RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 ASCC2Q9H1I8 757 aaPredicted RBP11.84□□□□□ -0.51
CNOT1-208ENST00000565697 OSBPL3Q9H4L5 887 aa11.84□□□□□ -0.51
CNOT1-208ENST00000565697 SH2D4AQ9H788 454 aa11.84□□□□□ -0.51
CNOT1-208ENST00000565697 MYH8P13535 1937 aa11.84□□□□□ -0.51
CNOT1-208ENST00000565697 MINDY4BA8MYZ0 360 aa11.83□□□□□ -0.52
CNOT1-208ENST00000565697 TRIM6-TRIM34B2RNG4 842 aa11.83□□□□□ -0.52
CNOT1-208ENST00000565697 SLC3A2P08195 630 aaKnown RBP11.83□□□□□ -0.52
CNOT1-208ENST00000565697 SEPT2Q15019 361 aa11.83□□□□□ -0.52
CNOT1-208ENST00000565697 SHROOM1Q2M3G4 852 aaPredicted RBP11.83□□□□□ -0.52
CNOT1-208ENST00000565697 IFNL3Q8IZI9 196 aa11.83□□□□□ -0.52
CNOT1-208ENST00000565697 ARHGAP39Q9C0H5 1083 aa11.83□□□□□ -0.52
CNOT1-208ENST00000565697 ARHGEF10LQ9HCE6 1279 aa11.83□□□□□ -0.52
CNOT1-208ENST00000565697 HELLSQ9NRZ9 838 aa11.83□□□□□ -0.52
CNOT1-208ENST00000565697 EMILIN3Q9NT22 766 aa11.83□□□□□ -0.52
CNOT1-208ENST00000565697 SRRDQ9UH36 339 aa11.83□□□□□ -0.52
CNOT1-208ENST00000565697 CYP2D7A0A087X1C5 515 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 USP17L15C9J2P7 530 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 USP17L13C9JLJ4 530 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 USP17L11C9JVI0 530 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 USP17L18D6R9N7 530 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 USP17L22D6RA61 530 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 USP17L17D6RBQ6 530 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 USP17L19D6RCP7 530 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 USP17L20D6RJB6 530 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 TNPO2O14787 897 aaKnown RBP11.82□□□□□ -0.52
CNOT1-208ENST00000565697 GUCY1A2P33402 732 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 PSEN1P49768 467 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 RGS19P49795 217 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 IRX6P78412 446 aaPredicted RBP11.82□□□□□ -0.52
CNOT1-208ENST00000565697 ICA1Q05084 483 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 USP17L24Q0WX57 530 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 ZYXQ15942 572 aaKnown RBP11.82□□□□□ -0.52
CNOT1-208ENST00000565697 SLC9C1Q4G0N8 1177 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 PLEKHM2Q8IWE5 1019 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 SLC44A5Q8NCS7 719 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 RILPL2Q969X0 211 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 COA7Q96BR5 231 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 ARMC5Q96C12 935 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 SEC62Q99442 399 aaKnown RBP11.82□□□□□ -0.52
CNOT1-208ENST00000565697 NAPBQ9H115 298 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 KANSL2Q9H9L4 492 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 MKNK2Q9HBH9 465 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 PTCH2Q9Y6C5 1203 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 MYPNQ86TC9 1320 aa11.82□□□□□ -0.52
CNOT1-208ENST00000565697 ROBO3Q96MS0 1386 aa11.81□□□□□ -0.52
CNOT1-208ENST00000565697 AKR1B1P15121 316 aa11.81□□□□□ -0.52
CNOT1-208ENST00000565697 HERVK_113P62684 666 aa11.81□□□□□ -0.52
CNOT1-208ENST00000565697 CAP1Q01518 475 aa11.81□□□□□ -0.52
CNOT1-208ENST00000565697 PDE4BQ07343 736 aa11.81□□□□□ -0.52
CNOT1-208ENST00000565697 MCMDC2Q4G0Z9 681 aa11.81□□□□□ -0.52
CNOT1-208ENST00000565697 CATSPERGQ6ZRH7 1159 aa11.81□□□□□ -0.52
CNOT1-208ENST00000565697 ZNF444Q8N0Y2 327 aaPredicted RBP11.81□□□□□ -0.52
CNOT1-208ENST00000565697 GPRC5AQ8NFJ5 357 aa11.81□□□□□ -0.52
CNOT1-208ENST00000565697 RAET1EQ8TD07 263 aa11.81□□□□□ -0.52
CNOT1-208ENST00000565697 ACER1Q8TDN7 264 aa11.81□□□□□ -0.52
CNOT1-208ENST00000565697 LPAR1Q92633 364 aa11.81□□□□□ -0.52
CNOT1-208ENST00000565697 TRIM47Q96LD4 638 aa11.81□□□□□ -0.52
CNOT1-208ENST00000565697 P2RX7Q99572 595 aaKnown RBP11.81□□□□□ -0.52
CNOT1-208ENST00000565697 BOLA1Q9Y3E2 137 aa11.81□□□□□ -0.52
CNOT1-208ENST00000565697 HIP1O00291 1037 aa11.8□□□□□ -0.52
CNOT1-208ENST00000565697 ECM2O94769 699 aaPredicted RBP11.8□□□□□ -0.52
CNOT1-208ENST00000565697 VCAM1P19320 739 aa11.8□□□□□ -0.52
CNOT1-208ENST00000565697 MFAP1P55081 439 aaKnown RBP11.8□□□□□ -0.52
CNOT1-208ENST00000565697 GSE1Q14687 1217 aa11.8□□□□□ -0.52
CNOT1-208ENST00000565697 CCAR1Q8IX12 1150 aaKnown RBP11.8□□□□□ -0.52
CNOT1-208ENST00000565697 EPB41L4AQ9HCS5 686 aaPredicted RBP11.8□□□□□ -0.52
CNOT1-208ENST00000565697 MORF4L1Q9UBU8 362 aa11.8□□□□□ -0.52
CNOT1-208ENST00000565697 TMX2Q9Y320 296 aa11.8□□□□□ -0.52
CNOT1-208ENST00000565697 MGAMO43451 1857 aa11.8□□□□□ -0.52
CNOT1-208ENST00000565697 RASA1P20936 1047 aa11.79□□□□□ -0.52
CNOT1-208ENST00000565697 CTGFP29279 349 aa11.79□□□□□ -0.52
CNOT1-208ENST00000565697 SOX10P56693 466 aa11.79□□□□□ -0.52
CNOT1-208ENST00000565697 CCNA1P78396 465 aa11.79□□□□□ -0.52
CNOT1-208ENST00000565697 MLLT1Q03111 559 aaPredicted RBP11.79□□□□□ -0.52
CNOT1-208ENST00000565697 PPARAQ07869 468 aa11.79□□□□□ -0.52
CNOT1-208ENST00000565697 PPP4R3BQ5MIZ7 849 aa11.79□□□□□ -0.52
CNOT1-208ENST00000565697 RPAP3Q9H6T3 665 aaPredicted RBP11.79□□□□□ -0.52
CNOT1-208ENST00000565697 GOPCQ9HD26 462 aa11.79□□□□□ -0.52
CNOT1-208ENST00000565697 HOXC10Q9NYD6 342 aa11.79□□□□□ -0.52
CNOT1-208ENST00000565697 A0A1W2PRG0 241 aa11.78□□□□□ -0.52
CNOT1-208ENST00000565697 EEF2P13639 858 aaKnown RBP11.78□□□□□ -0.52
CNOT1-208ENST00000565697 SDSP20132 328 aa11.78□□□□□ -0.52
CNOT1-208ENST00000565697 MAPK4P31152 587 aa11.78□□□□□ -0.52
CNOT1-208ENST00000565697 GRK4P32298 578 aa11.78□□□□□ -0.52
CNOT1-208ENST00000565697 UBXN2AP68543 259 aa11.78□□□□□ -0.52
CNOT1-208ENST00000565697 ATP2B2Q01814 1243 aa11.78□□□□□ -0.52
CNOT1-208ENST00000565697 PRKCZQ05513 592 aa11.78□□□□□ -0.52
CNOT1-208ENST00000565697 IRF5Q13568 498 aa11.78□□□□□ -0.52
CNOT1-208ENST00000565697 COG2Q14746 738 aa11.78□□□□□ -0.52
CNOT1-208ENST00000565697 ALX1Q15699 326 aa11.78□□□□□ -0.52
CNOT1-208ENST00000565697 VARS2Q5ST30 1063 aaKnown RBP11.78□□□□□ -0.52
CNOT1-208ENST00000565697 LBX2Q6XYB7 198 aa11.78□□□□□ -0.52
CNOT1-208ENST00000565697 CCDC129Q6ZRS4 1044 aa11.78□□□□□ -0.52
CNOT1-208ENST00000565697 ZNF333Q96JL9 665 aa11.78□□□□□ -0.52
CNOT1-208ENST00000565697 VCPKMTQ9H867 229 aa11.78□□□□□ -0.52
CNOT1-208ENST00000565697 RABGAP1Q9Y3P9 1069 aa11.78□□□□□ -0.52
CNOT1-208ENST00000565697 ZSWIM8A7E2V4 1837 aa11.77□□□□□ -0.52
CNOT1-208ENST00000565697 A0A0D9SFI3 127 aa11.77□□□□□ -0.53
CNOT1-208ENST00000565697 SMIM22K7EJ46 135 aa11.77□□□□□ -0.53
CNOT1-208ENST00000565697 WDR46O15213 610 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms