RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 FCGRTP55899 365 aa11.81□□□□□ -0.52
CDH1-206ENST00000564676 CAP1Q01518 475 aa11.81□□□□□ -0.52
CDH1-206ENST00000564676 CTDSPL2Q05D32 466 aa11.81□□□□□ -0.52
CDH1-206ENST00000564676 USP17L24Q0WX57 530 aa11.81□□□□□ -0.52
CDH1-206ENST00000564676 P2RX7Q99572 595 aaKnown RBP11.81□□□□□ -0.52
CDH1-206ENST00000564676 PTPN22Q9Y2R2 807 aa11.81□□□□□ -0.52
CDH1-206ENST00000564676 RAD21O60216 631 aa11.8□□□□□ -0.52
CDH1-206ENST00000564676 GNRH1P01148 92 aa11.8□□□□□ -0.52
CDH1-206ENST00000564676 TSPY3P0CV98 308 aa11.8□□□□□ -0.52
CDH1-206ENST00000564676 TSPY8P0CW00 308 aa11.8□□□□□ -0.52
CDH1-206ENST00000564676 HERVK_113P62684 666 aa11.8□□□□□ -0.52
CDH1-206ENST00000564676 TFAP4Q01664 338 aa11.8□□□□□ -0.52
CDH1-206ENST00000564676 FAM110CQ1W6H9 321 aa11.8□□□□□ -0.52
CDH1-206ENST00000564676 FAM47AQ5JRC9 791 aa11.8□□□□□ -0.52
CDH1-206ENST00000564676 CATSPERGQ6ZRH7 1159 aa11.8□□□□□ -0.52
CDH1-206ENST00000564676 SIAH1Q8IUQ4 282 aa11.8□□□□□ -0.52
CDH1-206ENST00000564676 GTF3C2Q8WUA4 911 aaPredicted RBP11.8□□□□□ -0.52
CDH1-206ENST00000564676 RUFY2Q8WXA3 655 aa11.8□□□□□ -0.52
CDH1-206ENST00000564676 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDH1-206ENST00000564676 RPAP3Q9H6T3 665 aaPredicted RBP11.8□□□□□ -0.52
CDH1-206ENST00000564676 VCPKMTQ9H867 229 aa11.8□□□□□ -0.52
CDH1-206ENST00000564676 TOMM22Q9NS69 142 aa11.8□□□□□ -0.52
CDH1-206ENST00000564676 HPS5Q9UPZ3 1129 aa11.8□□□□□ -0.52
CDH1-206ENST00000564676 TMX2Q9Y320 296 aa11.8□□□□□ -0.52
CDH1-206ENST00000564676 RANBP6O60518 1105 aaKnown RBP11.79□□□□□ -0.52
CDH1-206ENST00000564676 CTGFP29279 349 aa11.79□□□□□ -0.52
CDH1-206ENST00000564676 HAND2P61296 217 aa11.79□□□□□ -0.52
CDH1-206ENST00000564676 RRP12Q5JTH9 1297 aaKnown RBP11.79□□□□□ -0.52
CDH1-206ENST00000564676 SPICE1Q8N0Z3 855 aa11.79□□□□□ -0.52
CDH1-206ENST00000564676 NEDD1Q8NHV4 660 aa11.79□□□□□ -0.52
CDH1-206ENST00000564676 LPAR1Q92633 364 aa11.79□□□□□ -0.52
CDH1-206ENST00000564676 TRIM47Q96LD4 638 aa11.79□□□□□ -0.52
CDH1-206ENST00000564676 PAGR1Q9BTK6 254 aa11.79□□□□□ -0.52
CDH1-206ENST00000564676 TANGO6Q9C0B7 1094 aa11.79□□□□□ -0.52
CDH1-206ENST00000564676 GOPCQ9HD26 462 aa11.79□□□□□ -0.52
CDH1-206ENST00000564676 INCENPQ9NQS7 918 aa11.79□□□□□ -0.52
CDH1-206ENST00000564676 NYAP2Q9P242 653 aa11.79□□□□□ -0.52
CDH1-206ENST00000564676 CLIP2Q9UDT6 1046 aa11.79□□□□□ -0.52
CDH1-206ENST00000564676 ANAPC4Q9UJX5 808 aa11.79□□□□□ -0.52
CDH1-206ENST00000564676 TSPY2A6NKD2 308 aa11.78□□□□□ -0.52
CDH1-206ENST00000564676 ZNF213O14771 459 aa11.78□□□□□ -0.52
CDH1-206ENST00000564676 TNPO2O14787 897 aaKnown RBP11.78□□□□□ -0.52
CDH1-206ENST00000564676 CHMLP26374 656 aa11.78□□□□□ -0.52
CDH1-206ENST00000564676 PRMT2P55345 433 aa11.78□□□□□ -0.52
CDH1-206ENST00000564676 KIAA1755Q5JYT7 1200 aa11.78□□□□□ -0.52
CDH1-206ENST00000564676 SKAP1Q86WV1 359 aa11.78□□□□□ -0.52
CDH1-206ENST00000564676 CCAR1Q8IX12 1150 aaKnown RBP11.78□□□□□ -0.52
CDH1-206ENST00000564676 GPRC5AQ8NFJ5 357 aa11.78□□□□□ -0.52
CDH1-206ENST00000564676 CEP95Q96GE4 821 aa11.78□□□□□ -0.52
CDH1-206ENST00000564676 DSCC1Q9BVC3 393 aa11.78□□□□□ -0.52
CDH1-206ENST00000564676 SRRDQ9UH36 339 aa11.78□□□□□ -0.52
CDH1-206ENST00000564676 CTNNA3Q9UI47 895 aa11.78□□□□□ -0.52
CDH1-206ENST00000564676 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.78□□□□□ -0.52
CDH1-206ENST00000564676 PTCH2Q9Y6C5 1203 aa11.78□□□□□ -0.52
CDH1-206ENST00000564676 ZMYM6O95789 1325 aa11.78□□□□□ -0.52
CDH1-206ENST00000564676 MYPNQ86TC9 1320 aa11.78□□□□□ -0.52
CDH1-206ENST00000564676 DOCK3Q8IZD9 2030 aa11.77□□□□□ -0.52
CDH1-206ENST00000564676 IGKV6D-41A0A0C4DH26 115 aa11.77□□□□□ -0.53
CDH1-206ENST00000564676 WDR46O15213 610 aaKnown RBP11.77□□□□□ -0.53
CDH1-206ENST00000564676 ORC4O43929 436 aa11.77□□□□□ -0.53
CDH1-206ENST00000564676 PEX10O60683 326 aa11.77□□□□□ -0.53
CDH1-206ENST00000564676 FLOT1O75955 427 aa11.77□□□□□ -0.53
CDH1-206ENST00000564676 TTLL1O95922 423 aa11.77□□□□□ -0.53
CDH1-206ENST00000564676 COG2Q14746 738 aa11.77□□□□□ -0.53
CDH1-206ENST00000564676 MFSD6Q6ZSS7 791 aa11.77□□□□□ -0.53
CDH1-206ENST00000564676 RAET1EQ8TD07 263 aa11.77□□□□□ -0.53
CDH1-206ENST00000564676 COA7Q96BR5 231 aa11.77□□□□□ -0.53
CDH1-206ENST00000564676 RNF41Q9H4P4 317 aaPredicted RBP11.77□□□□□ -0.53
CDH1-206ENST00000564676 TXNRD2Q9NNW7 524 aa11.77□□□□□ -0.53
CDH1-206ENST00000564676 MTMR4Q9NYA4 1195 aa11.77□□□□□ -0.53
CDH1-206ENST00000564676 HOXC10Q9NYD6 342 aa11.77□□□□□ -0.53
CDH1-206ENST00000564676 RBPJLQ9UBG7 517 aa11.77□□□□□ -0.53
CDH1-206ENST00000564676 MORF4L1Q9UBU8 362 aa11.77□□□□□ -0.53
CDH1-206ENST00000564676 RAD50Q92878 1312 aa11.77□□□□□ -0.53
CDH1-206ENST00000564676 ZSWIM8A7E2V4 1837 aa11.76□□□□□ -0.53
CDH1-206ENST00000564676 SPDYE16A6NNV3 312 aaPredicted RBP11.76□□□□□ -0.53
CDH1-206ENST00000564676 F5H6K3 240 aa11.76□□□□□ -0.53
CDH1-206ENST00000564676 FGRP09769 529 aa11.76□□□□□ -0.53
CDH1-206ENST00000564676 PCP11498 1178 aaKnown RBP11.76□□□□□ -0.53
CDH1-206ENST00000564676 ERVK-9P63128 1117 aa11.76□□□□□ -0.53
CDH1-206ENST00000564676 ERVK-24P63145 666 aa11.76□□□□□ -0.53
CDH1-206ENST00000564676 PRKCZQ05513 592 aa11.76□□□□□ -0.53
CDH1-206ENST00000564676 KLRC3Q07444 240 aa11.76□□□□□ -0.53
CDH1-206ENST00000564676 IMMTQ16891 758 aaKnown RBP11.76□□□□□ -0.53
CDH1-206ENST00000564676 Q3C1V9 767 aa11.76□□□□□ -0.53
CDH1-206ENST00000564676 SLC9C1Q4G0N8 1177 aa11.76□□□□□ -0.53
CDH1-206ENST00000564676 PPP4R3BQ5MIZ7 849 aa11.76□□□□□ -0.53
CDH1-206ENST00000564676 AKNAD1Q5T1N1 836 aa11.76□□□□□ -0.53
CDH1-206ENST00000564676 LRRC47Q8N1G4 583 aaKnown RBP11.76□□□□□ -0.53
CDH1-206ENST00000564676 IL25Q9H293 177 aa11.76□□□□□ -0.53
CDH1-206ENST00000564676 CWC22Q9HCG8 908 aaKnown RBP11.76□□□□□ -0.53
CDH1-206ENST00000564676 RABGAP1Q9Y3P9 1069 aa11.76□□□□□ -0.53
CDH1-206ENST00000564676 TACC3Q9Y6A5 838 aa11.76□□□□□ -0.53
CDH1-206ENST00000564676 PLIN4Q96Q06 1357 aa11.76□□□□□ -0.53
CDH1-206ENST00000564676 MGAMO43451 1857 aa11.76□□□□□ -0.53
CDH1-206ENST00000564676 NDUFB10O96000 172 aa11.75□□□□□ -0.53
CDH1-206ENST00000564676 FLT3LGP49771 235 aa11.75□□□□□ -0.53
CDH1-206ENST00000564676 CCNA1P78396 465 aa11.75□□□□□ -0.53
CDH1-206ENST00000564676 FAM83BQ5T0W9 1011 aa11.75□□□□□ -0.53
CDH1-206ENST00000564676 ERICH6BQ5W0A0 696 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms