RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 HS2ST1Q7LGA3 356 aa7.22□□□□□ -1.25
CHD9-215ENST00000565442 CREG2Q8IUH2 290 aa7.22□□□□□ -1.25
CHD9-215ENST00000565442 HID1Q8IV36 788 aa7.22□□□□□ -1.25
CHD9-215ENST00000565442 PIWIL2Q8TC59 973 aaKnown RBP7.22□□□□□ -1.25
CHD9-215ENST00000565442 PLPPR2Q96GM1 343 aa7.22□□□□□ -1.25
CHD9-215ENST00000565442 SP110Q9HB58 689 aa7.22□□□□□ -1.25
CHD9-215ENST00000565442 GGT7Q9UJ14 662 aa7.22□□□□□ -1.25
CHD9-215ENST00000565442 CYP8B1Q9UNU6 501 aa7.22□□□□□ -1.25
CHD9-215ENST00000565442 MYOCOSA0A1B0GUC4 107 aa7.21□□□□□ -1.26
CHD9-215ENST00000565442 F6X3S4 739 aa7.21□□□□□ -1.26
CHD9-215ENST00000565442 PEX10O60683 326 aa7.21□□□□□ -1.26
CHD9-215ENST00000565442 CST3P01034 146 aaPredicted RBP7.21□□□□□ -1.26
CHD9-215ENST00000565442 CELA3AP09093 270 aa7.21□□□□□ -1.26
CHD9-215ENST00000565442 MAP3K11Q16584 847 aa7.21□□□□□ -1.26
CHD9-215ENST00000565442 ZNF394Q53GI3 561 aa7.21□□□□□ -1.26
CHD9-215ENST00000565442 TCERG1LQ5VWI1 586 aa7.21□□□□□ -1.26
CHD9-215ENST00000565442 ZNF605Q86T29 641 aa7.21□□□□□ -1.26
CHD9-215ENST00000565442 LILRA2Q8N149 483 aa7.21□□□□□ -1.26
CHD9-215ENST00000565442 PDZD8Q8NEN9 1154 aa7.21□□□□□ -1.26
CHD9-215ENST00000565442 XAGE3Q8WTP9 111 aa7.21□□□□□ -1.26
CHD9-215ENST00000565442 CNOT6Q9ULM6 557 aaKnown RBP7.21□□□□□ -1.26
CHD9-215ENST00000565442 PCDHGB7Q9Y5F8 929 aa7.21□□□□□ -1.26
CHD9-215ENST00000565442 PTPN11Q06124 597 aaPredicted RBP7.2□□□□□ -1.26
CHD9-215ENST00000565442 RAD51AP2Q09MP3 1159 aa7.2□□□□□ -1.26
CHD9-215ENST00000565442 PCNX4Q63HM2 1172 aa7.2□□□□□ -1.26
CHD9-215ENST00000565442 MARCH10Q8NA82 808 aaPredicted RBP7.2□□□□□ -1.26
CHD9-215ENST00000565442 NOC4LQ9BVI4 516 aaKnown RBP7.2□□□□□ -1.26
CHD9-215ENST00000565442 C19orf44Q9H6X5 657 aa7.2□□□□□ -1.26
CHD9-215ENST00000565442 COPRSQ9NQ92 184 aa7.2□□□□□ -1.26
CHD9-215ENST00000565442 RTEL1Q9NZ71 1219 aa7.2□□□□□ -1.26
CHD9-215ENST00000565442 WASH4PA8MWX3 477 aa7.19□□□□□ -1.26
CHD9-215ENST00000565442 SV2BQ7L1I2 683 aa7.19□□□□□ -1.26
CHD9-215ENST00000565442 CDH24Q86UP0 819 aa7.19□□□□□ -1.26
CHD9-215ENST00000565442 ANKRD24Q8TF21 1146 aa7.19□□□□□ -1.26
CHD9-215ENST00000565442 TRIM13O60858 407 aa7.18□□□□□ -1.26
CHD9-215ENST00000565442 TPP2P29144 1249 aaPredicted RBP7.18□□□□□ -1.26
CHD9-215ENST00000565442 GAB4Q2WGN9 574 aa7.18□□□□□ -1.26
CHD9-215ENST00000565442 ZNF385BQ569K4 471 aa7.18□□□□□ -1.26
CHD9-215ENST00000565442 WIPI1Q5MNZ9 446 aaPredicted RBP7.18□□□□□ -1.26
CHD9-215ENST00000565442 TMEM132EQ6IEE7 984 aa7.18□□□□□ -1.26
CHD9-215ENST00000565442 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.18□□□□□ -1.26
CHD9-215ENST00000565442 ERMP1Q7Z2K6 904 aa7.18□□□□□ -1.26
CHD9-215ENST00000565442 USP48Q86UV5 1035 aa7.18□□□□□ -1.26
CHD9-215ENST00000565442 OXR1Q8N573 874 aa7.18□□□□□ -1.26
CHD9-215ENST00000565442 CWC22Q9HCG8 908 aaKnown RBP7.18□□□□□ -1.26
CHD9-215ENST00000565442 KBTBD4Q9NVX7 518 aa7.18□□□□□ -1.26
CHD9-215ENST00000565442 KCTD3Q9Y597 815 aa7.18□□□□□ -1.26
CHD9-215ENST00000565442 SNCAIPQ9Y6H5 919 aa7.18□□□□□ -1.26
CHD9-215ENST00000565442 TEX51A0A1B0GUA7 166 aa7.17□□□□□ -1.26
CHD9-215ENST00000565442 MINDY4BA8MYZ0 360 aa7.17□□□□□ -1.26
CHD9-215ENST00000565442 RFXAPO00287 272 aa7.17□□□□□ -1.26
CHD9-215ENST00000565442 ZGLP1P0C6A0 271 aa7.17□□□□□ -1.26
CHD9-215ENST00000565442 RACK1P63244 317 aaKnown RBP7.17□□□□□ -1.26
CHD9-215ENST00000565442 TIGD5Q53EQ6 642 aa7.17□□□□□ -1.26
CHD9-215ENST00000565442 CXorf38Q8TB03 319 aa7.17□□□□□ -1.26
CHD9-215ENST00000565442 GAL3ST3Q96A11 431 aa7.17□□□□□ -1.26
CHD9-215ENST00000565442 INTS4Q96HW7 963 aaKnown RBP7.17□□□□□ -1.26
CHD9-215ENST00000565442 DUSP15Q9H1R2 295 aaPredicted RBP7.17□□□□□ -1.26
CHD9-215ENST00000565442 TRIT1Q9H3H1 467 aaKnown RBP7.17□□□□□ -1.26
CHD9-215ENST00000565442 GCM1Q9NP62 436 aa7.17□□□□□ -1.26
CHD9-215ENST00000565442 DDX41Q9UJV9 622 aaKnown RBP7.17□□□□□ -1.26
CHD9-215ENST00000565442 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.17□□□□□ -1.26
CHD9-215ENST00000565442 ADAMTS20P59510 1910 aa7.17□□□□□ -1.26
CHD9-215ENST00000565442 FITM1A5D6W6 292 aa7.16□□□□□ -1.26
CHD9-215ENST00000565442 GRK4P32298 578 aa7.16□□□□□ -1.26
CHD9-215ENST00000565442 GBP2P32456 591 aaPredicted RBP7.16□□□□□ -1.26
CHD9-215ENST00000565442 KRTAP10-2P60368 255 aa7.16□□□□□ -1.26
CHD9-215ENST00000565442 TTBK2Q6IQ55 1244 aa7.16□□□□□ -1.26
CHD9-215ENST00000565442 RELL1Q8IUW5 271 aa7.16□□□□□ -1.26
CHD9-215ENST00000565442 TMEM151BQ8IW70 566 aa7.16□□□□□ -1.26
CHD9-215ENST00000565442 Q96M66 194 aa7.16□□□□□ -1.26
CHD9-215ENST00000565442 RSRP1Q9BUV0 290 aa7.16□□□□□ -1.26
CHD9-215ENST00000565442 TGIF2Q9GZN2 237 aa7.16□□□□□ -1.26
CHD9-215ENST00000565442 ACBD3Q9H3P7 528 aa7.16□□□□□ -1.26
CHD9-215ENST00000565442 ZNF552Q9H707 407 aaPredicted RBP7.16□□□□□ -1.26
CHD9-215ENST00000565442 CCSER2Q9H7U1 834 aa7.16□□□□□ -1.26
CHD9-215ENST00000565442 DUSP13Q9UII6 198 aa7.16□□□□□ -1.26
CHD9-215ENST00000565442 TLR6Q9Y2C9 796 aa7.16□□□□□ -1.26
CHD9-215ENST00000565442 YBX2Q9Y2T7 364 aaKnown RBP7.16□□□□□ -1.26
CHD9-215ENST00000565442 ETV3P41162 512 aa7.15□□□□□ -1.26
CHD9-215ENST00000565442 CDK8P49336 464 aa7.15□□□□□ -1.26
CHD9-215ENST00000565442 LIG3P49916 1009 aa7.15□□□□□ -1.26
CHD9-215ENST00000565442 EGR3Q06889 387 aa7.15□□□□□ -1.26
CHD9-215ENST00000565442 NR0B2Q15466 257 aa7.15□□□□□ -1.26
CHD9-215ENST00000565442 SKOR2Q2VWA4 1001 aaPredicted RBP7.15□□□□□ -1.26
CHD9-215ENST00000565442 PRRT2Q7Z6L0 340 aaPredicted RBP7.15□□□□□ -1.26
CHD9-215ENST00000565442 ZNF654Q8IZM8 581 aa7.15□□□□□ -1.26
CHD9-215ENST00000565442 SGPP1Q9BX95 441 aa7.15□□□□□ -1.26
CHD9-215ENST00000565442 RLBP1P12271 317 aa7.14□□□□□ -1.27
CHD9-215ENST00000565442 PDE6BP35913 854 aa7.14□□□□□ -1.27
CHD9-215ENST00000565442 TNNI2P48788 182 aa7.14□□□□□ -1.27
CHD9-215ENST00000565442 ZC3H6P61129 1189 aaKnown RBP7.14□□□□□ -1.27
CHD9-215ENST00000565442 TMEM74Q96NL1 305 aa7.14□□□□□ -1.27
CHD9-215ENST00000565442 PWP1Q13610 501 aa7.13□□□□□ -1.27
CHD9-215ENST00000565442 SSPNQ14714 243 aa7.13□□□□□ -1.27
CHD9-215ENST00000565442 NAALADL2Q58DX5 795 aa7.13□□□□□ -1.27
CHD9-215ENST00000565442 GGNQ86UU5 652 aa7.13□□□□□ -1.27
CHD9-215ENST00000565442 MRPL41Q8IXM3 137 aaKnown RBP7.13□□□□□ -1.27
CHD9-215ENST00000565442 PHC3Q8NDX5 983 aa7.13□□□□□ -1.27
CHD9-215ENST00000565442 DHX38Q92620 1227 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms