RNA–Protein interactions for RNA: ENST00000565821.1

CYCSP39-201, Transcript of cytochrome c, somatic pseudogene 39, humanhuman

BASIC

Gene CYCSP39, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP39-201ENST00000565821 CDK8P49336 464 aa4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 PDE4BQ07343 736 aa4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 INPP5AQ14642 412 aa4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 NBPF6Q5VWK0 638 aa4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 LRFN4Q6PJG9 635 aa4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 C12orf40Q86WS4 652 aa4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 NALCNQ8IZF0 1738 aa4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 FAM177A1Q8N128 213 aaPredicted RBP4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 DTWD1Q8N5C7 304 aa4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 GALNT11Q8NCW6 608 aa4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 OR6P1Q8NGX9 317 aa4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 HNRNPLLQ8WVV9 542 aaKnown RBP4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 NBPF4Q96M43 638 aa4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 SRPK1Q96SB4 655 aaKnown RBP4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 C19orf44Q9H6X5 657 aa4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 TMA7Q9Y2S6 64 aaKnown RBP4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 SNCAIPQ9Y6H5 919 aa4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 PPLO60437 1756 aa4.25□□□□□ -1.73
CYCSP39-201ENST00000565821 NKTRP30414 1462 aaKnown RBP4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 PRR36Q9H6K5 1346 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 PIK3C2GO75747 1445 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 K7ELQ4 463 aaPredicted RBP4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 PIK3R2O00459 728 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 ZNF862O60290 1169 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 AOC2O75106 756 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 CTSBP07858 339 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 GIPRP48546 466 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 ETF1P62495 437 aaKnown RBP4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 TRIM28Q13263 835 aaKnown RBP4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 LRRFIP1Q32MZ4 808 aaKnown RBP4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 FOXD4L6Q3SYB3 417 aaPredicted RBP4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 AKAP4Q5JQC9 854 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 EXOSC6Q5RKV6 272 aaKnown RBP4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 NUTM2GQ5VZR2 741 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 LARP1BQ659C4 914 aaKnown RBP4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 GIMAP6Q6P9H5 292 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 FOXD4L3Q6VB84 417 aaPredicted RBP4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 WHAMMQ8TF30 809 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 UBASH3BQ8TF42 649 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 WDR89Q96FK6 387 aaPredicted RBP4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 SHDQ96IW2 340 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 RUSC1Q9BVN2 902 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 C14orf93Q9H972 538 aaKnown RBP4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 EHMT1Q9H9B1 1298 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 ST7Q9NRC1 585 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 KCNK4Q9NYG8 393 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 ACTR10Q9NZ32 417 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 SIRPGQ9P1W8 387 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 ZNRF3Q9ULT6 936 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 POLR3KQ9Y2Y1 108 aaPredicted RBP4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 MSH6P52701 1360 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 COL16A1Q07092 1604 aaPredicted RBP4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 NRXN1Q9ULB1 1477 aa4.24□□□□□ -1.73
CYCSP39-201ENST00000565821 DIP2AQ14689 1571 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 CCDC144AA2RUR9 1427 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 ADGRL3Q9HAR2 1447 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 A0A0A0MRY4 1105 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 ADAM11O75078 769 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 DEAF1O75398 565 aaPredicted RBP4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 HTR3BO95264 441 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 PGRP06401 933 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 DGKGP49619 791 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 ID3Q02535 119 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 RAB33AQ14088 237 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 KIF4BQ2VIQ3 1234 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 NBPF8Q3BBV2 869 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 PPM1JQ5JR12 505 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 ACAD11Q709F0 780 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 FBXO11Q86XK2 927 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 PRAM1Q96QH2 718 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 PLVAPQ9BX97 442 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 NRSN2Q9GZP1 204 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 PIF1Q9H611 641 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 CYP4F12Q9HCS2 524 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 SSU72Q9NP77 194 aaKnown RBP4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 KLHL3Q9UH77 587 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 AP4E1Q9UPM8 1137 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 CORINQ9Y5Q5 1042 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 IFT172Q9UG01 1749 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 C1orf167Q5SNV9 1468 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 ADGRB1O14514 1584 aa4.23□□□□□ -1.73
CYCSP39-201ENST00000565821 YTHDC2Q9H6S0 1430 aaKnown RBP4.22□□□□□ -1.73
CYCSP39-201ENST00000565821 FAM229AH3BQW9 127 aa4.22□□□□□ -1.73
CYCSP39-201ENST00000565821 GFRA2O00451 464 aa4.22□□□□□ -1.73
CYCSP39-201ENST00000565821 KLF4O43474 513 aa4.22□□□□□ -1.73
CYCSP39-201ENST00000565821 RNGTTO60942 597 aaKnown RBP4.22□□□□□ -1.73
CYCSP39-201ENST00000565821 ATE1O95260 518 aa4.22□□□□□ -1.73
CYCSP39-201ENST00000565821 DLGAP3O95886 979 aa4.22□□□□□ -1.73
CYCSP39-201ENST00000565821 ATF3P18847 181 aa4.22□□□□□ -1.73
CYCSP39-201ENST00000565821 CANXP27824 592 aaKnown RBP4.22□□□□□ -1.73
CYCSP39-201ENST00000565821 GRK4P32298 578 aa4.22□□□□□ -1.73
CYCSP39-201ENST00000565821 CHMP4BP1P59074 171 aa4.22□□□□□ -1.73
CYCSP39-201ENST00000565821 FXNQ16595 210 aa4.22□□□□□ -1.73
CYCSP39-201ENST00000565821 ZC3H12AQ5D1E8 599 aaKnown RBP4.22□□□□□ -1.73
CYCSP39-201ENST00000565821 PRRT3Q5FWE3 981 aa4.22□□□□□ -1.73
CYCSP39-201ENST00000565821 ZNF385CQ66K41 422 aaPredicted RBP4.22□□□□□ -1.73
CYCSP39-201ENST00000565821 FDX2Q6P4F2 183 aa4.22□□□□□ -1.73
CYCSP39-201ENST00000565821 RUFY4Q6ZNE9 571 aa4.22□□□□□ -1.73
CYCSP39-201ENST00000565821 CDC37L1Q7L3B6 337 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms