RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 PDE8BO95263 885 aa10.43□□□□□ -0.74
CDH13-207ENST00000565636 CRHR2Q13324 411 aa10.43□□□□□ -0.74
CDH13-207ENST00000565636 PRKG1Q13976 671 aa10.43□□□□□ -0.74
CDH13-207ENST00000565636 KIF22Q14807 665 aa10.43□□□□□ -0.74
CDH13-207ENST00000565636 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.43□□□□□ -0.74
CDH13-207ENST00000565636 PRICKLE2Q7Z3G6 844 aa10.43□□□□□ -0.74
CDH13-207ENST00000565636 CYP2U1Q7Z449 544 aa10.43□□□□□ -0.74
CDH13-207ENST00000565636 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.43□□□□□ -0.74
CDH13-207ENST00000565636 CLMNQ96JQ2 1002 aa10.43□□□□□ -0.74
CDH13-207ENST00000565636 ZDHHC15Q96MV8 337 aa10.43□□□□□ -0.74
CDH13-207ENST00000565636 PTPN18Q99952 460 aa10.43□□□□□ -0.74
CDH13-207ENST00000565636 VEZTQ9HBM0 779 aa10.43□□□□□ -0.74
CDH13-207ENST00000565636 RPAP1Q9BWH6 1393 aaPredicted RBP10.42□□□□□ -0.74
CDH13-207ENST00000565636 PTPRCP08575 1304 aa10.42□□□□□ -0.74
CDH13-207ENST00000565636 HTTP42858 3142 aa10.42□□□□□ -0.74
CDH13-207ENST00000565636 TLR2O60603 784 aa10.42□□□□□ -0.74
CDH13-207ENST00000565636 SLURP2P0DP57 97 aa10.42□□□□□ -0.74
CDH13-207ENST00000565636 CRKP46108 304 aa10.42□□□□□ -0.74
CDH13-207ENST00000565636 PPATQ06203 517 aa10.42□□□□□ -0.74
CDH13-207ENST00000565636 RNFT1Q5M7Z0 435 aa10.42□□□□□ -0.74
CDH13-207ENST00000565636 DCAF15Q66K64 600 aa10.42□□□□□ -0.74
CDH13-207ENST00000565636 VPS37DQ86XT2 251 aa10.42□□□□□ -0.74
CDH13-207ENST00000565636 TMEM151AQ8N4L1 468 aa10.42□□□□□ -0.74
CDH13-207ENST00000565636 KDF1Q8NAX2 398 aaPredicted RBP10.42□□□□□ -0.74
CDH13-207ENST00000565636 TEKT1Q969V4 418 aa10.42□□□□□ -0.74
CDH13-207ENST00000565636 OPTNQ96CV9 577 aa10.42□□□□□ -0.74
CDH13-207ENST00000565636 TMOD2Q9NZR1 351 aa10.42□□□□□ -0.74
CDH13-207ENST00000565636 CHMP3Q9Y3E7 222 aa10.42□□□□□ -0.74
CDH13-207ENST00000565636 NDUFB9Q9Y6M9 179 aa10.42□□□□□ -0.74
CDH13-207ENST00000565636 CENPFP49454 3210 aa10.41□□□□□ -0.74
CDH13-207ENST00000565636 CLRN2A0PK11 232 aa10.41□□□□□ -0.74
CDH13-207ENST00000565636 HOXD10P28358 340 aa10.41□□□□□ -0.74
CDH13-207ENST00000565636 ERVK-9P63128 1117 aa10.41□□□□□ -0.74
CDH13-207ENST00000565636 MAP3K10Q02779 954 aa10.41□□□□□ -0.74
CDH13-207ENST00000565636 EPHA10Q5JZY3 1008 aa10.41□□□□□ -0.74
CDH13-207ENST00000565636 WDR66Q8TBY9 1149 aa10.41□□□□□ -0.74
CDH13-207ENST00000565636 ZNF333Q96JL9 665 aa10.41□□□□□ -0.74
CDH13-207ENST00000565636 TDRD3Q9H7E2 651 aaKnown RBP10.41□□□□□ -0.74
CDH13-207ENST00000565636 CEP290O15078 2479 aa10.41□□□□□ -0.74
CDH13-207ENST00000565636 MGAMO43451 1857 aa10.4□□□□□ -0.74
CDH13-207ENST00000565636 CCL15-CCL14A0A0B4J2E2 113 aa10.4□□□□□ -0.74
CDH13-207ENST00000565636 F6X3S4 739 aa10.4□□□□□ -0.74
CDH13-207ENST00000565636 F8W031 263 aaPredicted RBP10.4□□□□□ -0.74
CDH13-207ENST00000565636 ANP32CO43423 234 aa10.4□□□□□ -0.74
CDH13-207ENST00000565636 PPIL2Q13356 520 aa10.4□□□□□ -0.74
CDH13-207ENST00000565636 SNAPC2Q13487 334 aa10.4□□□□□ -0.74
CDH13-207ENST00000565636 TAF1CQ15572 869 aaPredicted RBP10.4□□□□□ -0.74
CDH13-207ENST00000565636 CCL15Q16663 113 aa10.4□□□□□ -0.74
CDH13-207ENST00000565636 HABP4Q5JVS0 413 aaKnown RBP10.4□□□□□ -0.74
CDH13-207ENST00000565636 CD99L2Q8TCZ2 262 aa10.4□□□□□ -0.74
CDH13-207ENST00000565636 KAZALD1Q96I82 304 aa10.4□□□□□ -0.74
CDH13-207ENST00000565636 MRS2Q9HD23 443 aa10.4□□□□□ -0.74
CDH13-207ENST00000565636 PRM3Q9NNZ6 103 aa10.4□□□□□ -0.74
CDH13-207ENST00000565636 ZNF112Q9UJU3 913 aa10.4□□□□□ -0.74
CDH13-207ENST00000565636 MKI67P46013 3256 aaKnown RBP10.39□□□□□ -0.75
CDH13-207ENST00000565636 A0A1W2PRU2 124 aa10.39□□□□□ -0.75
CDH13-207ENST00000565636 SNAP23O00161 211 aa10.39□□□□□ -0.75
CDH13-207ENST00000565636 PLIN1O60240 522 aa10.39□□□□□ -0.75
CDH13-207ENST00000565636 FRAT2O75474 233 aaPredicted RBP10.39□□□□□ -0.75
CDH13-207ENST00000565636 IFIT1P09914 478 aaKnown RBP10.39□□□□□ -0.75
CDH13-207ENST00000565636 GYG1P46976 350 aa10.39□□□□□ -0.75
CDH13-207ENST00000565636 MARSP56192 900 aaKnown RBP10.39□□□□□ -0.75
CDH13-207ENST00000565636 SRSF11Q05519 484 aaKnown RBP10.39□□□□□ -0.75
CDH13-207ENST00000565636 VGLL4Q14135 290 aa10.39□□□□□ -0.75
CDH13-207ENST00000565636 SLC9C1Q4G0N8 1177 aa10.39□□□□□ -0.75
CDH13-207ENST00000565636 ZNF385CQ66K41 422 aaPredicted RBP10.39□□□□□ -0.75
CDH13-207ENST00000565636 VGLL2Q8N8G2 317 aa10.39□□□□□ -0.75
CDH13-207ENST00000565636 FAM151AQ8WW52 585 aa10.39□□□□□ -0.75
CDH13-207ENST00000565636 BRI3BPQ8WY22 251 aa10.39□□□□□ -0.75
CDH13-207ENST00000565636 ZNF594Q96JF6 807 aaPredicted RBP10.39□□□□□ -0.75
CDH13-207ENST00000565636 ELP3Q9H9T3 547 aa10.39□□□□□ -0.75
CDH13-207ENST00000565636 CXCL11O14625 94 aa10.38□□□□□ -0.75
CDH13-207ENST00000565636 IGSF3O75054 1194 aa10.38□□□□□ -0.75
CDH13-207ENST00000565636 MAP4K4O95819 1239 aaPredicted RBP10.38□□□□□ -0.75
CDH13-207ENST00000565636 NBPF7P0C2Y1 421 aaPredicted RBP10.38□□□□□ -0.75
CDH13-207ENST00000565636 RHOQP17081 205 aa10.38□□□□□ -0.75
CDH13-207ENST00000565636 FGFR2P21802 821 aa10.38□□□□□ -0.75
CDH13-207ENST00000565636 LACTBP83111 547 aaPredicted RBP10.38□□□□□ -0.75
CDH13-207ENST00000565636 PUM3Q15397 648 aaKnown RBP10.38□□□□□ -0.75
CDH13-207ENST00000565636 CCDC184Q52MB2 194 aa10.38□□□□□ -0.75
CDH13-207ENST00000565636 APOBEC3HQ6NTF7 200 aaKnown RBP10.38□□□□□ -0.75
CDH13-207ENST00000565636 RIPOR1Q6ZS17 1223 aa10.38□□□□□ -0.75
CDH13-207ENST00000565636 ANKRD23Q86SG2 305 aa10.38□□□□□ -0.75
CDH13-207ENST00000565636 LPIN2Q92539 896 aa10.38□□□□□ -0.75
CDH13-207ENST00000565636 ZNF341Q9BYN7 854 aa10.38□□□□□ -0.75
CDH13-207ENST00000565636 ENAMQ9NRM1 1142 aa10.38□□□□□ -0.75
CDH13-207ENST00000565636 KCNH4Q9UQ05 1017 aa10.38□□□□□ -0.75
CDH13-207ENST00000565636 PCDHB11Q9Y5F2 797 aa10.38□□□□□ -0.75
CDH13-207ENST00000565636 PCDHAC2Q9Y5I4 1007 aa10.38□□□□□ -0.75
CDH13-207ENST00000565636 MYH2Q9UKX2 1941 aa10.38□□□□□ -0.75
CDH13-207ENST00000565636 SALL1Q9NSC2 1324 aa10.37□□□□□ -0.75
CDH13-207ENST00000565636 TCP10L2B9ZVM9 353 aa10.37□□□□□ -0.75
CDH13-207ENST00000565636 GDF11O95390 407 aa10.37□□□□□ -0.75
CDH13-207ENST00000565636 CT47B1P0C2W7 299 aaPredicted RBP10.37□□□□□ -0.75
CDH13-207ENST00000565636 ZEB1P37275 1124 aaPredicted RBP10.37□□□□□ -0.75
CDH13-207ENST00000565636 ALDH1L2Q3SY69 923 aa10.37□□□□□ -0.75
CDH13-207ENST00000565636 METTL24Q5JXM2 366 aa10.37□□□□□ -0.75
CDH13-207ENST00000565636 NOL9Q5SY16 702 aaKnown RBP10.37□□□□□ -0.75
CDH13-207ENST00000565636 SLC4A10Q6U841 1118 aa10.37□□□□□ -0.75
CDH13-207ENST00000565636 C17orf99Q6UX52 265 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms