RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 ROBO3Q96MS0 1386 aa12.04□□□□□ -0.48
CMTM3-209ENST00000565003 A0A0G2JMZ2 1700 aa12.03□□□□□ -0.48
CMTM3-209ENST00000565003 ERC2O15083 957 aa12.03□□□□□ -0.48
CMTM3-209ENST00000565003 GLRX3O76003 335 aaKnown RBP12.03□□□□□ -0.48
CMTM3-209ENST00000565003 XRCC5P13010 732 aaKnown RBP12.03□□□□□ -0.48
CMTM3-209ENST00000565003 MX1P20591 662 aa12.03□□□□□ -0.48
CMTM3-209ENST00000565003 CCL14Q16627 93 aa12.03□□□□□ -0.48
CMTM3-209ENST00000565003 SBK1Q52WX2 424 aa12.03□□□□□ -0.48
CMTM3-209ENST00000565003 GIMAP6Q6P9H5 292 aa12.03□□□□□ -0.48
CMTM3-209ENST00000565003 CCAR1Q8IX12 1150 aaKnown RBP12.03□□□□□ -0.48
CMTM3-209ENST00000565003 STK11IPQ8N1F8 1099 aa12.03□□□□□ -0.48
CMTM3-209ENST00000565003 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.03□□□□□ -0.48
CMTM3-209ENST00000565003 CRISPLD2Q9H0B8 497 aa12.03□□□□□ -0.48
CMTM3-209ENST00000565003 RPTORQ8N122 1335 aa12.03□□□□□ -0.48
CMTM3-209ENST00000565003 GREB1LQ9C091 1923 aaPredicted RBP12.03□□□□□ -0.48
CMTM3-209ENST00000565003 H0YGN5 161 aa12.02□□□□□ -0.49
CMTM3-209ENST00000565003 TFRCP02786 760 aaKnown RBP12.02□□□□□ -0.49
CMTM3-209ENST00000565003 EEF2P13639 858 aaKnown RBP12.02□□□□□ -0.49
CMTM3-209ENST00000565003 PRKAR2AP13861 404 aaKnown RBP12.02□□□□□ -0.49
CMTM3-209ENST00000565003 ZKSCAN1P17029 563 aaPredicted RBP12.02□□□□□ -0.49
CMTM3-209ENST00000565003 RASA1P20936 1047 aa12.02□□□□□ -0.49
CMTM3-209ENST00000565003 RGS2P41220 211 aa12.02□□□□□ -0.49
CMTM3-209ENST00000565003 CCNA1P78396 465 aa12.02□□□□□ -0.49
CMTM3-209ENST00000565003 MAP2K5Q13163 448 aa12.02□□□□□ -0.49
CMTM3-209ENST00000565003 COG2Q14746 738 aa12.02□□□□□ -0.49
CMTM3-209ENST00000565003 MAP3K21Q5TCX8 1036 aa12.02□□□□□ -0.49
CMTM3-209ENST00000565003 LPAR1Q92633 364 aa12.02□□□□□ -0.49
CMTM3-209ENST00000565003 SEC62Q99442 399 aaKnown RBP12.02□□□□□ -0.49
CMTM3-209ENST00000565003 APBA2Q99767 749 aa12.02□□□□□ -0.49
CMTM3-209ENST00000565003 FSD1Q9BTV5 496 aa12.02□□□□□ -0.49
CMTM3-209ENST00000565003 VCPKMTQ9H867 229 aa12.02□□□□□ -0.49
CMTM3-209ENST00000565003 CWC22Q9HCG8 908 aaKnown RBP12.02□□□□□ -0.49
CMTM3-209ENST00000565003 HMX1Q9NP08 348 aaPredicted RBP12.02□□□□□ -0.49
CMTM3-209ENST00000565003 PARP14Q460N5 1801 aa12.02□□□□□ -0.49
CMTM3-209ENST00000565003 CEP290O15078 2479 aa12.01□□□□□ -0.49
CMTM3-209ENST00000565003 MINDY4BA8MYZ0 360 aa12.01□□□□□ -0.49
CMTM3-209ENST00000565003 FLOT1O75955 427 aa12.01□□□□□ -0.49
CMTM3-209ENST00000565003 GNAT2P19087 354 aa12.01□□□□□ -0.49
CMTM3-209ENST00000565003 DSG3P32926 999 aa12.01□□□□□ -0.49
CMTM3-209ENST00000565003 TDO2P48775 406 aa12.01□□□□□ -0.49
CMTM3-209ENST00000565003 ATP2B2Q01814 1243 aa12.01□□□□□ -0.49
CMTM3-209ENST00000565003 HDAC1Q13547 482 aaPredicted RBP12.01□□□□□ -0.49
CMTM3-209ENST00000565003 ANKRD45Q5TZF3 282 aa12.01□□□□□ -0.49
CMTM3-209ENST00000565003 WDR78Q5VTH9 848 aa12.01□□□□□ -0.49
CMTM3-209ENST00000565003 DIS3LQ8TF46 1054 aaKnown RBP12.01□□□□□ -0.49
CMTM3-209ENST00000565003 DPF3Q92784 378 aa12.01□□□□□ -0.49
CMTM3-209ENST00000565003 GCC1Q96CN9 775 aa12.01□□□□□ -0.49
CMTM3-209ENST00000565003 ATG4CQ96DT6 458 aa12.01□□□□□ -0.49
CMTM3-209ENST00000565003 SH2D4AQ9H788 454 aa12.01□□□□□ -0.49
CMTM3-209ENST00000565003 KANSL2Q9H9L4 492 aa12.01□□□□□ -0.49
CMTM3-209ENST00000565003 FLRT1Q9NZU1 646 aa12.01□□□□□ -0.49
CMTM3-209ENST00000565003 SLC15A5A6NIM6 579 aa12□□□□□ -0.49
CMTM3-209ENST00000565003 WDR46O15213 610 aaKnown RBP12□□□□□ -0.49
CMTM3-209ENST00000565003 PTPREP23469 700 aa12□□□□□ -0.49
CMTM3-209ENST00000565003 CACNB2Q08289 660 aaPredicted RBP12□□□□□ -0.49
CMTM3-209ENST00000565003 GRB14Q14449 540 aa12□□□□□ -0.49
CMTM3-209ENST00000565003 LRRFIP1Q32MZ4 808 aaKnown RBP12□□□□□ -0.49
CMTM3-209ENST00000565003 ZMYM1Q5SVZ6 1142 aa12□□□□□ -0.49
CMTM3-209ENST00000565003 TRMT44Q8IYL2 757 aaKnown RBP12□□□□□ -0.49
CMTM3-209ENST00000565003 IFNL3Q8IZI9 196 aa12□□□□□ -0.49
CMTM3-209ENST00000565003 HTATIP2Q9BUP3 242 aa12□□□□□ -0.49
CMTM3-209ENST00000565003 MOV10L1Q9BXT6 1211 aaKnown RBP12□□□□□ -0.49
CMTM3-209ENST00000565003 SPATC1LQ9H0A9 340 aa12□□□□□ -0.49
CMTM3-209ENST00000565003 HOXC10Q9NYD6 342 aa12□□□□□ -0.49
CMTM3-209ENST00000565003 PATL2C9JE40 543 aaKnown RBP11.99□□□□□ -0.49
CMTM3-209ENST00000565003 PRDM1O75626 825 aa11.99□□□□□ -0.49
CMTM3-209ENST00000565003 APPP05067 770 aa11.99□□□□□ -0.49
CMTM3-209ENST00000565003 HOXC6P09630 235 aa11.99□□□□□ -0.49
CMTM3-209ENST00000565003 CAPN2P17655 700 aa11.99□□□□□ -0.49
CMTM3-209ENST00000565003 ERCC3P19447 782 aa11.99□□□□□ -0.49
CMTM3-209ENST00000565003 CCND3P30281 292 aaPredicted RBP11.99□□□□□ -0.49
CMTM3-209ENST00000565003 MNX1P50219 401 aaPredicted RBP11.99□□□□□ -0.49
CMTM3-209ENST00000565003 PDE1AP54750 535 aa11.99□□□□□ -0.49
CMTM3-209ENST00000565003 HABP4Q5JVS0 413 aaKnown RBP11.99□□□□□ -0.49
CMTM3-209ENST00000565003 SAMD1Q6SPF0 538 aaPredicted RBP11.99□□□□□ -0.49
CMTM3-209ENST00000565003 CCDC129Q6ZRS4 1044 aa11.99□□□□□ -0.49
CMTM3-209ENST00000565003 MB21D1Q8N884 522 aa11.99□□□□□ -0.49
CMTM3-209ENST00000565003 NPLOC4Q8TAT6 608 aa11.99□□□□□ -0.49
CMTM3-209ENST00000565003 PAWRQ96IZ0 340 aaKnown RBP11.99□□□□□ -0.49
CMTM3-209ENST00000565003 MKNK2Q9HBH9 465 aa11.99□□□□□ -0.49
CMTM3-209ENST00000565003 FBXO28Q9NVF7 368 aa11.99□□□□□ -0.49
CMTM3-209ENST00000565003 STAP2Q9UGK3 403 aa11.99□□□□□ -0.49
CMTM3-209ENST00000565003 OGDHLQ9ULD0 1010 aa11.99□□□□□ -0.49
CMTM3-209ENST00000565003 COLQQ9Y215 455 aaPredicted RBP11.99□□□□□ -0.49
CMTM3-209ENST00000565003 IVNS1ABPQ9Y6Y0 642 aa11.99□□□□□ -0.49
CMTM3-209ENST00000565003 ZNF236Q9UL36 1845 aa11.99□□□□□ -0.49
CMTM3-209ENST00000565003 ALPK3Q96L96 1907 aa11.98□□□□□ -0.49
CMTM3-209ENST00000565003 IGKV6D-41A0A0C4DH26 115 aa11.98□□□□□ -0.49
CMTM3-209ENST00000565003 FOXP2O15409 715 aa11.98□□□□□ -0.49
CMTM3-209ENST00000565003 RAD21O60216 631 aa11.98□□□□□ -0.49
CMTM3-209ENST00000565003 PLS1Q14651 629 aa11.98□□□□□ -0.49
CMTM3-209ENST00000565003 FAM83BQ5T0W9 1011 aa11.98□□□□□ -0.49
CMTM3-209ENST00000565003 ANKLE1Q8NAG6 615 aa11.98□□□□□ -0.49
CMTM3-209ENST00000565003 SHCBP1Q8NEM2 672 aa11.98□□□□□ -0.49
CMTM3-209ENST00000565003 GOPCQ9HD26 462 aa11.98□□□□□ -0.49
CMTM3-209ENST00000565003 ZBTB47Q9UFB7 747 aaPredicted RBP11.98□□□□□ -0.49
CMTM3-209ENST00000565003 COL11A1P12107 1806 aaPredicted RBP11.97□□□□□ -0.49
CMTM3-209ENST00000565003 IGHA2P01877 340 aa11.97□□□□□ -0.49
CMTM3-209ENST00000565003 ADORA2AP29274 412 aa11.97□□□□□ -0.49
CMTM3-209ENST00000565003 TMEM132BQ14DG7 1078 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms