RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 MYH8P13535 1937 aa10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 A0A1W2PQ27 194 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 A0A1W2PQ64 194 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 A0A1W2PQD8 194 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 PALM3A6NDB9 673 aaPredicted RBP10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 GOLGA6L3A6NEY3 463 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 SNHG28P0DPA3 235 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 RPS12P25398 132 aaKnown RBP10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 MRE11P49959 708 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 SAFBQ15424 915 aaKnown RBP eCLIP10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 ZSCAN23Q3MJ62 389 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 CFAP100Q494V2 611 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 CCDC183Q5T5S1 534 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 CAVIN1Q6NZI2 390 aaKnown RBP10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 TATDN1Q6P1N9 297 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 STK11IPQ8N1F8 1099 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 SLC44A5Q8NCS7 719 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 KCNG4Q8TDN1 519 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 USP28Q96RU2 1077 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 TMEM47Q9BQJ4 181 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 SPZ1Q9BXG8 430 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 GDPD2Q9HCC8 539 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 MTMR4Q9NYA4 1195 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 PI4KBQ9UBF8 816 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 FAM198AQ9UFP1 575 aa10.25□□□□□ -0.77
LSM3P5-201ENST00000566307 KIF28PB7ZC32 967 aa10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 hCG_1984214I3L0E3 225 aa10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 PSMD14O00487 310 aa10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 NMT2O60551 498 aa10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 DTNBO60941 627 aa10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 SHMT1P34896 483 aa10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 NFIAQ12857 509 aa10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 TNIP1Q15025 636 aa10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 R3HDM1Q15032 1099 aaKnown RBP10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 PFKFB3Q16875 520 aaPredicted RBP10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 FAM173BQ6P4H8 233 aa10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 CCDC144CPQ8IYA2 1237 aa10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 OGFOD1Q8N543 542 aa10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 SRBD1Q8N5C6 995 aaKnown RBP10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 ZNF713Q8N859 430 aaPredicted RBP10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 LINC00301Q8NCQ3 95 aa10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 PHF20Q9BVI0 1012 aa10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 ZNF277Q9NRM2 450 aaPredicted RBP10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 DDX19AQ9NUU7 478 aaKnown RBP10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 TMOD2Q9NZR1 351 aa10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 MAD2L2Q9UI95 211 aa10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 HERC5Q9UII4 1024 aaKnown RBP10.24□□□□□ -0.77
LSM3P5-201ENST00000566307 GOLGA6L4A6NEF3 574 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 NFKBIEO00221 500 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 PPP6R2O75170 966 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 PLEKHA8P1O95397 391 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 SCG2P13521 617 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 GUCY1A2P33402 732 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 GUCY1B3Q02153 619 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 PICALMQ13492 652 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 SLC39A14Q15043 492 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 FOXD4L6Q3SYB3 417 aaPredicted RBP10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 RILPL1Q5EBL4 403 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 ADALQ6DHV7 355 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 CIAPIN1Q6FI81 312 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 OTUD7BQ6GQQ9 843 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 GALNT17Q6IS24 598 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 LRSAM1Q6UWE0 723 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 FOXD4L3Q6VB84 417 aaPredicted RBP10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 RBM43Q6ZSC3 357 aaKnown RBP10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 FAM83AQ86UY5 434 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 NOSTRINQ8IVI9 506 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 DIS3L2Q8IYB7 885 aaKnown RBP10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 JMYQ8N9B5 988 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 JDP2Q8WYK2 163 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 MKL1Q969V6 931 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 CEP95Q96GE4 821 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 PGBD1Q96JS3 809 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 AIFM3Q96NN9 605 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 GZF1Q9H116 711 aaPredicted RBP10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 WDR70Q9NW82 654 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 NYAP2Q9P242 653 aa10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 TFIP11Q9UBB9 837 aaKnown RBP10.23□□□□□ -0.77
LSM3P5-201ENST00000566307 FAM237AA0A1B0GTK4 181 aa10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 TBC1D12O60347 775 aa10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 TTLL1O95922 423 aa10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 BMP15O95972 392 aa10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 AKR1B1P15121 316 aa10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 CALML3P27482 149 aa10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 TRAPPC10P48553 1259 aa10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 ZNF280AP59817 542 aaPredicted RBP10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 CXCL9Q07325 125 aa10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 DLGAP5Q15398 846 aa10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 ASPRV1Q53RT3 343 aa10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 ANO1Q5XXA6 986 aa10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 SH3BP5LQ7L8J4 393 aa10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 DAGLBQ8NCG7 672 aa10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 FAM151AQ8WW52 585 aa10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 DPF2Q92785 391 aa10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 RIOX1Q9H6W3 641 aa10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 DNAJC18Q9H819 358 aa10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 BRMS1Q9HCU9 246 aa10.22□□□□□ -0.77
LSM3P5-201ENST00000566307 STX8Q9UNK0 236 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms