RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 TNNT2P45379 298 aaPredicted RBP7.02□□□□□ -1.29
CHD9-210ENST00000564582 MRE11P49959 708 aa7.02□□□□□ -1.29
CHD9-210ENST00000564582 CHMP4BP1P59074 171 aa7.02□□□□□ -1.29
CHD9-210ENST00000564582 MSMPQ1L6U9 139 aa7.02□□□□□ -1.29
CHD9-210ENST00000564582 C9orf131Q5VYM1 1079 aa7.02□□□□□ -1.29
CHD9-210ENST00000564582 GK5Q6ZS86 529 aa7.02□□□□□ -1.29
CHD9-210ENST00000564582 NBPF11Q86T75 865 aa7.02□□□□□ -1.29
CHD9-210ENST00000564582 NGEFQ8N5V2 710 aa7.02□□□□□ -1.29
CHD9-210ENST00000564582 CYB5D2Q8WUJ1 264 aa7.02□□□□□ -1.29
CHD9-210ENST00000564582 TGIF2Q9GZN2 237 aa7.02□□□□□ -1.29
CHD9-210ENST00000564582 CCSER2Q9H7U1 834 aa7.02□□□□□ -1.29
CHD9-210ENST00000564582 ZC3H7BQ9UGR2 993 aaKnown RBP7.02□□□□□ -1.29
CHD9-210ENST00000564582 LAS1LQ9Y4W2 734 aaKnown RBP7.02□□□□□ -1.29
CHD9-210ENST00000564582 EIF3AQ14152 1382 aaKnown RBP7.02□□□□□ -1.29
CHD9-210ENST00000564582 FYCO1Q9BQS8 1478 aa7.02□□□□□ -1.29
CHD9-210ENST00000564582 EFCAB5A4FU69 1503 aa7.01□□□□□ -1.29
CHD9-210ENST00000564582 GOLGA6L3A6NEY3 463 aa7.01□□□□□ -1.29
CHD9-210ENST00000564582 EOMESO95936 686 aa7.01□□□□□ -1.29
CHD9-210ENST00000564582 IMPDH2P12268 514 aa7.01□□□□□ -1.29
CHD9-210ENST00000564582 COL9A2Q14055 689 aaPredicted RBP7.01□□□□□ -1.29
CHD9-210ENST00000564582 IFI16Q16666 785 aaKnown RBP7.01□□□□□ -1.29
CHD9-210ENST00000564582 LRRFIP1Q32MZ4 808 aaKnown RBP7.01□□□□□ -1.29
CHD9-210ENST00000564582 SFRP5Q5T4F7 317 aa7.01□□□□□ -1.29
CHD9-210ENST00000564582 VSIG10LQ86VR7 867 aa7.01□□□□□ -1.29
CHD9-210ENST00000564582 PHACTR4Q8IZ21 702 aa7.01□□□□□ -1.29
CHD9-210ENST00000564582 STK11IPQ8N1F8 1099 aa7.01□□□□□ -1.29
CHD9-210ENST00000564582 Q8N3U1 123 aa7.01□□□□□ -1.29
CHD9-210ENST00000564582 FAM181AQ8N9Y4 354 aa7.01□□□□□ -1.29
CHD9-210ENST00000564582 ANP32BQ92688 251 aaKnown RBP7.01□□□□□ -1.29
CHD9-210ENST00000564582 MISP3Q96FF7 219 aa7.01□□□□□ -1.29
CHD9-210ENST00000564582 EHMT1Q9H9B1 1298 aa7.01□□□□□ -1.29
CHD9-210ENST00000564582 UPF2Q9HAU5 1272 aaKnown RBP7.01□□□□□ -1.29
CHD9-210ENST00000564582 GMIPQ9P107 970 aa7.01□□□□□ -1.29
CHD9-210ENST00000564582 RCAN3Q9UKA8 241 aa7.01□□□□□ -1.29
CHD9-210ENST00000564582 TMEM265A0A087WTH1 108 aa7□□□□□ -1.29
CHD9-210ENST00000564582 MED26O95402 600 aa7□□□□□ -1.29
CHD9-210ENST00000564582 WNT11O96014 354 aa7□□□□□ -1.29
CHD9-210ENST00000564582 ITIH2P19823 946 aa7□□□□□ -1.29
CHD9-210ENST00000564582 TNNI2P48788 182 aa7□□□□□ -1.29
CHD9-210ENST00000564582 OXCT1P55809 520 aa7□□□□□ -1.29
CHD9-210ENST00000564582 PAK2Q13177 524 aa7□□□□□ -1.29
CHD9-210ENST00000564582 SKOR2Q2VWA4 1001 aaPredicted RBP7□□□□□ -1.29
CHD9-210ENST00000564582 NPM2Q86SE8 214 aaKnown RBP7□□□□□ -1.29
CHD9-210ENST00000564582 TRIM44Q96DX7 344 aaPredicted RBP7□□□□□ -1.29
CHD9-210ENST00000564582 CCDC74BQ96LY2 380 aa7□□□□□ -1.29
CHD9-210ENST00000564582 HEXIM2Q96MH2 286 aaKnown RBP7□□□□□ -1.29
CHD9-210ENST00000564582 NAP1L5Q96NT1 182 aaPredicted RBP7□□□□□ -1.29
CHD9-210ENST00000564582 CEP131Q9UPN4 1083 aa7□□□□□ -1.29
CHD9-210ENST00000564582 CASKIN1Q8WXD9 1431 aa7□□□□□ -1.29
CHD9-210ENST00000564582 CFAP43Q8NDM7 1665 aa7□□□□□ -1.29
CHD9-210ENST00000564582 KIF15Q9NS87 1388 aa6.99□□□□□ -1.29
CHD9-210ENST00000564582 UPK3BL1B0FP48 263 aa6.99□□□□□ -1.29
CHD9-210ENST00000564582 FAM155AB1AL88 458 aaPredicted RBP6.99□□□□□ -1.29
CHD9-210ENST00000564582 UPK3BL2E5RIL1 263 aa6.99□□□□□ -1.29
CHD9-210ENST00000564582 PRNPP04156 253 aa6.99□□□□□ -1.29
CHD9-210ENST00000564582 RAG1P15918 1043 aa6.99□□□□□ -1.29
CHD9-210ENST00000564582 ERCC5P28715 1186 aaPredicted RBP6.99□□□□□ -1.29
CHD9-210ENST00000564582 KIR3DL1P43629 444 aa6.99□□□□□ -1.29
CHD9-210ENST00000564582 TAF3Q5VWG9 929 aa6.99□□□□□ -1.29
CHD9-210ENST00000564582 C22orf34Q6ZV56 151 aa6.99□□□□□ -1.29
CHD9-210ENST00000564582 FAM214BQ7L5A3 538 aa6.99□□□□□ -1.29
CHD9-210ENST00000564582 CDH24Q86UP0 819 aa6.99□□□□□ -1.29
CHD9-210ENST00000564582 PLD6Q8N2A8 252 aaKnown RBP6.99□□□□□ -1.29
CHD9-210ENST00000564582 MFSD4AQ8N468 514 aa6.99□□□□□ -1.29
CHD9-210ENST00000564582 GPRASP2Q96D09 838 aa6.99□□□□□ -1.29
CHD9-210ENST00000564582 FGD6Q6ZV73 1430 aa6.99□□□□□ -1.29
CHD9-210ENST00000564582 MAPK8IP3Q9UPT6 1336 aa6.99□□□□□ -1.29
CHD9-210ENST00000564582 POLR1AO95602 1720 aaPredicted RBP6.98□□□□□ -1.29
CHD9-210ENST00000564582 LRPPRCP42704 1394 aaKnown RBP6.98□□□□□ -1.29
CHD9-210ENST00000564582 CHURC1-FNTBB4DL54 471 aa6.98□□□□□ -1.29
CHD9-210ENST00000564582 GBP1P32455 592 aa6.98□□□□□ -1.29
CHD9-210ENST00000564582 CLCN7P51798 805 aa6.98□□□□□ -1.29
CHD9-210ENST00000564582 CLCQ05315 142 aa6.98□□□□□ -1.29
CHD9-210ENST00000564582 HS1BP3Q53T59 392 aa6.98□□□□□ -1.29
CHD9-210ENST00000564582 RIN3Q8TB24 985 aa6.98□□□□□ -1.29
CHD9-210ENST00000564582 PNISRQ8TF01 805 aaKnown RBP6.98□□□□□ -1.29
CHD9-210ENST00000564582 HRASLS5Q96KN8 279 aa6.98□□□□□ -1.29
CHD9-210ENST00000564582 FBXL18Q96ME1 805 aa6.98□□□□□ -1.29
CHD9-210ENST00000564582 FERD3LQ96RJ6 166 aa6.98□□□□□ -1.29
CHD9-210ENST00000564582 MYH16Q9H6N6 1097 aa6.98□□□□□ -1.29
CHD9-210ENST00000564582 CCDC39Q9UFE4 941 aa6.98□□□□□ -1.29
CHD9-210ENST00000564582 SLC5A6Q9Y289 635 aa6.98□□□□□ -1.29
CHD9-210ENST00000564582 INPP5FQ9Y2H2 1132 aa6.98□□□□□ -1.29
CHD9-210ENST00000564582 SNX11Q9Y5W9 270 aa6.98□□□□□ -1.29
CHD9-210ENST00000564582 SCAPERQ9BY12 1400 aa6.98□□□□□ -1.29
CHD9-210ENST00000564582 NINLQ9Y2I6 1382 aa6.97□□□□□ -1.29
CHD9-210ENST00000564582 SLC22A31A6NKX4 558 aa6.97□□□□□ -1.29
CHD9-210ENST00000564582 ZNF865P0CJ78 1059 aaPredicted RBP6.97□□□□□ -1.29
CHD9-210ENST00000564582 PRKCQQ04759 706 aa6.97□□□□□ -1.29
CHD9-210ENST00000564582 GNL2Q13823 731 aaKnown RBP6.97□□□□□ -1.29
CHD9-210ENST00000564582 ARSHQ5FYA8 562 aa6.97□□□□□ -1.29
CHD9-210ENST00000564582 OVOS1Q6IE37 1185 aa6.97□□□□□ -1.29
CHD9-210ENST00000564582 NLRC3Q7RTR2 1065 aa6.97□□□□□ -1.29
CHD9-210ENST00000564582 TMEM40Q8WWA1 233 aa6.97□□□□□ -1.29
CHD9-210ENST00000564582 VAV3Q9UKW4 847 aa6.97□□□□□ -1.29
CHD9-210ENST00000564582 ZNRF3Q9ULT6 936 aa6.97□□□□□ -1.29
CHD9-210ENST00000564582 MYBBP1AQ9BQG0 1328 aaKnown RBP6.97□□□□□ -1.29
CHD9-210ENST00000564582 SPATA31E1Q6ZUB1 1445 aa6.96□□□□□ -1.3
CHD9-210ENST00000564582 CBX7O95931 251 aa6.96□□□□□ -1.3
CHD9-210ENST00000564582 CCNFP41002 786 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms