RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 MTMR7Q9Y216 660 aa23.11■■□□□ 1.29
MAP1LC3B-206ENST00000564844 TTC26A0AVF1 554 aa23.11■■□□□ 1.29
MAP1LC3B-206ENST00000564844 COPB1P53618 953 aaKnown RBP23.11■■□□□ 1.29
MAP1LC3B-206ENST00000564844 EZH2Q15910 746 aaKnown RBP23.11■■□□□ 1.29
MAP1LC3B-206ENST00000564844 WHAMMP3Q1A5X7 153 aa23.11■■□□□ 1.29
MAP1LC3B-206ENST00000564844 SMCR8Q8TEV9 937 aaPredicted RBP23.11■■□□□ 1.29
MAP1LC3B-206ENST00000564844 GBP3Q9H0R5 595 aa23.11■■□□□ 1.29
MAP1LC3B-206ENST00000564844 GOLGB1Q14789 3259 aaKnown RBP23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 STIM1Q13586 685 aa23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 CDKAL1Q5VV42 579 aa23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 KIAA1328Q86T90 577 aa23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 IQUBQ8NA54 791 aa23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 SDR42E1Q8WUS8 393 aa23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 LOC102724159A0A0B4J2E5 919 aa23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 NDUFA10O95299 355 aa23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 DNA2P51530 1060 aa23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 SLC7A5Q01650 507 aa23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 PWP2Q15269 919 aaKnown RBP23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 KANK3Q6NY19 840 aa23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 TRIML1Q8N9V2 468 aa23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 IBSPP21815 317 aaPredicted RBP23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 MCM7P33993 719 aa23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 FANCBQ8NB91 859 aa23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 NELFBQ8WX92 580 aa23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 WASF1Q92558 559 aa23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 PCMTD1Q96MG8 357 aaPredicted RBP23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 SLC4A4Q9Y6R1 1079 aa23.1■■□□□ 1.29
MAP1LC3B-206ENST00000564844 CYP2D7A0A087X1C5 515 aa23.09■■□□□ 1.29
MAP1LC3B-206ENST00000564844 KCNJ18B7U540 433 aa23.09■■□□□ 1.29
MAP1LC3B-206ENST00000564844 KLK7P49862 253 aa23.09■■□□□ 1.29
MAP1LC3B-206ENST00000564844 PTGDRQ13258 359 aa23.09■■□□□ 1.29
MAP1LC3B-206ENST00000564844 KCNJ12Q14500 433 aa23.09■■□□□ 1.29
MAP1LC3B-206ENST00000564844 AKNAD1Q5T1N1 836 aa23.09■■□□□ 1.29
MAP1LC3B-206ENST00000564844 SGMS1Q86VZ5 419 aa23.09■■□□□ 1.29
MAP1LC3B-206ENST00000564844 TTLL11Q8NHH1 800 aa23.09■■□□□ 1.29
MAP1LC3B-206ENST00000564844 ACBD3Q9H3P7 528 aa23.09■■□□□ 1.29
MAP1LC3B-206ENST00000564844 HPCAL4Q9UM19 191 aa23.09■■□□□ 1.29
MAP1LC3B-206ENST00000564844 SRCAPQ6ZRS2 3230 aa23.09■■□□□ 1.29
MAP1LC3B-206ENST00000564844 LCORLQ8N3X6 602 aa23.09■■□□□ 1.29
MAP1LC3B-206ENST00000564844 CTAGE1Q96RT6 745 aa23.09■■□□□ 1.29
MAP1LC3B-206ENST00000564844 FOXP1Q9H334 677 aaPredicted RBP23.09■■□□□ 1.29
MAP1LC3B-206ENST00000564844 KAT14Q9H8E8 782 aa23.09■■□□□ 1.29
MAP1LC3B-206ENST00000564844 PLEKHA8P1O95397 391 aa23.08■■□□□ 1.29
MAP1LC3B-206ENST00000564844 DEXIO95424 95 aa23.08■■□□□ 1.29
MAP1LC3B-206ENST00000564844 AMPD2Q01433 879 aa23.08■■□□□ 1.29
MAP1LC3B-206ENST00000564844 ZNF654Q8IZM8 581 aa23.08■■□□□ 1.29
MAP1LC3B-206ENST00000564844 RASSF8Q8NHQ8 419 aa23.08■■□□□ 1.29
MAP1LC3B-206ENST00000564844 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.08■■□□□ 1.29
MAP1LC3B-206ENST00000564844 HDAC7Q8WUI4 952 aa23.08■■□□□ 1.29
MAP1LC3B-206ENST00000564844 LACRTQ9GZZ8 138 aa23.08■■□□□ 1.29
MAP1LC3B-206ENST00000564844 SAR1BQ9Y6B6 198 aa23.08■■□□□ 1.29
MAP1LC3B-206ENST00000564844 PDE2AO00408 941 aaPredicted RBP23.08■■□□□ 1.29
MAP1LC3B-206ENST00000564844 CXCR5P32302 372 aa23.08■■□□□ 1.29
MAP1LC3B-206ENST00000564844 CORO7P57737 925 aa23.08■■□□□ 1.29
MAP1LC3B-206ENST00000564844 RCCD1A6NED2 376 aa23.07■■□□□ 1.28
MAP1LC3B-206ENST00000564844 ADAMTS3O15072 1205 aa23.07■■□□□ 1.28
MAP1LC3B-206ENST00000564844 USP14P54578 494 aa23.07■■□□□ 1.28
MAP1LC3B-206ENST00000564844 HLFQ16534 295 aa23.07■■□□□ 1.28
MAP1LC3B-206ENST00000564844 RRP36Q96EU6 259 aaKnown RBP23.07■■□□□ 1.28
MAP1LC3B-206ENST00000564844 UBAC1Q9BSL1 405 aa23.07■■□□□ 1.28
MAP1LC3B-206ENST00000564844 EHD2Q9NZN4 543 aa23.07■■□□□ 1.28
MAP1LC3B-206ENST00000564844 VEGFAP15692 232 aaPredicted RBP23.07■■□□□ 1.28
MAP1LC3B-206ENST00000564844 TTF1Q15361 905 aaPredicted RBP23.07■■□□□ 1.28
MAP1LC3B-206ENST00000564844 FBXW10Q5XX13 1052 aa23.07■■□□□ 1.28
MAP1LC3B-206ENST00000564844 SPATA20Q8TB22 786 aa23.07■■□□□ 1.28
MAP1LC3B-206ENST00000564844 CEP131Q9UPN4 1083 aa23.07■■□□□ 1.28
MAP1LC3B-206ENST00000564844 JAKMIP2Q96AA8 810 aa23.07■■□□□ 1.28
MAP1LC3B-206ENST00000564844 RIPOR2Q9Y4F9 1068 aa23.07■■□□□ 1.28
MAP1LC3B-206ENST00000564844 PATL2C9JE40 543 aaKnown RBP23.06■■□□□ 1.28
MAP1LC3B-206ENST00000564844 SECISBP2LQ93073 1101 aaKnown RBP23.06■■□□□ 1.28
MAP1LC3B-206ENST00000564844 AGPAT5Q9NUQ2 364 aa23.06■■□□□ 1.28
MAP1LC3B-206ENST00000564844 XDHP47989 1333 aa23.06■■□□□ 1.28
MAP1LC3B-206ENST00000564844 GSG1L2A8MUP6 293 aa23.06■■□□□ 1.28
MAP1LC3B-206ENST00000564844 ZPR1O75312 459 aa23.06■■□□□ 1.28
MAP1LC3B-206ENST00000564844 PPFIA4O75335 1185 aa23.06■■□□□ 1.28
MAP1LC3B-206ENST00000564844 MTRQ99707 1265 aa23.06■■□□□ 1.28
MAP1LC3B-206ENST00000564844 SELENOOQ9BVL4 669 aa23.06■■□□□ 1.28
MAP1LC3B-206ENST00000564844 MKRN1Q9UHC7 482 aaKnown RBP23.06■■□□□ 1.28
MAP1LC3B-206ENST00000564844 RGPD5Q99666 1765 aa23.06■■□□□ 1.28
MAP1LC3B-206ENST00000564844 LIFRP42702 1097 aa23.05■■□□□ 1.28
MAP1LC3B-206ENST00000564844 SND1Q7KZF4 910 aaKnown RBP eCLIP23.05■■□□□ 1.28
MAP1LC3B-206ENST00000564844 KRT26Q7Z3Y9 468 aa23.05■■□□□ 1.28
MAP1LC3B-206ENST00000564844 MED4Q9NPJ6 270 aa23.05■■□□□ 1.28
MAP1LC3B-206ENST00000564844 PMS1P54277 932 aaKnown RBP23.05■■□□□ 1.28
MAP1LC3B-206ENST00000564844 PAK1Q13153 545 aa23.05■■□□□ 1.28
MAP1LC3B-206ENST00000564844 TCP11X2Q5H9J9 407 aa23.05■■□□□ 1.28
MAP1LC3B-206ENST00000564844 KCTD16Q68DU8 428 aa23.05■■□□□ 1.28
MAP1LC3B-206ENST00000564844 PIK3AP1Q6ZUJ8 805 aa23.05■■□□□ 1.28
MAP1LC3B-206ENST00000564844 PPM1EQ8WY54 764 aa23.05■■□□□ 1.28
MAP1LC3B-206ENST00000564844 PRDM11Q9NQV5 511 aa23.05■■□□□ 1.28
MAP1LC3B-206ENST00000564844 ABCF2Q9UG63 623 aa23.05■■□□□ 1.28
MAP1LC3B-206ENST00000564844 LUC7L2Q9Y383 392 aaKnown RBP23.05■■□□□ 1.28
MAP1LC3B-206ENST00000564844 WDR19Q8NEZ3 1342 aa23.04■■□□□ 1.28
MAP1LC3B-206ENST00000564844 GOLGA6CA6NDK9 693 aa23.04■■□□□ 1.28
MAP1LC3B-206ENST00000564844 PRPF6O94906 941 aaKnown RBP23.04■■□□□ 1.28
MAP1LC3B-206ENST00000564844 GOLGA6DP0CG33 693 aa23.04■■□□□ 1.28
MAP1LC3B-206ENST00000564844 PRCPP42785 496 aa23.04■■□□□ 1.28
MAP1LC3B-206ENST00000564844 HERVK_113P62684 666 aa23.04■■□□□ 1.28
MAP1LC3B-206ENST00000564844 TSR1Q2NL82 804 aaKnown RBP23.04■■□□□ 1.28
MAP1LC3B-206ENST00000564844 DNAJC10Q8IXB1 793 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms