RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 ZNF274Q96GC6 653 aaPredicted RBP9.1□□□□□ -0.95
CDH1-208ENST00000565810 CLMNQ96JQ2 1002 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 SLKQ9H2G2 1235 aaPredicted RBP9.1□□□□□ -0.95
CDH1-208ENST00000565810 VCPKMTQ9H867 229 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 GPHNQ9NQX3 736 aaPredicted RBP9.1□□□□□ -0.95
CDH1-208ENST00000565810 SH2B1Q9NRF2 756 aaPredicted RBP9.1□□□□□ -0.95
CDH1-208ENST00000565810 TMOD4Q9NZQ9 345 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 ISY1Q9ULR0 285 aaKnown RBP9.1□□□□□ -0.95
CDH1-208ENST00000565810 MTMR7Q9Y216 660 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 TMX2Q9Y320 296 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 AFG3L2Q9Y4W6 797 aa9.1□□□□□ -0.95
CDH1-208ENST00000565810 DDX60LQ5H9U9 1706 aaKnown RBP9.09□□□□□ -0.95
CDH1-208ENST00000565810 CCDC196A0A1B0GTZ2 297 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 A0A1W2PRG0 241 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 GOLGA8AA7E2F4 631 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 GOLGA8BA8MQT2 603 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 F5H6K3 240 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 DHX16O60231 1041 aaKnown RBP9.09□□□□□ -0.95
CDH1-208ENST00000565810 PARP1P09874 1014 aaKnown RBP9.09□□□□□ -0.95
CDH1-208ENST00000565810 KIF5BP33176 963 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 ECE1P42892 770 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 SLC1A4P43007 532 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 GNAQP50148 359 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 METAP2P50579 478 aaKnown RBP eCLIP9.09□□□□□ -0.95
CDH1-208ENST00000565810 APLP1P51693 650 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 RCAN1P53805 252 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 EVCP57679 992 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 CACNB1Q02641 598 aaPredicted RBP9.09□□□□□ -0.95
CDH1-208ENST00000565810 KLRC3Q07444 240 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 RGMBQ6NW40 437 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 CPLX2Q6PUV4 134 aaKnown RBP9.09□□□□□ -0.95
CDH1-208ENST00000565810 PAXIP1Q6ZW49 1069 aaPredicted RBP9.09□□□□□ -0.95
CDH1-208ENST00000565810 MICU3Q86XE3 530 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 SIAH1Q8IUQ4 282 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 GMCL1P1Q8NEA9 526 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 LPAR1Q92633 364 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 CCDC102AQ96A19 550 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 MAP3K14Q99558 947 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 LARP6Q9BRS8 491 aaKnown RBP9.09□□□□□ -0.95
CDH1-208ENST00000565810 KIAA1683Q9H0B3 1180 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 SENP2Q9HC62 589 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 TSHZ2Q9NRE2 1034 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 RBM28Q9NW13 759 aaKnown RBP9.09□□□□□ -0.95
CDH1-208ENST00000565810 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.09□□□□□ -0.95
CDH1-208ENST00000565810 DAXXQ9UER7 740 aaPredicted RBP9.09□□□□□ -0.95
CDH1-208ENST00000565810 TPCN1Q9ULQ1 816 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 TLL2Q9Y6L7 1015 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 ECM29Q5VYK3 1845 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 MYH1P12882 1939 aa9.09□□□□□ -0.95
CDH1-208ENST00000565810 BAZ2AQ9UIF9 1905 aaKnown RBP9.09□□□□□ -0.95
CDH1-208ENST00000565810 FOCADQ5VW36 1801 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 CPLX1O14810 134 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 IRF6O14896 467 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 NDUFB10O96000 172 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 ZBTB48P10074 688 aaPredicted RBP9.08□□□□□ -0.96
CDH1-208ENST00000565810 BMP3P12645 472 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 PDIA3P30101 505 aaKnown RBP9.08□□□□□ -0.96
CDH1-208ENST00000565810 GTF2A2P52657 109 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 TROAPQ12815 778 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 STK3Q13188 491 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 SNAPC2Q13487 334 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 MTMR2Q13614 643 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 ZYXQ15942 572 aaKnown RBP9.08□□□□□ -0.96
CDH1-208ENST00000565810 RTN1Q16799 776 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 CCDC96Q2M329 555 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 GPATCH4Q5T3I0 446 aaKnown RBP9.08□□□□□ -0.96
CDH1-208ENST00000565810 APOA5Q6Q788 366 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 FASTKD5Q7L8L6 764 aaKnown RBP9.08□□□□□ -0.96
CDH1-208ENST00000565810 FANCBQ8NB91 859 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 DCAF4Q8WV16 495 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 WNK4Q96J92 1243 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 HHIPL1Q96JK4 782 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 LZTS2Q9BRK4 669 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 CREBZFQ9NS37 354 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 BRPF3Q9ULD4 1205 aa9.08□□□□□ -0.96
CDH1-208ENST00000565810 RBM19Q9Y4C8 960 aaKnown RBP9.08□□□□□ -0.96
CDH1-208ENST00000565810 K7ELQ4 463 aaPredicted RBP9.07□□□□□ -0.96
CDH1-208ENST00000565810 WDR46O15213 610 aaKnown RBP9.07□□□□□ -0.96
CDH1-208ENST00000565810 PFKFB2O60825 505 aa9.07□□□□□ -0.96
CDH1-208ENST00000565810 PDHBP11177 359 aa9.07□□□□□ -0.96
CDH1-208ENST00000565810 RXRAP19793 462 aa9.07□□□□□ -0.96
CDH1-208ENST00000565810 HMGCS2P54868 508 aa9.07□□□□□ -0.96
CDH1-208ENST00000565810 CCT2P78371 535 aaKnown RBP9.07□□□□□ -0.96
CDH1-208ENST00000565810 MKRN3Q13064 507 aaKnown RBP9.07□□□□□ -0.96
CDH1-208ENST00000565810 IKQ13123 557 aaPredicted RBP9.07□□□□□ -0.96
CDH1-208ENST00000565810 PABPC4Q13310 644 aaKnown RBP eCLIP9.07□□□□□ -0.96
CDH1-208ENST00000565810 GRM4Q14833 912 aa9.07□□□□□ -0.96
CDH1-208ENST00000565810 ME3Q16798 604 aa9.07□□□□□ -0.96
CDH1-208ENST00000565810 DEFB115Q30KQ5 88 aa9.07□□□□□ -0.96
CDH1-208ENST00000565810 ASPRV1Q53RT3 343 aa9.07□□□□□ -0.96
CDH1-208ENST00000565810 SH3D19Q5HYK7 790 aa9.07□□□□□ -0.96
CDH1-208ENST00000565810 SPRYD7Q5W111 196 aa9.07□□□□□ -0.96
CDH1-208ENST00000565810 RAB11FIP4Q86YS3 637 aa9.07□□□□□ -0.96
CDH1-208ENST00000565810 CCDC144CPQ8IYA2 1237 aa9.07□□□□□ -0.96
CDH1-208ENST00000565810 SPICE1Q8N0Z3 855 aa9.07□□□□□ -0.96
CDH1-208ENST00000565810 CNKSR2Q8WXI2 1034 aa9.07□□□□□ -0.96
CDH1-208ENST00000565810 GMCL1Q96IK5 515 aa9.07□□□□□ -0.96
CDH1-208ENST00000565810 TMX3Q96JJ7 454 aa9.07□□□□□ -0.96
CDH1-208ENST00000565810 C12orf42Q96LP6 360 aa9.07□□□□□ -0.96
CDH1-208ENST00000565810 MYL10Q9BUA6 226 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms