPFP49454 3210 aa9.6□□□□□ -0.87
CDH13-208ENST00000566333 ZNFX1Q9P2E3 1918 aaKnown RBP9.59□□□□□ -0.87
CDH13-208ENST00000566333 F5H6K3 240 aa9.59□□□□□ -0.87
CDH13-208ENST00000566333 IFIT3O14879 490 aaKnown RBP9.59□□□□□ -0.87
CDH13-208ENST00000566333 WDR46O15213 610 aaKnown RBP9.59□□□□□ -0.87
CDH13-208ENST00000566333 HMGB1P09429 215 aaKnown RBP9.59□□□□□ -0.87
CDH13-208ENST00000566333 PDHBP11177 359 aa9.59□□□□□ -0.87
CDH13-208ENST00000566333 KLRC3Q07444 240 aa9.59□□□□□ -0.87
CDH13-208ENST00000566333 TMEM67Q5HYA8 995 aa9.59□□□□□ -0.87
CDH13-208ENST00000566333 IFIT1BQ5T764 474 aaKnown RBP9.59□□□□□ -0.87
CDH13-208ENST00000566333 BLOC1S2Q6QNY1 142 aa9.59□□□□□ -0.87
CDH13-208ENST00000566333 POTEEQ6S8J3 1075 aa9.59□□□□□ -0.87
CDH13-208ENST00000566333 FASTKD5Q7L8L6 764 aaKnown RBP9.59□□□□□ -0.87
CDH13-208ENST00000566333 SGMS1Q86VZ5 419 aa9.59□□□□□ -0.87
CDH13-208ENST00000566333 FBXL16Q8N461 479 aa9.59□□□□□ -0.87
CDH13-208ENST00000566333 PNMA1Q8ND90 353 aa9.59□□□□□ -0.87
CDH13-208ENST00000566333 GMCL1Q96IK5 515 aa9.59□□□□□ -0.87
CDH13-208ENST00000566333 TMEM87BQ96K49 555 aa9.59□□□□□ -0.87
CDH13-208ENST00000566333 TTC14Q96N46 770 aa9.59□□□□□ -0.87
CDH13-208ENST00000566333 C22orf23Q9BZE7 217 aa9.59□□□□□ -0.87
CDH13-208ENST00000566333 RPAP3Q9H6T3 665 aaPredicted RBP9.59□□□□□ -0.87
CDH13-208ENST00000566333 GOPCQ9HD26 462 aa9.59□□□□□ -0.87
CDH13-208ENST00000566333 ZCCHC17Q9NP64 241 aaKnown RBP9.59□□□□□ -0.87
CDH13-208ENST00000566333 TMOD4Q9NZQ9 345 aa9.59□□□□□ -0.87
CDH13-208ENST00000566333 SLC45A1Q9Y2W3 748 aa9.59□□□□□ -0.87
CDH13-208ENST00000566333 NID2Q14112 1375 aa9.59□□□□□ -0.87
CDH13-208ENST00000566333 PLXNA1Q9UIW2 1896 aa9.59□□□□□ -0.87
CDH13-208ENST00000566333 PDHXO00330 501 aa9.58□□□□□ -0.88
CDH13-208ENST00000566333 PSMA5P28066 241 aa9.58□□□□□ -0.88
CDH13-208ENST00000566333 HOXA7P31268 230 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms