RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ANKS4BQ8N8V4 417 aa4.63□□□□□ -1.67
SMG1-212ENST00000566328 ACSF2Q96CM8 615 aaPredicted RBP4.63□□□□□ -1.67
SMG1-212ENST00000566328 SP110Q9HB58 689 aa4.63□□□□□ -1.67
SMG1-212ENST00000566328 PCDHA11Q9Y5I1 949 aa4.63□□□□□ -1.67
SMG1-212ENST00000566328 MYOCOSA0A1B0GUC4 107 aa4.62□□□□□ -1.67
SMG1-212ENST00000566328 RNF141Q8WVD5 230 aa4.62□□□□□ -1.67
SMG1-212ENST00000566328 C20orf173Q96LM9 149 aa4.62□□□□□ -1.67
SMG1-212ENST00000566328 GPR160Q9UJ42 338 aa4.62□□□□□ -1.67
SMG1-212ENST00000566328 JAG2Q9Y219 1238 aa4.62□□□□□ -1.67
SMG1-212ENST00000566328 AK5Q9Y6K8 562 aa4.62□□□□□ -1.67
SMG1-212ENST00000566328 FOXD2O60548 495 aaPredicted RBP4.61□□□□□ -1.67
SMG1-212ENST00000566328 BPNT1O95861 308 aa4.61□□□□□ -1.67
SMG1-212ENST00000566328 P4HBP07237 508 aaKnown RBP4.61□□□□□ -1.67
SMG1-212ENST00000566328 SYN1P17600 705 aa4.61□□□□□ -1.67
SMG1-212ENST00000566328 PLCG1P19174 1290 aa4.61□□□□□ -1.67
SMG1-212ENST00000566328 TNNI2P48788 182 aa4.61□□□□□ -1.67
SMG1-212ENST00000566328 CHMP4BP1P59074 171 aa4.61□□□□□ -1.67
SMG1-212ENST00000566328 MAP3K11Q16584 847 aa4.61□□□□□ -1.67
SMG1-212ENST00000566328 CLEC16AQ2KHT3 1053 aa4.61□□□□□ -1.67
SMG1-212ENST00000566328 TIGD5Q53EQ6 642 aa4.61□□□□□ -1.67
SMG1-212ENST00000566328 ERICH6BQ5W0A0 696 aa4.61□□□□□ -1.67
SMG1-212ENST00000566328 CCDC84Q86UT8 332 aaPredicted RBP4.61□□□□□ -1.67
SMG1-212ENST00000566328 SLFN12Q8IYM2 578 aa4.61□□□□□ -1.67
SMG1-212ENST00000566328 FAM13CQ8NE31 585 aa4.61□□□□□ -1.67
SMG1-212ENST00000566328 PPP1R13LQ8WUF5 828 aa4.61□□□□□ -1.67
SMG1-212ENST00000566328 JARID2Q92833 1246 aaPredicted RBP4.61□□□□□ -1.67
SMG1-212ENST00000566328 ASCC2Q9H1I8 757 aaPredicted RBP4.61□□□□□ -1.67
SMG1-212ENST00000566328 KCTD3Q9Y597 815 aa4.61□□□□□ -1.67
SMG1-212ENST00000566328 OR14I1A6ND48 311 aa4.6□□□□□ -1.67
SMG1-212ENST00000566328 PRPF40AO75400 957 aaKnown RBP4.6□□□□□ -1.67
SMG1-212ENST00000566328 SASH1O94885 1247 aa4.6□□□□□ -1.67
SMG1-212ENST00000566328 TFE3P19532 575 aaPredicted RBP4.6□□□□□ -1.67
SMG1-212ENST00000566328 NFIXQ14938 502 aa4.6□□□□□ -1.67
SMG1-212ENST00000566328 TMEM201Q5SNT2 666 aa4.6□□□□□ -1.67
SMG1-212ENST00000566328 DBX2Q6ZNG2 339 aa4.6□□□□□ -1.67
SMG1-212ENST00000566328 MARCH10Q8NA82 808 aaPredicted RBP4.6□□□□□ -1.67
SMG1-212ENST00000566328 KCNC2Q96PR1 638 aa4.6□□□□□ -1.67
SMG1-212ENST00000566328 ASPNQ9BXN1 380 aa4.6□□□□□ -1.67
SMG1-212ENST00000566328 RBM47A0AV96 593 aaKnown RBP4.59□□□□□ -1.67
SMG1-212ENST00000566328 HRKO00198 91 aa4.59□□□□□ -1.67
SMG1-212ENST00000566328 OLFML2BQ68BL8 750 aa4.59□□□□□ -1.67
SMG1-212ENST00000566328 ENOX1Q8TC92 643 aaKnown RBP4.59□□□□□ -1.67
SMG1-212ENST00000566328 LINC01599Q8WXQ3 324 aa4.59□□□□□ -1.67
SMG1-212ENST00000566328 SIGLEC10Q96LC7 697 aa4.59□□□□□ -1.67
SMG1-212ENST00000566328 CCDC74BQ96LY2 380 aa4.59□□□□□ -1.67
SMG1-212ENST00000566328 GCM1Q9NP62 436 aa4.59□□□□□ -1.67
SMG1-212ENST00000566328 SIRT5Q9NXA8 310 aa4.59□□□□□ -1.67
SMG1-212ENST00000566328 IRAK3Q9Y616 596 aa4.59□□□□□ -1.67
SMG1-212ENST00000566328 UPK3BL1B0FP48 263 aa4.58□□□□□ -1.68
SMG1-212ENST00000566328 UPK3BL2E5RIL1 263 aa4.58□□□□□ -1.68
SMG1-212ENST00000566328 PSPNO60542 156 aa4.58□□□□□ -1.68
SMG1-212ENST00000566328 TEKQ02763 1124 aa4.58□□□□□ -1.68
SMG1-212ENST00000566328 SLC14A2Q15849 920 aa4.58□□□□□ -1.68
SMG1-212ENST00000566328 ADGRF1Q5T601 910 aa4.58□□□□□ -1.68
SMG1-212ENST00000566328 RNF111Q6ZNA4 994 aa4.58□□□□□ -1.68
SMG1-212ENST00000566328 KREMEN1Q96MU8 473 aa4.58□□□□□ -1.68
SMG1-212ENST00000566328 NOC4LQ9BVI4 516 aaKnown RBP4.58□□□□□ -1.68
SMG1-212ENST00000566328 SGPP1Q9BX95 441 aa4.58□□□□□ -1.68
SMG1-212ENST00000566328 A0A0G2JLL6 359 aaPredicted RBP4.57□□□□□ -1.68
SMG1-212ENST00000566328 LRRN2O75325 713 aa4.57□□□□□ -1.68
SMG1-212ENST00000566328 ST13P50502 369 aaKnown RBP4.57□□□□□ -1.68
SMG1-212ENST00000566328 SRSF3P84103 164 aaKnown RBP4.57□□□□□ -1.68
SMG1-212ENST00000566328 KCNA1Q09470 495 aa4.57□□□□□ -1.68
SMG1-212ENST00000566328 TAF1CQ15572 869 aaPredicted RBP4.57□□□□□ -1.68
SMG1-212ENST00000566328 ERICH6Q7L0X2 663 aa4.57□□□□□ -1.68
SMG1-212ENST00000566328 CXorf38Q8TB03 319 aa4.57□□□□□ -1.68
SMG1-212ENST00000566328 SHISA4Q96DD7 197 aa4.57□□□□□ -1.68
SMG1-212ENST00000566328 CRTAC1Q9NQ79 661 aa4.57□□□□□ -1.68
SMG1-212ENST00000566328 RTEL1Q9NZ71 1219 aa4.57□□□□□ -1.68
SMG1-212ENST00000566328 ZMYM5Q9UJ78 669 aa4.57□□□□□ -1.68
SMG1-212ENST00000566328 TLR6Q9Y2C9 796 aa4.57□□□□□ -1.68
SMG1-212ENST00000566328 CORINQ9Y5Q5 1042 aa4.57□□□□□ -1.68
SMG1-212ENST00000566328 SSU72P8A0A1W2PR75 194 aa4.56□□□□□ -1.68
SMG1-212ENST00000566328 ABLIM1O14639 778 aa4.56□□□□□ -1.68
SMG1-212ENST00000566328 CILPO75339 1184 aa4.56□□□□□ -1.68
SMG1-212ENST00000566328 RPL10P27635 214 aaKnown RBP4.56□□□□□ -1.68
SMG1-212ENST00000566328 KIR2DL1P43626 348 aaPredicted RBP4.56□□□□□ -1.68
SMG1-212ENST00000566328 KIR2DL2P43627 348 aaPredicted RBP4.56□□□□□ -1.68
SMG1-212ENST00000566328 AFF3P51826 1226 aaKnown RBP4.56□□□□□ -1.68
SMG1-212ENST00000566328 SSPNQ14714 243 aa4.56□□□□□ -1.68
SMG1-212ENST00000566328 NLRX1Q86UT6 975 aa4.56□□□□□ -1.68
SMG1-212ENST00000566328 PHACTR4Q8IZ21 702 aa4.56□□□□□ -1.68
SMG1-212ENST00000566328 PHC3Q8NDX5 983 aa4.56□□□□□ -1.68
SMG1-212ENST00000566328 BORCS6Q96GS4 357 aa4.56□□□□□ -1.68
SMG1-212ENST00000566328 ZNF281Q9Y2X9 895 aa4.56□□□□□ -1.68
SMG1-212ENST00000566328 IVNS1ABPQ9Y6Y0 642 aa4.56□□□□□ -1.68
SMG1-212ENST00000566328 PRR36Q9H6K5 1346 aa4.55□□□□□ -1.68
SMG1-212ENST00000566328 RBAK-RBAKDNI3L0D1 243 aa4.55□□□□□ -1.68
SMG1-212ENST00000566328 N4BP3O15049 544 aa4.55□□□□□ -1.68
SMG1-212ENST00000566328 NRDCO43847 1150 aa4.55□□□□□ -1.68
SMG1-212ENST00000566328 TRIM13O60858 407 aa4.55□□□□□ -1.68
SMG1-212ENST00000566328 PI3P19957 117 aa4.55□□□□□ -1.68
SMG1-212ENST00000566328 GBP1P32455 592 aa4.55□□□□□ -1.68
SMG1-212ENST00000566328 PCBP3P57721 371 aaKnown RBP4.55□□□□□ -1.68
SMG1-212ENST00000566328 RNF4P78317 190 aa4.55□□□□□ -1.68
SMG1-212ENST00000566328 LMNB2Q03252 620 aa4.55□□□□□ -1.68
SMG1-212ENST00000566328 TMEM62Q0P6H9 643 aa4.55□□□□□ -1.68
SMG1-212ENST00000566328 NMIQ13287 307 aaPredicted RBP4.55□□□□□ -1.68
SMG1-212ENST00000566328 MLECQ14165 292 aa4.55□□□□□ -1.68
SMG1-212ENST00000566328 EAPPQ56P03 285 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms