RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 ARPP21Q9UBL0 812 aaPredicted RBP13.12□□□□□ -0.31
NSMCE1-210ENST00000565626 TMX2Q9Y320 296 aa13.12□□□□□ -0.31
NSMCE1-210ENST00000565626 PLXNB2O15031 1838 aa13.11□□□□□ -0.31
NSMCE1-210ENST00000565626 APPP05067 770 aa13.11□□□□□ -0.31
NSMCE1-210ENST00000565626 RASA1P20936 1047 aa13.11□□□□□ -0.31
NSMCE1-210ENST00000565626 CCL14Q16627 93 aa13.11□□□□□ -0.31
NSMCE1-210ENST00000565626 SBK1Q52WX2 424 aa13.11□□□□□ -0.31
NSMCE1-210ENST00000565626 MORN1Q5T089 497 aa13.11□□□□□ -0.31
NSMCE1-210ENST00000565626 WDR78Q5VTH9 848 aa13.11□□□□□ -0.31
NSMCE1-210ENST00000565626 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
NSMCE1-210ENST00000565626 LBX2Q6XYB7 198 aa13.11□□□□□ -0.31
NSMCE1-210ENST00000565626 GTF3C2Q8WUA4 911 aaPredicted RBP13.11□□□□□ -0.31
NSMCE1-210ENST00000565626 SOCS4Q8WXH5 440 aa13.11□□□□□ -0.31
NSMCE1-210ENST00000565626 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.11□□□□□ -0.31
NSMCE1-210ENST00000565626 ARHGEF10LQ9HCE6 1279 aa13.11□□□□□ -0.31
NSMCE1-210ENST00000565626 PRDM1O75626 825 aa13.1□□□□□ -0.31
NSMCE1-210ENST00000565626 FARP2O94887 1054 aaPredicted RBP13.1□□□□□ -0.31
NSMCE1-210ENST00000565626 TFRCP02786 760 aaKnown RBP13.1□□□□□ -0.31
NSMCE1-210ENST00000565626 TDO2P48775 406 aa13.1□□□□□ -0.31
NSMCE1-210ENST00000565626 COG2Q14746 738 aa13.1□□□□□ -0.31
NSMCE1-210ENST00000565626 ZMYM1Q5SVZ6 1142 aa13.1□□□□□ -0.31
NSMCE1-210ENST00000565626 GIMAP6Q6P9H5 292 aa13.1□□□□□ -0.31
NSMCE1-210ENST00000565626 CCDC129Q6ZRS4 1044 aa13.1□□□□□ -0.31
NSMCE1-210ENST00000565626 EXOC6Q8TAG9 804 aa13.1□□□□□ -0.31
NSMCE1-210ENST00000565626 LNPKQ9C0E8 428 aa13.1□□□□□ -0.31
NSMCE1-210ENST00000565626 VCPKMTQ9H867 229 aa13.1□□□□□ -0.31
NSMCE1-210ENST00000565626 CWC22Q9HCG8 908 aaKnown RBP13.1□□□□□ -0.31
NSMCE1-210ENST00000565626 FBXO28Q9NVF7 368 aa13.1□□□□□ -0.31
NSMCE1-210ENST00000565626 PATL2C9JE40 543 aaKnown RBP13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 FLOT1O75955 427 aa13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 XRCC5P13010 732 aaKnown RBP13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 PRKAR2AP13861 404 aaKnown RBP13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 PDE1AP54750 535 aa13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 CCNA1P78396 465 aa13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 B4GALNT3Q6L9W6 998 aa13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 IFNL3Q8IZI9 196 aa13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 DIS3LQ8TF46 1054 aaKnown RBP13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 LPAR1Q92633 364 aa13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 GCC1Q96CN9 775 aa13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 ATG4CQ96DT6 458 aa13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 MOV10L1Q9BXT6 1211 aaKnown RBP13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 CRISPLD2Q9H0B8 497 aa13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 KANSL2Q9H9L4 492 aa13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 MKNK2Q9HBH9 465 aa13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 HOXC10Q9NYD6 342 aa13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 STAP2Q9UGK3 403 aa13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 RPTORQ8N122 1335 aa13.09□□□□□ -0.31
NSMCE1-210ENST00000565626 TRIOBPQ9H2D6 2365 aa13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 H0YGN5 161 aa13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 FOXP2O15409 715 aa13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 RAD21O60216 631 aa13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 IGHDP01880 384 aa13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 ZKSCAN1P17029 563 aaPredicted RBP13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 GNAT2P19087 354 aa13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 PTPREP23469 700 aa13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 DSG3P32926 999 aa13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 RGS2P41220 211 aa13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 CACNB2Q08289 660 aaPredicted RBP13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 MAP2K5Q13163 448 aa13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 LRRFIP1Q32MZ4 808 aaKnown RBP13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 MAP3K21Q5TCX8 1036 aa13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 DPF3Q92784 378 aa13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 NUP88Q99567 741 aaPredicted RBP13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 SH2D4AQ9H788 454 aa13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 HMX1Q9NP08 348 aaPredicted RBP13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 FLRT1Q9NZU1 646 aa13.08□□□□□ -0.32
NSMCE1-210ENST00000565626 MYH8P13535 1937 aa13.07□□□□□ -0.32
NSMCE1-210ENST00000565626 ROBO3Q96MS0 1386 aa13.07□□□□□ -0.32
NSMCE1-210ENST00000565626 WDR46O15213 610 aaKnown RBP13.07□□□□□ -0.32
NSMCE1-210ENST00000565626 CCND3P30281 292 aaPredicted RBP13.07□□□□□ -0.32
NSMCE1-210ENST00000565626 PLS1Q14651 629 aa13.07□□□□□ -0.32
NSMCE1-210ENST00000565626 FAM83BQ5T0W9 1011 aa13.07□□□□□ -0.32
NSMCE1-210ENST00000565626 VPS53Q5VIR6 699 aa13.07□□□□□ -0.32
NSMCE1-210ENST00000565626 PAWRQ96IZ0 340 aaKnown RBP13.07□□□□□ -0.32
NSMCE1-210ENST00000565626 APBA2Q99767 749 aa13.07□□□□□ -0.32
NSMCE1-210ENST00000565626 SPATC1LQ9H0A9 340 aa13.07□□□□□ -0.32
NSMCE1-210ENST00000565626 RLFQ13129 1914 aa13.07□□□□□ -0.32
NSMCE1-210ENST00000565626 IGKV6D-41A0A0C4DH26 115 aa13.06□□□□□ -0.32
NSMCE1-210ENST00000565626 SLC15A5A6NIM6 579 aa13.06□□□□□ -0.32
NSMCE1-210ENST00000565626 SLC34A2O95436 690 aa13.06□□□□□ -0.32
NSMCE1-210ENST00000565626 ERCC3P19447 782 aa13.06□□□□□ -0.32
NSMCE1-210ENST00000565626 MNX1P50219 401 aaPredicted RBP13.06□□□□□ -0.32
NSMCE1-210ENST00000565626 GRB14Q14449 540 aa13.06□□□□□ -0.32
NSMCE1-210ENST00000565626 TMEM132BQ14DG7 1078 aa13.06□□□□□ -0.32
NSMCE1-210ENST00000565626 SMC5Q8IY18 1101 aa13.06□□□□□ -0.32
NSMCE1-210ENST00000565626 NPLOC4Q8TAT6 608 aa13.06□□□□□ -0.32
NSMCE1-210ENST00000565626 EVI5LQ96CN4 794 aa13.06□□□□□ -0.32
NSMCE1-210ENST00000565626 FAM227BQ96M60 508 aa13.06□□□□□ -0.32
NSMCE1-210ENST00000565626 NACAP1Q9BZK3 213 aa13.06□□□□□ -0.32
NSMCE1-210ENST00000565626 NAPBQ9H115 298 aa13.06□□□□□ -0.32
NSMCE1-210ENST00000565626 INCENPQ9NQS7 918 aa13.06□□□□□ -0.32
NSMCE1-210ENST00000565626 LAMA3Q16787 3333 aa13.05□□□□□ -0.32
NSMCE1-210ENST00000565626 SZT2Q5T011 3432 aa13.05□□□□□ -0.32
NSMCE1-210ENST00000565626 NDUFB10O96000 172 aa13.05□□□□□ -0.32
NSMCE1-210ENST00000565626 ADORA2AP29274 412 aa13.05□□□□□ -0.32
NSMCE1-210ENST00000565626 CYP2C19P33261 490 aa13.05□□□□□ -0.32
NSMCE1-210ENST00000565626 PPARAQ07869 468 aa13.05□□□□□ -0.32
NSMCE1-210ENST00000565626 FAM47AQ5JRC9 791 aa13.05□□□□□ -0.32
NSMCE1-210ENST00000565626 NCAPG2Q86XI2 1143 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms